Click here to switch to the map view.

The map label for this gene is yejH [H]

Identifier: 209695528

GI number: 209695528

Start: 2233560

End: 2235284

Strand: Direct

Name: yejH [H]

Synonym: VSAL_I2082

Alternate gene names: 209695528

Gene position: 2233560-2235284 (Clockwise)

Preceding gene: 209695526

Following gene: 209695530

Centisome position: 67.17

GC content: 41.57

Gene sequence:

>1725_bases
ATGTATACGTTACGTCCTTATCAACAAGATTCAGTCAAAGCCGTTATTCATTATTTCCGAAAACACACCAGCCCTGCGGT
ATTAGTGTTGCCGACGGGTGCCGGTAAAAGTTTGGTGATTGCTGAGTTGGCACGCATTGCTAAAGGTCGTGTATTGGTCA
TGGCTCACGTAAAAGAATTGGTTGAGCAAAACCATGAAAAATACGAAGGGTACGGCGAAGAAGCCTCTATATTTTCAGCA
GGATTAGGGCGTAAAGAAACCGATAAAAAAGTGGTTTTTGCCTCGGTACAATCAGTGGTTCGTAATCTTAACTCGTTCAA
AGATCAGTTTTCTCTGCTCGTCATTGATGAATGCCACCGAGTGCCTGACAACAAAGACACCAGTTACCGTAAAGTTATCG
AACATCTGCAAACCCAAAATTCTGGCATTAAAGTGCTTGGCTTAACTGCCACCCCTTATCGTTTAGGCATTGGTTGGATT
TATCAATATCACACTCGTGGACAAGTCAAAACCGACACGCCTCGTTTTTTCCGTGATTGTATTTTTGAGTTACCAATTCA
ATATCTATTGGATGAGGGCTTTTTAACCCCTGCAAAATTATTGGATGCCCCAATTTTAAGCTACGACTTTTCTCAGTTAA
AACCCGCCTCAACGGGTCGTTATAAAGAATCAGAATTGGATCTGGTGATTGAAGAATCGAAACGCGCAACACCTCAAATT
GTTCAACAAATCATTGAATATGCCAAAGACAGAAAAGGCGTGATGATTTTTGCGGCAACAGTTCGTCATGCTCAAGAAAT
ATTATCATTACTGCCACCAGAGCAATCCGAATTGGTGATTGGCGATACCAAAGTGATTGAACGTGATGCCATTATCCAAC
GCTTCAAACAACAACAAACCAAGTTTTTGGTTAATGTGTCGGTATTAACAACCGGATTTGATGCGCCTCATGTCGATCTC
ATTGCTATTTTACGTCCAACCGAATCCGTCAGTTTGTACCAACAAATTGTCGGGCGAGGGTTACGTTTAGCTGAAGGGAA
AACAGAATGTACTATTTTGGATTACGCGGGGAATTGCTATGATCTCTACCAACCAGAGGTCGGTGATCCTAAACCTGACA
GTAACAGCGAAATAATCACGATTCCCTGCCCTGCTTGCGGTTTTAACAATAATTTCTGGGGTAAATTAGACAGTAATGGG
TTTTTACTGGAACATTTTGGTCGTCGTTGCCAAGGCTATTTTGAAGACGATGAAGGCACACGTGAAGAGTGTGGCTATCG
CTTTAGAGCTAAATACTGTAACGAGTGCGGTGCCGATAACGACATTGCTGCACGTATCTGCCATGAATGTGATGCTATTT
TAGTCGATCCAGATAAAAAACTAAAAGAAGCCCTTAAACTAAAAGAAGCCCGTATTCTCAACTGCATTGATTTAACACTG
ACCGCAGGAAAGAATCAGTTTGATAAGCCACAAATTAAAGTCACGTATTCTGGTGATGATGACTCTGAATTGCATGAAGT
GTGGCAACTGGGTACTAAGAAACAGAAGCAATTATTTTTAAACAATTTTGTCCGCCCTCATTTAGTCGACAGGCATCGCC
CATTTGAAGAAACAACAGCAATAAAAATAGCGAATAGCCAACACCGATTCCGTCCACCAAGCTTTGTTATCGCTCGTAAG
CAAGGCAAGTTTTGGTCTATTCGCGATAAGATTTTTGAAGAGTAA

Upstream 100 bases:

>100_bases
CTTTTAATCAACCCCCCTTTAATCTTAACAAGAAAACAAAGAGGAATATTTTTTATTCTGATATGATGACGCCTTGTCTT
TTACCACTGTGTTTATATCC

Downstream 100 bases:

>100_bases
TCTTACGGTATTATGCCATTACCACAACGAACGATAATTCATGTGGCATGAACGGCATTGAGCGTACGCTTTATCAAGCG
CGGCTCGTGCTGCCACTTCA

Product: helicase (DEAD/DEAH box helicase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MYTLRPYQQDSVKAVIHYFRKHTSPAVLVLPTGAGKSLVIAELARIAKGRVLVMAHVKELVEQNHEKYEGYGEEASIFSA
GLGRKETDKKVVFASVQSVVRNLNSFKDQFSLLVIDECHRVPDNKDTSYRKVIEHLQTQNSGIKVLGLTATPYRLGIGWI
YQYHTRGQVKTDTPRFFRDCIFELPIQYLLDEGFLTPAKLLDAPILSYDFSQLKPASTGRYKESELDLVIEESKRATPQI
VQQIIEYAKDRKGVMIFAATVRHAQEILSLLPPEQSELVIGDTKVIERDAIIQRFKQQQTKFLVNVSVLTTGFDAPHVDL
IAILRPTESVSLYQQIVGRGLRLAEGKTECTILDYAGNCYDLYQPEVGDPKPDSNSEIITIPCPACGFNNNFWGKLDSNG
FLLEHFGRRCQGYFEDDEGTREECGYRFRAKYCNECGADNDIAARICHECDAILVDPDKKLKEALKLKEARILNCIDLTL
TAGKNQFDKPQIKVTYSGDDDSELHEVWQLGTKKQKQLFLNNFVRPHLVDRHRPFEETTAIKIANSQHRFRPPSFVIARK
QGKFWSIRDKIFEE

Sequences:

>Translated_574_residues
MYTLRPYQQDSVKAVIHYFRKHTSPAVLVLPTGAGKSLVIAELARIAKGRVLVMAHVKELVEQNHEKYEGYGEEASIFSA
GLGRKETDKKVVFASVQSVVRNLNSFKDQFSLLVIDECHRVPDNKDTSYRKVIEHLQTQNSGIKVLGLTATPYRLGIGWI
YQYHTRGQVKTDTPRFFRDCIFELPIQYLLDEGFLTPAKLLDAPILSYDFSQLKPASTGRYKESELDLVIEESKRATPQI
VQQIIEYAKDRKGVMIFAATVRHAQEILSLLPPEQSELVIGDTKVIERDAIIQRFKQQQTKFLVNVSVLTTGFDAPHVDL
IAILRPTESVSLYQQIVGRGLRLAEGKTECTILDYAGNCYDLYQPEVGDPKPDSNSEIITIPCPACGFNNNFWGKLDSNG
FLLEHFGRRCQGYFEDDEGTREECGYRFRAKYCNECGADNDIAARICHECDAILVDPDKKLKEALKLKEARILNCIDLTL
TAGKNQFDKPQIKVTYSGDDDSELHEVWQLGTKKQKQLFLNNFVRPHLVDRHRPFEETTAIKIANSQHRFRPPSFVIARK
QGKFWSIRDKIFEE
>Mature_574_residues
MYTLRPYQQDSVKAVIHYFRKHTSPAVLVLPTGAGKSLVIAELARIAKGRVLVMAHVKELVEQNHEKYEGYGEEASIFSA
GLGRKETDKKVVFASVQSVVRNLNSFKDQFSLLVIDECHRVPDNKDTSYRKVIEHLQTQNSGIKVLGLTATPYRLGIGWI
YQYHTRGQVKTDTPRFFRDCIFELPIQYLLDEGFLTPAKLLDAPILSYDFSQLKPASTGRYKESELDLVIEESKRATPQI
VQQIIEYAKDRKGVMIFAATVRHAQEILSLLPPEQSELVIGDTKVIERDAIIQRFKQQQTKFLVNVSVLTTGFDAPHVDL
IAILRPTESVSLYQQIVGRGLRLAEGKTECTILDYAGNCYDLYQPEVGDPKPDSNSEIITIPCPACGFNNNFWGKLDSNG
FLLEHFGRRCQGYFEDDEGTREECGYRFRAKYCNECGADNDIAARICHECDAILVDPDKKLKEALKLKEARILNCIDLTL
TAGKNQFDKPQIKVTYSGDDDSELHEVWQLGTKKQKQLFLNNFVRPHLVDRHRPFEETTAIKIANSQHRFRPPSFVIARK
QGKFWSIRDKIFEE

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788511, Length=573, Percent_Identity=56.5445026178011, Blast_Score=699, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320539, Length=378, Percent_Identity=28.5714285714286, Blast_Score=139, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 65402; Mature: 65402

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTLRPYQQDSVKAVIHYFRKHTSPAVLVLPTGAGKSLVIAELARIAKGRVLVMAHVKEL
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHH
VEQNHEKYEGYGEEASIFSAGLGRKETDKKVVFASVQSVVRNLNSFKDQFSLLVIDECHR
HHCCHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHC
VPDNKDTSYRKVIEHLQTQNSGIKVLGLTATPYRLGIGWIYQYHTRGQVKTDTPRFFRDC
CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEECEEEEEEEECCCCCCCCCHHHHHHH
IFELPIQYLLDEGFLTPAKLLDAPILSYDFSQLKPASTGRYKESELDLVIEESKRATPQI
HHHCCHHHHHHCCCCCHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCEEEECCCCCCHHH
VQQIIEYAKDRKGVMIFAATVRHAQEILSLLPPEQSELVIGDTKVIERDAIIQRFKQQQT
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAEGKTECTILDYAGNCY
HEEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCEEECCCCCEEEEEECCCCEE
DLYQPEVGDPKPDSNSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFEDDEGT
ECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEHHHHHHHHCCCCCCCCCC
REECGYRFRAKYCNECGADNDIAARICHECDAILVDPDKKLKEALKLKEARILNCIDLTL
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHEEEEEEEE
TAGKNQFDKPQIKVTYSGDDDSELHEVWQLGTKKQKQLFLNNFVRPHLVDRHRPFEETTA
ECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCE
IKIANSQHRFRPPSFVIARKQGKFWSIRDKIFEE
EEEECCCCCCCCCCEEEEECCCCEEEHHHHHCCC
>Mature Secondary Structure
MYTLRPYQQDSVKAVIHYFRKHTSPAVLVLPTGAGKSLVIAELARIAKGRVLVMAHVKEL
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHH
VEQNHEKYEGYGEEASIFSAGLGRKETDKKVVFASVQSVVRNLNSFKDQFSLLVIDECHR
HHCCHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHC
VPDNKDTSYRKVIEHLQTQNSGIKVLGLTATPYRLGIGWIYQYHTRGQVKTDTPRFFRDC
CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEECEEEEEEEECCCCCCCCCHHHHHHH
IFELPIQYLLDEGFLTPAKLLDAPILSYDFSQLKPASTGRYKESELDLVIEESKRATPQI
HHHCCHHHHHHCCCCCHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCEEEECCCCCCHHH
VQQIIEYAKDRKGVMIFAATVRHAQEILSLLPPEQSELVIGDTKVIERDAIIQRFKQQQT
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAEGKTECTILDYAGNCY
HEEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCEEECCCCCEEEEEECCCCEE
DLYQPEVGDPKPDSNSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFEDDEGT
ECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEHHHHHHHHCCCCCCCCCC
REECGYRFRAKYCNECGADNDIAARICHECDAILVDPDKKLKEALKLKEARILNCIDLTL
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHEEEEEEEE
TAGKNQFDKPQIKVTYSGDDDSELHEVWQLGTKKQKQLFLNNFVRPHLVDRHRPFEETTA
ECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCE
IKIANSQHRFRPPSFVIARKQGKFWSIRDKIFEE
EEEECCCCCCCCCCEEEEECCCCEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]