Click here to switch to the map view.

The map label for this gene is torT [H]

Identifier: 209695573

GI number: 209695573

Start: 2281368

End: 2282363

Strand: Direct

Name: torT [H]

Synonym: VSAL_I2132

Alternate gene names: 209695573

Gene position: 2281368-2282363 (Clockwise)

Preceding gene: 209695570

Following gene: 209695574

Centisome position: 68.61

GC content: 39.46

Gene sequence:

>996_bases
ATGAAGATCAAAGCAATCTCCCTATTTATTACCTTGATTTCAATACTGTTATCCCCTCTATCTTACGCTAAAGCGCCTTG
GAAGATTTGTGCCATCTATCCGCATTTAAAAGATTCTTATTGGTTGTCTATCAACTATGGCATGGTTGAAGAGGCAAAAC
GCAATAATGTCGAATTAACCGTTTATGAATCTGGTGGTTATCCCAATATTGATCGCCAAAAAGAACAAATTAAACAATGT
ATTGAAATAGGCTCTAACGCCATTTTATTAGGTACGGTTGATCCTATCGCCTATCAAGATAATTTCAGACAATTGACTCA
AGGTATCCCAACATTTGCAACAGTAAACCAACTGAAAAGCTCAACAGGTAAATTACCCCCTCTTCATTTTGGTGAAGTCG
GTGTTGATTGGTATGACATGGGTTATCAAGCCGGGGCTTTCTTAGCCAAGCTGCATCCTAGAGATTCAGGTATTGTTCAT
ATTGGTTGGCTACCTGGGCCTAAAACCCGAGGCGGTACAAAGCCGGTAACAAAAGGGTTTTATGATGCAATTAAAAACAG
TGATGTCATTGTCAGTGCGACTTATTGGGGCGATAACAGCAAAGAATTACAACGTAATTTAATACAAGATGCGCTTGAAA
ACGAAAAATTGGATTACCTTGTCGGTGGTGCCGTTGCTATTGAAGTCGCTATTAGCGAGCTTGCTAGTCGAAAAATGCAA
GACGACGTTGGTTTAATATCGACGTATTTAAGTCATGCAGTTTATCGTGGGCTACTTCGTAATAAAGTTCTCTTTTCTCC
GACAGATAAAATGGTATTACAAGGCCGACTTAGTGTTCAACAGGCGATTGGATACTTAGAAAACCAACCGTTGCCGTTTG
CTCTATCACCCAAAATTGAAGCACTAACCCCAAATCATTTACCAAAACGAGTACTATTAGATTCTCTTTCGCCAGCAGAA
TATCGTCCAACTTTTTTTGTGGGCGCAAAAAAATAA

Upstream 100 bases:

>100_bases
CCTATGCCTGTAGAAGAAAATAACATAATCTGGAATACACTTTGGAAAAAGGAGTAATGCAGGTATCATATCACCAACCT
AAAGCCAGTGCGAAGATACC

Downstream 100 bases:

>100_bases
AGGCTATTGTCATCATTTATAAGATGAAAAAATACGGCACTAATAATAAAAATAAGGAACATTGATGAAGAAAACAACGC
GTATCGTACCGGCACATAAA

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKIKAISLFITLISILLSPLSYAKAPWKICAIYPHLKDSYWLSINYGMVEEAKRNNVELTVYESGGYPNIDRQKEQIKQC
IEIGSNAILLGTVDPIAYQDNFRQLTQGIPTFATVNQLKSSTGKLPPLHFGEVGVDWYDMGYQAGAFLAKLHPRDSGIVH
IGWLPGPKTRGGTKPVTKGFYDAIKNSDVIVSATYWGDNSKELQRNLIQDALENEKLDYLVGGAVAIEVAISELASRKMQ
DDVGLISTYLSHAVYRGLLRNKVLFSPTDKMVLQGRLSVQQAIGYLENQPLPFALSPKIEALTPNHLPKRVLLDSLSPAE
YRPTFFVGAKK

Sequences:

>Translated_331_residues
MKIKAISLFITLISILLSPLSYAKAPWKICAIYPHLKDSYWLSINYGMVEEAKRNNVELTVYESGGYPNIDRQKEQIKQC
IEIGSNAILLGTVDPIAYQDNFRQLTQGIPTFATVNQLKSSTGKLPPLHFGEVGVDWYDMGYQAGAFLAKLHPRDSGIVH
IGWLPGPKTRGGTKPVTKGFYDAIKNSDVIVSATYWGDNSKELQRNLIQDALENEKLDYLVGGAVAIEVAISELASRKMQ
DDVGLISTYLSHAVYRGLLRNKVLFSPTDKMVLQGRLSVQQAIGYLENQPLPFALSPKIEALTPNHLPKRVLLDSLSPAE
YRPTFFVGAKK
>Mature_331_residues
MKIKAISLFITLISILLSPLSYAKAPWKICAIYPHLKDSYWLSINYGMVEEAKRNNVELTVYESGGYPNIDRQKEQIKQC
IEIGSNAILLGTVDPIAYQDNFRQLTQGIPTFATVNQLKSSTGKLPPLHFGEVGVDWYDMGYQAGAFLAKLHPRDSGIVH
IGWLPGPKTRGGTKPVTKGFYDAIKNSDVIVSATYWGDNSKELQRNLIQDALENEKLDYLVGGAVAIEVAISELASRKMQ
DDVGLISTYLSHAVYRGLLRNKVLFSPTDKMVLQGRLSVQQAIGYLENQPLPFALSPKIEALTPNHLPKRVLLDSLSPAE
YRPTFFVGAKK

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=311, Percent_Identity=41.1575562700965, Blast_Score=211, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36770; Mature: 36770

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKAISLFITLISILLSPLSYAKAPWKICAIYPHLKDSYWLSINYGMVEEAKRNNVELT
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCHHHHHHCCCEEEE
VYESGGYPNIDRQKEQIKQCIEIGSNAILLGTVDPIAYQDNFRQLTQGIPTFATVNQLKS
EECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHH
STGKLPPLHFGEVGVDWYDMGYQAGAFLAKLHPRDSGIVHIGWLPGPKTRGGTKPVTKGF
HCCCCCCCCCCCCCCCHHHCCCHHCHHHEEECCCCCCEEEEECCCCCCCCCCCCCHHHHH
YDAIKNSDVIVSATYWGDNSKELQRNLIQDALENEKLDYLVGGAVAIEVAISELASRKMQ
HHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHH
DDVGLISTYLSHAVYRGLLRNKVLFSPTDKMVLQGRLSVQQAIGYLENQPLPFALSPKIE
HHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCE
ALTPNHLPKRVLLDSLSPAEYRPTFFVGAKK
ECCCCCCCHHHHHHCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MKIKAISLFITLISILLSPLSYAKAPWKICAIYPHLKDSYWLSINYGMVEEAKRNNVELT
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCHHHHHHCCCEEEE
VYESGGYPNIDRQKEQIKQCIEIGSNAILLGTVDPIAYQDNFRQLTQGIPTFATVNQLKS
EECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHH
STGKLPPLHFGEVGVDWYDMGYQAGAFLAKLHPRDSGIVHIGWLPGPKTRGGTKPVTKGF
HCCCCCCCCCCCCCCCHHHCCCHHCHHHEEECCCCCCEEEEECCCCCCCCCCCCCHHHHH
YDAIKNSDVIVSATYWGDNSKELQRNLIQDALENEKLDYLVGGAVAIEVAISELASRKMQ
HHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHH
DDVGLISTYLSHAVYRGLLRNKVLFSPTDKMVLQGRLSVQQAIGYLENQPLPFALSPKIE
HHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCE
ALTPNHLPKRVLLDSLSPAEYRPTFFVGAKK
ECCCCCCCHHHHHHCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]