| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is 209695551
Identifier: 209695551
GI number: 209695551
Start: 2255434
End: 2256573
Strand: Direct
Name: 209695551
Synonym: VSAL_I2107
Alternate gene names: NA
Gene position: 2255434-2256573 (Clockwise)
Preceding gene: 209695550
Following gene: 209695552
Centisome position: 67.83
GC content: 38.42
Gene sequence:
>1140_bases TTGCTTTTGAACAAGGTTTACACCGATACAGCTGATATGATCCATTTACTTTCTAATAATATGGCCAATTTTGTGACCCA ATATACTAATGACCCTTTTAATGCCTTAGAAGCAAAAACTGAAGCTCAAAAACTCTCTTTTGCTCCTATCGTTTTTCATA CAGCTCGTACATTGAGAGATTTAGGTATTCTTGCCGCATTAGACAAGGCAGGAAACCTAGGATTAAACGCACAACAATTG TCAGAAAGCACTGATATCTCTGAGTATGGTGTCAAAGTACTATTGGATATGGCGTTAAGTGCTCATATTGTCACGTGGAA TGAACCTAATTATATTCAAGCCAATTTAGGTCACTTTTTATTGCATGATGGCATGACAAACGCCAATTTAGATTTCACGG CAGATGTATGCTATGCCGCGATGATGCATTTAACCGAATCAATAAAAGAAGGAACGCCAGCAGGCTTAAAAGAGCTTGGT GATTGGCCTACAATCTATGAAGGATTGTCTCGTTTACCTGAGAAAGCAAAAGAAAGCTGGTTTAAGTTTGATCACTTCTA TTCTGATCGTTCATTCCCAATATTATTAGAAAAAGTATTGAGCCAAAAGCCTCAACGTTTGTTTGATATTGGCGGCAATA CAGGGAAATGGGCTTTAGAGTGTTGTAAATACGATTCTGACGTTAACGTTACGATTATCGATTTACCACAGCAAATTGAA ATGGCGTTAAAAAACGCAGAACAGCAAGGCTTTGCCGACCGTATTAACGGCCATCCTACCAATATGTTAGATAAAACACT GCCATTGCCTCAAGGTGCTGATGTCTGGTGGATGAGCCAATTTCTAGATTGCTTCTCTCCAATGGAAATATTAAGCATTC TTAAGCGTGTTCGTGCGGCTATGTCCATCGATGCTAAAGTCTATATTCTTGAGCTGTTTTGGGATGCTCAAAAGTACGAT GCTGCGTCATACAGTTTAAATGCAACATCGCTATACTTTACTTGTTTAGCAAACGGAAACAGTCGTTTTTATCGTTGCGG TGATTTCTTAGAGATCATTAGCGAAGCTGGATTCATTGTTGCGGAACAAACGAATAATATTGGATTAGATCATACTCTAC TTGAACTTAAAGCTAAATAA
Upstream 100 bases:
>100_bases GGAAAAGCCGATTTAATACATTTAAAGTGCAATTTAAAGATAATGTCGTTTCAAAAATTATCGACTAATCTATTGATACC TAATTCATATCTGTCATTTC
Downstream 100 bases:
>100_bases CGCTTAAACCATAGCAACATCCCTATTAAAAAATAAAACAATGGCAGGTGGTAATACACCTGCATGAATGAGGAATTTCT GTGTCTACACCACAATCAAC
Product: O-methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase Type; O-Methyltransferase Family Protein; Methyltransferase; SAM-Dependent O-Methyltransferase
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MLLNKVYTDTADMIHLLSNNMANFVTQYTNDPFNALEAKTEAQKLSFAPIVFHTARTLRDLGILAALDKAGNLGLNAQQL SESTDISEYGVKVLLDMALSAHIVTWNEPNYIQANLGHFLLHDGMTNANLDFTADVCYAAMMHLTESIKEGTPAGLKELG DWPTIYEGLSRLPEKAKESWFKFDHFYSDRSFPILLEKVLSQKPQRLFDIGGNTGKWALECCKYDSDVNVTIIDLPQQIE MALKNAEQQGFADRINGHPTNMLDKTLPLPQGADVWWMSQFLDCFSPMEILSILKRVRAAMSIDAKVYILELFWDAQKYD AASYSLNATSLYFTCLANGNSRFYRCGDFLEIISEAGFIVAEQTNNIGLDHTLLELKAK
Sequences:
>Translated_379_residues MLLNKVYTDTADMIHLLSNNMANFVTQYTNDPFNALEAKTEAQKLSFAPIVFHTARTLRDLGILAALDKAGNLGLNAQQL SESTDISEYGVKVLLDMALSAHIVTWNEPNYIQANLGHFLLHDGMTNANLDFTADVCYAAMMHLTESIKEGTPAGLKELG DWPTIYEGLSRLPEKAKESWFKFDHFYSDRSFPILLEKVLSQKPQRLFDIGGNTGKWALECCKYDSDVNVTIIDLPQQIE MALKNAEQQGFADRINGHPTNMLDKTLPLPQGADVWWMSQFLDCFSPMEILSILKRVRAAMSIDAKVYILELFWDAQKYD AASYSLNATSLYFTCLANGNSRFYRCGDFLEIISEAGFIVAEQTNNIGLDHTLLELKAK >Mature_379_residues MLLNKVYTDTADMIHLLSNNMANFVTQYTNDPFNALEAKTEAQKLSFAPIVFHTARTLRDLGILAALDKAGNLGLNAQQL SESTDISEYGVKVLLDMALSAHIVTWNEPNYIQANLGHFLLHDGMTNANLDFTADVCYAAMMHLTESIKEGTPAGLKELG DWPTIYEGLSRLPEKAKESWFKFDHFYSDRSFPILLEKVLSQKPQRLFDIGGNTGKWALECCKYDSDVNVTIIDLPQQIE MALKNAEQQGFADRINGHPTNMLDKTLPLPQGADVWWMSQFLDCFSPMEILSILKRVRAAMSIDAKVYILELFWDAQKYD AASYSLNATSLYFTCLANGNSRFYRCGDFLEIISEAGFIVAEQTNNIGLDHTLLELKAK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42582; Mature: 42582
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLNKVYTDTADMIHLLSNNMANFVTQYTNDPFNALEAKTEAQKLSFAPIVFHTARTLRD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH LGILAALDKAGNLGLNAQQLSESTDISEYGVKVLLDMALSAHIVTWNEPNYIQANLGHFL HHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCCEE LHDGMTNANLDFTADVCYAAMMHLTESIKEGTPAGLKELGDWPTIYEGLSRLPEKAKESW EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH FKFDHFYSDRSFPILLEKVLSQKPQRLFDIGGNTGKWALECCKYDSDVNVTIIDLPQQIE HHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCCCCCEEEEECCHHHH MALKNAEQQGFADRINGHPTNMLDKTLPLPQGADVWWMSQFLDCFSPMEILSILKRVRAA HHHHCCHHCCCHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH MSIDAKVYILELFWDAQKYDAASYSLNATSLYFTCLANGNSRFYRCGDFLEIISEAGFIV HCCCCEEEEEEEECCHHHHCCCCEECCCCEEEEEEEECCCCCEEEHHHHHHHHHHCCEEE AEQTNNIGLDHTLLELKAK EECCCCCCCCHHHEEEECC >Mature Secondary Structure MLLNKVYTDTADMIHLLSNNMANFVTQYTNDPFNALEAKTEAQKLSFAPIVFHTARTLRD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH LGILAALDKAGNLGLNAQQLSESTDISEYGVKVLLDMALSAHIVTWNEPNYIQANLGHFL HHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCCEE LHDGMTNANLDFTADVCYAAMMHLTESIKEGTPAGLKELGDWPTIYEGLSRLPEKAKESW EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH FKFDHFYSDRSFPILLEKVLSQKPQRLFDIGGNTGKWALECCKYDSDVNVTIIDLPQQIE HHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCCCCCEEEEECCHHHH MALKNAEQQGFADRINGHPTNMLDKTLPLPQGADVWWMSQFLDCFSPMEILSILKRVRAA HHHHCCHHCCCHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH MSIDAKVYILELFWDAQKYDAASYSLNATSLYFTCLANGNSRFYRCGDFLEIISEAGFIV HCCCCEEEEEEEECCHHHHCCCCEECCCCEEEEEEEECCCCCEEEHHHHHHHHHHCCEEE AEQTNNIGLDHTLLELKAK EECCCCCCCCHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA