| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is pstA [H]
Identifier: 209695563
GI number: 209695563
Start: 2271016
End: 2271870
Strand: Direct
Name: pstA [H]
Synonym: VSAL_I2120
Alternate gene names: 209695563
Gene position: 2271016-2271870 (Clockwise)
Preceding gene: 209695562
Following gene: 209695564
Centisome position: 68.3
GC content: 38.83
Gene sequence:
>855_bases ATGAATAAATTAAAAAAACAACGTCATATTAAAGACCAGATTGCCGCAGGATTAATTTGGTTATCTGCATCTATTACCGT CGGTTTTCTTTTTTGGATAATGTGGTACATCTTATCAAATGGCCTACAGCACGTAAGCTGGTCATTCATTACTGATAATT ACACTCGTACTGGTGAAGAACACGGTATCTTCCCAATGATCGTGGCCACCCTCTACATGGTATTAGCTTCAATTGCAGTT GCAGCACCACTTGGGATAATGACGGCCATCTATTTAACCGAATACGCAAAAGTAGGCAGTAAACTCGTTAAAGTCATTCG CTTCTGTACCGAGTCATTAGCGGGTATTCCATCGATAATCTTTGGTCTATTTGGTATGACTTTCTTTGTGGGTATTTTAG GCTTAGGTTTCTCAATTTTATCCGGCGCACTTACGCTGAGTATTTTAATCTTACCCGTGATTATCCGTACAACAGAAGAA GCATTAATGGCTGTACCTCAAACCTTTAGAGAAGGCTCTTATGGTTTAGGAGCATCAAAAATCTATACCATTTGGCGCTT AATATTACCAAGCGCAATGCCAGGTATTTTAACCTCTGTTATTTTAAGTATTGGTCGTGTTATTGGTGAATCCGCACCTG TATTCTTAACCGCTGGTATGGTGGCACGTATTCCTGATTCATTGCTTGATTCAGGCAGAACATTAACCGTTCACCTGTAC AAATTAACCACTGAATTATTTACCATCGAAGAATGGAATCAAGCTTACGCAACAGCGACAGTATTGATTGTTCTTGTATT AATAATTAACACGCTAACGAAGCTATTGGCTCGAAAAATCAATAAAGCGTCTTAA
Upstream 100 bases:
>100_bases GCCAGTGCTCTATATGCAACAGGCGTAGTATTACTCGTCTTTATCATGTCTCTGAATGGCATTCTTCTTTATCTAAATCG TGAAACAGCGAGATAAGACA
Downstream 100 bases:
>100_bases TTAATCGATTTATTATCTATCACTAATTATTGACTGATTGCACGGCATAAGATGCGATCAGTAAGGAAAACACAATGAAC AAATTTAATATTGAAAACCT
Product: phosphate ABC transporter permease protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MNKLKKQRHIKDQIAAGLIWLSASITVGFLFWIMWYILSNGLQHVSWSFITDNYTRTGEEHGIFPMIVATLYMVLASIAV AAPLGIMTAIYLTEYAKVGSKLVKVIRFCTESLAGIPSIIFGLFGMTFFVGILGLGFSILSGALTLSILILPVIIRTTEE ALMAVPQTFREGSYGLGASKIYTIWRLILPSAMPGILTSVILSIGRVIGESAPVFLTAGMVARIPDSLLDSGRTLTVHLY KLTTELFTIEEWNQAYATATVLIVLVLIINTLTKLLARKINKAS
Sequences:
>Translated_284_residues MNKLKKQRHIKDQIAAGLIWLSASITVGFLFWIMWYILSNGLQHVSWSFITDNYTRTGEEHGIFPMIVATLYMVLASIAV AAPLGIMTAIYLTEYAKVGSKLVKVIRFCTESLAGIPSIIFGLFGMTFFVGILGLGFSILSGALTLSILILPVIIRTTEE ALMAVPQTFREGSYGLGASKIYTIWRLILPSAMPGILTSVILSIGRVIGESAPVFLTAGMVARIPDSLLDSGRTLTVHLY KLTTELFTIEEWNQAYATATVLIVLVLIINTLTKLLARKINKAS >Mature_284_residues MNKLKKQRHIKDQIAAGLIWLSASITVGFLFWIMWYILSNGLQHVSWSFITDNYTRTGEEHGIFPMIVATLYMVLASIAV AAPLGIMTAIYLTEYAKVGSKLVKVIRFCTESLAGIPSIIFGLFGMTFFVGILGLGFSILSGALTLSILILPVIIRTTEE ALMAVPQTFREGSYGLGASKIYTIWRLILPSAMPGILTSVILSIGRVIGESAPVFLTAGMVARIPDSLLDSGRTLTVHLY KLTTELFTIEEWNQAYATATVLIVLVLIINTLTKLLARKINKAS
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=287, Percent_Identity=32.7526132404181, Blast_Score=127, Evalue=6e-31, Organism=Escherichia coli, GI1790164, Length=268, Percent_Identity=24.2537313432836, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31105; Mature: 31105
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLKKQRHIKDQIAAGLIWLSASITVGFLFWIMWYILSNGLQHVSWSFITDNYTRTGEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC HGIFPMIVATLYMVLASIAVAAPLGIMTAIYLTEYAKVGSKLVKVIRFCTESLAGIPSII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLFGMTFFVGILGLGFSILSGALTLSILILPVIIRTTEEALMAVPQTFREGSYGLGASK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IYTIWRLILPSAMPGILTSVILSIGRVIGESAPVFLTAGMVARIPDSLLDSGRTLTVHLY HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCEEEEHHH KLTTELFTIEEWNQAYATATVLIVLVLIINTLTKLLARKINKAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKLKKQRHIKDQIAAGLIWLSASITVGFLFWIMWYILSNGLQHVSWSFITDNYTRTGEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC HGIFPMIVATLYMVLASIAVAAPLGIMTAIYLTEYAKVGSKLVKVIRFCTESLAGIPSII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLFGMTFFVGILGLGFSILSGALTLSILILPVIIRTTEEALMAVPQTFREGSYGLGASK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IYTIWRLILPSAMPGILTSVILSIGRVIGESAPVFLTAGMVARIPDSLLDSGRTLTVHLY HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCEEEEHHH KLTTELFTIEEWNQAYATATVLIVLVLIINTLTKLLARKINKAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]