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The map label for this gene is yccT [C]

Identifier: 209695570

GI number: 209695570

Start: 2275921

End: 2276547

Strand: Direct

Name: yccT [C]

Synonym: VSAL_I2129

Alternate gene names: 209695570

Gene position: 2275921-2276547 (Clockwise)

Preceding gene: 209695569

Following gene: 209695573

Centisome position: 68.45

GC content: 34.77

Gene sequence:

>627_bases
ATGAAATTTCACTCTTTTCTTGCTGCTGGCTTATGTCTTCTAACCTCATTAAGTGCCTCTGCCTCAATTCAGTTAACCGT
TCCAAGTGAAGTAGAACTCCTTTTAGTTGATAGCCAAGAAGTCAAACTTGATAGCTCTTTCTTCTCAACGACATCAACAC
TTAAGCTGGACGATGGCGAACATCAAATTGTGTTCAGATACAATCCAGTATTTAAGCAAGGTAAAGACAACATTATAGTC
TCGAGTGATATTATTGTTTCAAAGTTTACCGCAACCAACCAAGACATTAGCTTTGTATTCCCGTCTTATAATTCTCCTGA
AAAAGCCAAAGCATTTAATACCGACCTTAATTGGGAATTAAAAGATCAAAACGATAAAAATATACCGTTCGCACAAGCAA
AATTAGTCTATGACGGTGTGCAAATTGGTCATAATATTCAATTTGAATTAGCGAAATTTAATACGACTGAGCATGTTGCC
GCTTTTAAACAAGATATGATCACCGTCACTCATAAAGAAATAAAAAATGAGAAAGGTGAAAATACAGCAGAGCAAATGTT
GAATTACTGGTATGAAAAAGCAGATAAAGAAACACAAGAAAGATTTAAAACATCGATCTCTAATTAG

Upstream 100 bases:

>100_bases
GTAGGGCTGACCTACAATTTTTAGCACGACCCTAAATATTCCATTCTTAACTAAAGATGAGTACACTTAGTCTAATTATT
TTAATTACTGGTGTACTCAC

Downstream 100 bases:

>100_bases
TAATAAATGCAATACTGAATACTGATGATAAATAAAAATGGCTTACACCAGTAAGCCATTTTTGCTAATTATTCGACGAA
CACTCAATCTCTATTTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKFHSFLAAGLCLLTSLSASASIQLTVPSEVELLLVDSQEVKLDSSFFSTTSTLKLDDGEHQIVFRYNPVFKQGKDNIIV
SSDIIVSKFTATNQDISFVFPSYNSPEKAKAFNTDLNWELKDQNDKNIPFAQAKLVYDGVQIGHNIQFELAKFNTTEHVA
AFKQDMITVTHKEIKNEKGENTAEQMLNYWYEKADKETQERFKTSISN

Sequences:

>Translated_208_residues
MKFHSFLAAGLCLLTSLSASASIQLTVPSEVELLLVDSQEVKLDSSFFSTTSTLKLDDGEHQIVFRYNPVFKQGKDNIIV
SSDIIVSKFTATNQDISFVFPSYNSPEKAKAFNTDLNWELKDQNDKNIPFAQAKLVYDGVQIGHNIQFELAKFNTTEHVA
AFKQDMITVTHKEIKNEKGENTAEQMLNYWYEKADKETQERFKTSISN
>Mature_208_residues
MKFHSFLAAGLCLLTSLSASASIQLTVPSEVELLLVDSQEVKLDSSFFSTTSTLKLDDGEHQIVFRYNPVFKQGKDNIIV
SSDIIVSKFTATNQDISFVFPSYNSPEKAKAFNTDLNWELKDQNDKNIPFAQAKLVYDGVQIGHNIQFELAKFNTTEHVA
AFKQDMITVTHKEIKNEKGENTAEQMLNYWYEKADKETQERFKTSISN

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family

Homologues:

Organism=Escherichia coli, GI1787198, Length=205, Percent_Identity=24.390243902439, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2129_ALISL (B6EI75)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002263499.1
- GeneID:   6987607
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I2129
- HOGENOM:   HBG625766
- OMA:   FEHEILQ
- ProtClustDB:   CLSK2396169
- HAMAP:   MF_00789
- InterPro:   IPR018635

Pfam domain/function: PF09829 DUF2057

EC number: NA

Molecular weight: Translated: 23590; Mature: 23590

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFHSFLAAGLCLLTSLSASASIQLTVPSEVELLLVDSQEVKLDSSFFSTTSTLKLDDGE
CCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCEEECCHHHCCCEEEEECCCC
HQIVFRYNPVFKQGKDNIIVSSDIIVSKFTATNQDISFVFPSYNSPEKAKAFNTDLNWEL
EEEEEEECCHHHCCCCCEEEECCEEEEEEECCCCCEEEEECCCCCCCHHHHCCCCCCEEE
KDQNDKNIPFAQAKLVYDGVQIGHNIQFELAKFNTTEHVAAFKQDMITVTHKEIKNEKGE
CCCCCCCCCHHHHEEEECCEECCCCEEEEEEECCCHHHHHHHHHHHHEEHHHHHCCCCCC
NTAEQMLNYWYEKADKETQERFKTSISN
CHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKFHSFLAAGLCLLTSLSASASIQLTVPSEVELLLVDSQEVKLDSSFFSTTSTLKLDDGE
CCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCEEECCHHHCCCEEEEECCCC
HQIVFRYNPVFKQGKDNIIVSSDIIVSKFTATNQDISFVFPSYNSPEKAKAFNTDLNWEL
EEEEEEECCHHHCCCCCEEEECCEEEEEEECCCCCEEEEECCCCCCCHHHHCCCCCCEEE
KDQNDKNIPFAQAKLVYDGVQIGHNIQFELAKFNTTEHVAAFKQDMITVTHKEIKNEKGE
CCCCCCCCCHHHHEEEECCEECCCCEEEEEEECCCHHHHHHHHHHHHEEHHHHHCCCCCC
NTAEQMLNYWYEKADKETQERFKTSISN
CHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA