The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695510

Identifier: 209695510

GI number: 209695510

Start: 2212400

End: 2213992

Strand: Direct

Name: 209695510

Synonym: VSAL_I2063

Alternate gene names: NA

Gene position: 2212400-2213992 (Clockwise)

Preceding gene: 209695509

Following gene: 209695511

Centisome position: 66.54

GC content: 34.34

Gene sequence:

>1593_bases
ATGAGCACCGCTGAATTAATTAAACGCATTCCGCACATGAATGTTCTTGTTTTCACTGAAAAACGAGAACGTAGTACCCA
GATCCGCCAATTTTTTCAAAAGGCGGGCTTTAAGAGTGCAGATAACTTTAATGTAAGCATGAAGGCGTCTGATTTGCCCG
TGTATGAATATTACTTCATTGAATATCGTTATTCTGAACATGAAGTAATATCGGACATCGTTAAGAGTGCACGAGCGAAA
GCTAAATTTGGTAAGCGACCAATCTTTATTATTGATATTGAAAATGAAGAGTCTCAAGTCGATGAAATCAATGCGAGAGA
ACTCTTCCCTGATTTTGTTGTAAATAGTCCAATTAATTTTGGTTATATTGATGAGTTAATTCGGAAATCATTCAATTTAA
CCTTATTAATTGAGAAATTGATTGCTGAAGTCAATAACTCCCAAGCGGCTTTTATTAAGCGAGCTCAAACTTATACTGGC
ACGTATAAGAACCGTATGCTTTTAAACATGACATTAGAAGAGTTAAATAAAGCGAAAGATTCTGTCACATTTAAAAAAGT
ATACCAGCGCCATGATAAAAGCGAGATCATGCCTCAGAACTTAATGGCTTATTGTGAAATGGTTGAGAAACCAAAAGCGA
TTCCTGTTCTTGAATTATTATTACGCTCAAAGCGTTATCAGTTCCAAGCAAATTTTATGCTTTCTGCTATTTATGCAGAA
GCAAAGCATACGAGTAAGGTTCAGATTGCACTTACAAAAGCGTATGAAAATAATCCTAAAAATGACGATGTATTTTATGC
GTTTCTTGATTTTATCATCGAGAACAATGAATCATTATTATTGCATAATATGGTAATGAAACGTTTTTATCATATAGGGA
TTACTCCTTCGACATTAAACAGAATGGTAATAGATCTTGCTAATGCTGTTTATAAAACGAACGTCGTTTTTAATAAAGAT
GATTATAAACGCTTCTTTGGTCAATTAATTATGACATTAAAGAAACGTATCTCTATGGATAAACGCGATGAACTGCAAGG
ATTCATTAATGTACTTGTTGCTCGTCAGTTGTATAAGCAAGGTAAGCGTTATAAAGCAAAAGCGATTGCGGTATTAAATT
ATCATCGTTTTCTTTCTAATCGAAAAGTTGCTTCTGATGAATTTCGTGTTGCCACTTTTGGTGTGCTAGCAATGGCGGGC
GAAATAAAGCTGTGTGTCACACTGTATAAAATGTTTGATCAAACTGGACTTAAAAAAACGGCCCCTCAGTTATTACAGCA
ATCGATGGCCCATTTTCAAAAGTTGAATAAAGTATACCAATGGCTAAGAGCTCAAAAGTCTGCGGATGAAAACAATCTAC
AATTGGTAAAAATCGGTCAAACGTACCCTTATTCTTCGGATCTTAATTACATGCTATTAACGCTAACATTAAGAGGGAAA
AATTTGATGAAAGATCCTAAAAACATTAAACAATGTTTGGCGATTATTCATCGAATGGAAAAGACCAATAACACCGCAGG
TTACGAGAATGTAATGTCATCAGTTGAGCAAAATAAAAAAATTCTTATTGATGTATTGTTAGGTAGCTCATAA

Upstream 100 bases:

>100_bases
TTTTATAAAACGAATGATAAAGCGGTGGTATTACTACCACTTTGTTGTTTACGGGTTGTTATATTGTAATCAATGTTTTT
AATTAGAGTTAATAATATAG

Downstream 100 bases:

>100_bases
TTTTATCTGTTTTTTTTCTTAATAGGTTTCATCCATCACAGAGATAGGAAAGAGTGATTTAGCTTTTTTCTAAAAATAGT
CCACACTTAAGTTATCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 530; Mature: 529

Protein sequence:

>530_residues
MSTAELIKRIPHMNVLVFTEKRERSTQIRQFFQKAGFKSADNFNVSMKASDLPVYEYYFIEYRYSEHEVISDIVKSARAK
AKFGKRPIFIIDIENEESQVDEINARELFPDFVVNSPINFGYIDELIRKSFNLTLLIEKLIAEVNNSQAAFIKRAQTYTG
TYKNRMLLNMTLEELNKAKDSVTFKKVYQRHDKSEIMPQNLMAYCEMVEKPKAIPVLELLLRSKRYQFQANFMLSAIYAE
AKHTSKVQIALTKAYENNPKNDDVFYAFLDFIIENNESLLLHNMVMKRFYHIGITPSTLNRMVIDLANAVYKTNVVFNKD
DYKRFFGQLIMTLKKRISMDKRDELQGFINVLVARQLYKQGKRYKAKAIAVLNYHRFLSNRKVASDEFRVATFGVLAMAG
EIKLCVTLYKMFDQTGLKKTAPQLLQQSMAHFQKLNKVYQWLRAQKSADENNLQLVKIGQTYPYSSDLNYMLLTLTLRGK
NLMKDPKNIKQCLAIIHRMEKTNNTAGYENVMSSVEQNKKILIDVLLGSS

Sequences:

>Translated_530_residues
MSTAELIKRIPHMNVLVFTEKRERSTQIRQFFQKAGFKSADNFNVSMKASDLPVYEYYFIEYRYSEHEVISDIVKSARAK
AKFGKRPIFIIDIENEESQVDEINARELFPDFVVNSPINFGYIDELIRKSFNLTLLIEKLIAEVNNSQAAFIKRAQTYTG
TYKNRMLLNMTLEELNKAKDSVTFKKVYQRHDKSEIMPQNLMAYCEMVEKPKAIPVLELLLRSKRYQFQANFMLSAIYAE
AKHTSKVQIALTKAYENNPKNDDVFYAFLDFIIENNESLLLHNMVMKRFYHIGITPSTLNRMVIDLANAVYKTNVVFNKD
DYKRFFGQLIMTLKKRISMDKRDELQGFINVLVARQLYKQGKRYKAKAIAVLNYHRFLSNRKVASDEFRVATFGVLAMAG
EIKLCVTLYKMFDQTGLKKTAPQLLQQSMAHFQKLNKVYQWLRAQKSADENNLQLVKIGQTYPYSSDLNYMLLTLTLRGK
NLMKDPKNIKQCLAIIHRMEKTNNTAGYENVMSSVEQNKKILIDVLLGSS
>Mature_529_residues
STAELIKRIPHMNVLVFTEKRERSTQIRQFFQKAGFKSADNFNVSMKASDLPVYEYYFIEYRYSEHEVISDIVKSARAKA
KFGKRPIFIIDIENEESQVDEINARELFPDFVVNSPINFGYIDELIRKSFNLTLLIEKLIAEVNNSQAAFIKRAQTYTGT
YKNRMLLNMTLEELNKAKDSVTFKKVYQRHDKSEIMPQNLMAYCEMVEKPKAIPVLELLLRSKRYQFQANFMLSAIYAEA
KHTSKVQIALTKAYENNPKNDDVFYAFLDFIIENNESLLLHNMVMKRFYHIGITPSTLNRMVIDLANAVYKTNVVFNKDD
YKRFFGQLIMTLKKRISMDKRDELQGFINVLVARQLYKQGKRYKAKAIAVLNYHRFLSNRKVASDEFRVATFGVLAMAGE
IKLCVTLYKMFDQTGLKKTAPQLLQQSMAHFQKLNKVYQWLRAQKSADENNLQLVKIGQTYPYSSDLNYMLLTLTLRGKN
LMKDPKNIKQCLAIIHRMEKTNNTAGYENVMSSVEQNKKILIDVLLGSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61657; Mature: 61525

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAELIKRIPHMNVLVFTEKRERSTQIRQFFQKAGFKSADNFNVSMKASDLPVYEYYFI
CCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEE
EYRYSEHEVISDIVKSARAKAKFGKRPIFIIDIENEESQVDEINARELFPDFVVNSPINF
EEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCHHHHCCHHHHCCCCCC
GYIDELIRKSFNLTLLIEKLIAEVNNSQAAFIKRAQTYTGTYKNRMLLNMTLEELNKAKD
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCEEEEEEHHHHHHHHH
SVTFKKVYQRHDKSEIMPQNLMAYCEMVEKPKAIPVLELLLRSKRYQFQANFMLSAIYAE
HHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AKHTSKVQIALTKAYENNPKNDDVFYAFLDFIIENNESLLLHNMVMKRFYHIGITPSTLN
HCCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHH
RMVIDLANAVYKTNVVFNKDDYKRFFGQLIMTLKKRISMDKRDELQGFINVLVARQLYKQ
HHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
GKRYKAKAIAVLNYHRFLSNRKVASDEFRVATFGVLAMAGEIKLCVTLYKMFDQTGLKKT
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
APQLLQQSMAHFQKLNKVYQWLRAQKSADENNLQLVKIGQTYPYSSDLNYMLLTLTLRGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCC
NLMKDPKNIKQCLAIIHRMEKTNNTAGYENVMSSVEQNKKILIDVLLGSS
HHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEECCC
>Mature Secondary Structure 
STAELIKRIPHMNVLVFTEKRERSTQIRQFFQKAGFKSADNFNVSMKASDLPVYEYYFI
CHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEE
EYRYSEHEVISDIVKSARAKAKFGKRPIFIIDIENEESQVDEINARELFPDFVVNSPINF
EEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCHHHHCCHHHHCCCCCC
GYIDELIRKSFNLTLLIEKLIAEVNNSQAAFIKRAQTYTGTYKNRMLLNMTLEELNKAKD
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCEEEEEEHHHHHHHHH
SVTFKKVYQRHDKSEIMPQNLMAYCEMVEKPKAIPVLELLLRSKRYQFQANFMLSAIYAE
HHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AKHTSKVQIALTKAYENNPKNDDVFYAFLDFIIENNESLLLHNMVMKRFYHIGITPSTLN
HCCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHH
RMVIDLANAVYKTNVVFNKDDYKRFFGQLIMTLKKRISMDKRDELQGFINVLVARQLYKQ
HHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
GKRYKAKAIAVLNYHRFLSNRKVASDEFRVATFGVLAMAGEIKLCVTLYKMFDQTGLKKT
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
APQLLQQSMAHFQKLNKVYQWLRAQKSADENNLQLVKIGQTYPYSSDLNYMLLTLTLRGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCC
NLMKDPKNIKQCLAIIHRMEKTNNTAGYENVMSSVEQNKKILIDVLLGSS
HHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA