Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209695822
Identifier: 209695822
GI number: 209695822
Start: 2566806
End: 2568068
Strand: Reverse
Name: 209695822
Synonym: VSAL_I2397
Alternate gene names: NA
Gene position: 2568068-2566806 (Counterclockwise)
Preceding gene: 209695823
Following gene: 209695821
Centisome position: 77.23
GC content: 37.93
Gene sequence:
>1263_bases ATGTGGCGGTTATTGATAATTGCACTTTTTGTACCGATAGTGAGTTGGGCAAAGAGCACCGAAATGTCGTGGTTGGACAA CCGCTTTAGAGTTGATCCTACGATTAAGCAAGTGTCATTTTTAGTTCATAGAGAGAGAGCCTATCAAGCCGTTACTCTTG TGCGTCCTGATGGAACAAAATATTACGCATGGAAACACCCAGATAACGTGGCGTGGTATGAAGAAAATGGCATGGATATT ATCTCTATTGAGAATCCTATGCCTGGACCATGGCAAGCGATAGGTAAAGTAACACCGGATAATAAGATAAAAATTCTATC TAATTTAACGCTGAACGTAGATTCGTTACCAAAAAAATTATATCAATCTGAAAGTTTAAAATTTACGGCTCGTTTACTTG AAGATGGAAAACCATTGGTATTACGAGAGTTTTTAAACCGTATCAAATTGAATGTGACGTTTACGCCTTATCTTGCGAAT GAAAAAGATCTAGTTAAAGAAGCTCGCCCATTGGCTGAAGTATTAGGTACGTTTGAAGATAATGGTGAAGATCTCGATGA AGTGGCTGCTGACGGTATTTTTACTGTTAACTTACCAATAAAGATAAAACCGGGTAAATATTGGGTTCGTATTCAATCGC GTAATGGTGTTTTCTTGAGAACGGTAGAGCAAGATGTCTTGGTTTATCCTGCTCCTATTCGAGCAACTTTTACTCAAGCT CGTGATGACAGTACAAAGCATTCAATGAACATTGATACTGAAGCTGGAGTGATTAAAGCGGGATCGTTAGCGGCTCATAT TGAACAATTTAATCCAAAAGATCGCAAAACAGTAACTGAAGCACAATCTGAAAAAGACGAATCAAAGCTTTATTTTTCGT TGCCTAATGATTATATGTCCGGAAAAAACAGTTGGACAGGTTGGGTATACGCAACAGATAAGGCAACGAGTCGACCATTG CAATTTTACCTTGGCTTGCACAATTATGGGGTGACAGAGCCGATTGATTTAAAAGCGGCTTATGAAGCACGAGTAAAAGA AGCGGCAATACAACGTAAAATAGAAGAAGAAAAAAGACTTGAAGAAGAAAGAGCGACTGCTCGTCAACATTTTTGGGTTT ACGTTATTGTTGGAAATATAGTTATTATATTGTTAATTTTTGGCGGTATTTTTGGGTGGAAGAAATTTAAATTGCTGAAA GAGAAAAAAGCATTTGCCCCTAAATCTGAAAAATTAACAATGCCGCCACCGCCTAAAGTATAA
Upstream 100 bases:
>100_bases TTAAAGGTTTTACGTGCAACGGCCGATGAATTAGAAGCGCATGAAAAGCGCTTGGATATCGTTGGTGATGCCTGTTTGTG GCGTAATTAGGAGTTTTAGT
Downstream 100 bases:
>100_bases AATACTTGAGTAATAAGAAAAAACCGCAGTTATGGCGGTTTTTTATTTATCAAGGCCTTTTTTGTAGCTTTTTGTTACAT TTATCCAGAAGTTAACGATT
Product: hypothetical protein
Products: L-glutamine; 2-oxoglutarate; reduced ferredoxin
Alternate protein names: Ferredoxin-Dependent Glutamate Synthase; Von Willebrand Factor Type A Domain-Containing Protein; Von Willebrand Factor Type A Domain Protein
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MWRLLIIALFVPIVSWAKSTEMSWLDNRFRVDPTIKQVSFLVHRERAYQAVTLVRPDGTKYYAWKHPDNVAWYEENGMDI ISIENPMPGPWQAIGKVTPDNKIKILSNLTLNVDSLPKKLYQSESLKFTARLLEDGKPLVLREFLNRIKLNVTFTPYLAN EKDLVKEARPLAEVLGTFEDNGEDLDEVAADGIFTVNLPIKIKPGKYWVRIQSRNGVFLRTVEQDVLVYPAPIRATFTQA RDDSTKHSMNIDTEAGVIKAGSLAAHIEQFNPKDRKTVTEAQSEKDESKLYFSLPNDYMSGKNSWTGWVYATDKATSRPL QFYLGLHNYGVTEPIDLKAAYEARVKEAAIQRKIEEEKRLEEERATARQHFWVYVIVGNIVIILLIFGGIFGWKKFKLLK EKKAFAPKSEKLTMPPPPKV
Sequences:
>Translated_420_residues MWRLLIIALFVPIVSWAKSTEMSWLDNRFRVDPTIKQVSFLVHRERAYQAVTLVRPDGTKYYAWKHPDNVAWYEENGMDI ISIENPMPGPWQAIGKVTPDNKIKILSNLTLNVDSLPKKLYQSESLKFTARLLEDGKPLVLREFLNRIKLNVTFTPYLAN EKDLVKEARPLAEVLGTFEDNGEDLDEVAADGIFTVNLPIKIKPGKYWVRIQSRNGVFLRTVEQDVLVYPAPIRATFTQA RDDSTKHSMNIDTEAGVIKAGSLAAHIEQFNPKDRKTVTEAQSEKDESKLYFSLPNDYMSGKNSWTGWVYATDKATSRPL QFYLGLHNYGVTEPIDLKAAYEARVKEAAIQRKIEEEKRLEEERATARQHFWVYVIVGNIVIILLIFGGIFGWKKFKLLK EKKAFAPKSEKLTMPPPPKV >Mature_420_residues MWRLLIIALFVPIVSWAKSTEMSWLDNRFRVDPTIKQVSFLVHRERAYQAVTLVRPDGTKYYAWKHPDNVAWYEENGMDI ISIENPMPGPWQAIGKVTPDNKIKILSNLTLNVDSLPKKLYQSESLKFTARLLEDGKPLVLREFLNRIKLNVTFTPYLAN EKDLVKEARPLAEVLGTFEDNGEDLDEVAADGIFTVNLPIKIKPGKYWVRIQSRNGVFLRTVEQDVLVYPAPIRATFTQA RDDSTKHSMNIDTEAGVIKAGSLAAHIEQFNPKDRKTVTEAQSEKDESKLYFSLPNDYMSGKNSWTGWVYATDKATSRPL QFYLGLHNYGVTEPIDLKAAYEARVKEAAIQRKIEEEKRLEEERATARQHFWVYVIVGNIVIILLIFGGIFGWKKFKLLK EKKAFAPKSEKLTMPPPPKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.4.7.1
Molecular weight: Translated: 48118; Mature: 48118
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRLLIIALFVPIVSWAKSTEMSWLDNRFRVDPTIKQVSFLVHRERAYQAVTLVRPDGTK CHHHHHHHHHHHHHHHHCCCCHHHHCCCEECCCHHHHHHHHHHHHHCEEEEEEECCCCCE YYAWKHPDNVAWYEENGMDIISIENPMPGPWQAIGKVTPDNKIKILSNLTLNVDSLPKKL EEEEECCCCEEEEECCCCEEEEECCCCCCCHHHHCCCCCCCCEEEEEECEECHHHHHHHH YQSESLKFTARLLEDGKPLVLREFLNRIKLNVTFTPYLANEKDLVKEARPLAEVLGTFED HHCCCHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCC NGEDLDEVAADGIFTVNLPIKIKPGKYWVRIQSRNGVFLRTVEQDVLVYPAPIRATFTQA CCCCHHHHHCCCEEEEEEEEEEECCEEEEEEECCCCEEEEEECCCEEEECCCCHHHHHHC RDDSTKHSMNIDTEAGVIKAGSLAAHIEQFNPKDRKTVTEAQSEKDESKLYFSLPNDYMS CCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCHHHC GKNSWTGWVYATDKATSRPLQFYLGLHNYGVTEPIDLKAAYEARVKEAAIQRKIEEEKRL CCCCCEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EEERATARQHFWVYVIVGNIVIILLIFGGIFGWKKFKLLKEKKAFAPKSEKLTMPPPPKV HHHHHHHHHHEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MWRLLIIALFVPIVSWAKSTEMSWLDNRFRVDPTIKQVSFLVHRERAYQAVTLVRPDGTK CHHHHHHHHHHHHHHHHCCCCHHHHCCCEECCCHHHHHHHHHHHHHCEEEEEEECCCCCE YYAWKHPDNVAWYEENGMDIISIENPMPGPWQAIGKVTPDNKIKILSNLTLNVDSLPKKL EEEEECCCCEEEEECCCCEEEEECCCCCCCHHHHCCCCCCCCEEEEEECEECHHHHHHHH YQSESLKFTARLLEDGKPLVLREFLNRIKLNVTFTPYLANEKDLVKEARPLAEVLGTFED HHCCCHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCC NGEDLDEVAADGIFTVNLPIKIKPGKYWVRIQSRNGVFLRTVEQDVLVYPAPIRATFTQA CCCCHHHHHCCCEEEEEEEEEEECCEEEEEEECCCCEEEEEECCCEEEECCCCHHHHHHC RDDSTKHSMNIDTEAGVIKAGSLAAHIEQFNPKDRKTVTEAQSEKDESKLYFSLPNDYMS CCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCHHHC GKNSWTGWVYATDKATSRPLQFYLGLHNYGVTEPIDLKAAYEARVKEAAIQRKIEEEKRL CCCCCEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EEERATARQHFWVYVIVGNIVIILLIFGGIFGWKKFKLLKEKKAFAPKSEKLTMPPPPKV HHHHHHHHHHEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; oxidized ferredoxin
Specific reaction: 2 L-glutamate + 2 oxidized ferredoxin = L-glutamine + 2-oxoglutarate + 2 reduced ferredoxin
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA