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The map label for this gene is ybaF [H]

Identifier: 209695449

GI number: 209695449

Start: 2133072

End: 2133911

Strand: Direct

Name: ybaF [H]

Synonym: VSAL_I1990

Alternate gene names: 209695449

Gene position: 2133072-2133911 (Clockwise)

Preceding gene: 209695448

Following gene: 209695451

Centisome position: 64.15

GC content: 36.31

Gene sequence:

>840_bases
ATGTCCACTAAAAAACAAAGTTTCGGTATTAATTTCGTGGATTTAGATACATGGCTGCACCGTTTAAACGGGGTGACTAA
ATTCTTATTGTTTATTGCTTGGATTACGGTGGTATTAACTACGTTTGATCTCCGTATTATTATCCCACTGATTTTGTTTG
GTTTATGGTTATTAAAAGAAACAAAGGTGCCTTTAACTACGTATAAACCGTTACTAATAGGAACGGCATCTGTACTTAGT
ATGAATGCTATTTTTATGTTTCTATTGGCTCCAAATCAGGGTAATGAATTATTGGGTTCTACAACCGTATTATTTCCTAT
TTTTGGGAGCTATGTGGTAACACAAGAAACGTTATTTTATCTTATTACGGTGACACTGAAATATTTTAGTATGTTCCCAA
TTGCGTTGGTATTTGTATTTACAACGCATCCAACGGAGTTTGCTGCAAGTTTAAATCGACTTGGATTACCGTATAAAATT
GCTTATGCCGTGAGTTTAACATTGCGTTATTTACCTGAAGTAAAAAGTGATTTTGTTAATATAATGCACGCCCAGCAAGC
TCGTGGTGTCGATCTATCTAAAAATGTTCCGGTGTTTACTCGCATTAGTAATATCGCAAAAATATTAGGGCCATTGATTT
TCTCAAGTTTAGATCGTGCGGATGAAATATCAAACGCAATGGTGTTACGCGGATTTGGTCGAGGAAAAAGTCGAACGTGG
TTTAGTGAAAAAGCGATGACGAACATCGATGTATGGGTCATTAGCGGTTTACTATTCATTGTCGTGATGGCGATTACTAA
AAGAGTGATGGAAACGTCGTTATTCTGGTATCCATTCTAG

Upstream 100 bases:

>100_bases
ACGGTGACCAGTTTGTATGAGCTGGTTAATAAAGCAGGCATAAAGAATATAACGGGCTTTATGAATCAGTTTATTAGCAC
TGAGCGTGAGAGCGATAAGA

Downstream 100 bases:

>100_bases
TCACTATGTAGCGTAGATAATAAAAAAGTAGGCTCAGTACCTACTTTTTTATTATTGAATTTGGCCGATGATAATTATTT
TATTTCTTGGCTAAAGGCTT

Product: cobalt transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSTKKQSFGINFVDLDTWLHRLNGVTKFLLFIAWITVVLTTFDLRIIIPLILFGLWLLKETKVPLTTYKPLLIGTASVLS
MNAIFMFLLAPNQGNELLGSTTVLFPIFGSYVVTQETLFYLITVTLKYFSMFPIALVFVFTTHPTEFAASLNRLGLPYKI
AYAVSLTLRYLPEVKSDFVNIMHAQQARGVDLSKNVPVFTRISNIAKILGPLIFSSLDRADEISNAMVLRGFGRGKSRTW
FSEKAMTNIDVWVISGLLFIVVMAITKRVMETSLFWYPF

Sequences:

>Translated_279_residues
MSTKKQSFGINFVDLDTWLHRLNGVTKFLLFIAWITVVLTTFDLRIIIPLILFGLWLLKETKVPLTTYKPLLIGTASVLS
MNAIFMFLLAPNQGNELLGSTTVLFPIFGSYVVTQETLFYLITVTLKYFSMFPIALVFVFTTHPTEFAASLNRLGLPYKI
AYAVSLTLRYLPEVKSDFVNIMHAQQARGVDLSKNVPVFTRISNIAKILGPLIFSSLDRADEISNAMVLRGFGRGKSRTW
FSEKAMTNIDVWVISGLLFIVVMAITKRVMETSLFWYPF
>Mature_278_residues
STKKQSFGINFVDLDTWLHRLNGVTKFLLFIAWITVVLTTFDLRIIIPLILFGLWLLKETKVPLTTYKPLLIGTASVLSM
NAIFMFLLAPNQGNELLGSTTVLFPIFGSYVVTQETLFYLITVTLKYFSMFPIALVFVFTTHPTEFAASLNRLGLPYKIA
YAVSLTLRYLPEVKSDFVNIMHAQQARGVDLSKNVPVFTRISNIAKILGPLIFSSLDRADEISNAMVLRGFGRGKSRTWF
SEKAMTNIDVWVISGLLFIVVMAITKRVMETSLFWYPF

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 31606; Mature: 31475

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKKQSFGINFVDLDTWLHRLNGVTKFLLFIAWITVVLTTFDLRIIIPLILFGLWLLKE
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TKVPLTTYKPLLIGTASVLSMNAIFMFLLAPNQGNELLGSTTVLFPIFGSYVVTQETLFY
CCCCCHHCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHCCHHHHHHHHCCHHHHHHHHHH
LITVTLKYFSMFPIALVFVFTTHPTEFAASLNRLGLPYKIAYAVSLTLRYLPEVKSDFVN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH
IMHAQQARGVDLSKNVPVFTRISNIAKILGPLIFSSLDRADEISNAMVLRGFGRGKSRTW
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCC
FSEKAMTNIDVWVISGLLFIVVMAITKRVMETSLFWYPF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STKKQSFGINFVDLDTWLHRLNGVTKFLLFIAWITVVLTTFDLRIIIPLILFGLWLLKE
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TKVPLTTYKPLLIGTASVLSMNAIFMFLLAPNQGNELLGSTTVLFPIFGSYVVTQETLFY
CCCCCHHCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHCCHHHHHHHHCCHHHHHHHHHH
LITVTLKYFSMFPIALVFVFTTHPTEFAASLNRLGLPYKIAYAVSLTLRYLPEVKSDFVN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH
IMHAQQARGVDLSKNVPVFTRISNIAKILGPLIFSSLDRADEISNAMVLRGFGRGKSRTW
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCC
FSEKAMTNIDVWVISGLLFIVVMAITKRVMETSLFWYPF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]