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The map label for this gene is ygaW [H]

Identifier: 209695376

GI number: 209695376

Start: 2042634

End: 2043029

Strand: Direct

Name: ygaW [H]

Synonym: VSAL_I1909

Alternate gene names: 209695376

Gene position: 2042634-2043029 (Clockwise)

Preceding gene: 209695374

Following gene: 209695377

Centisome position: 61.43

GC content: 39.14

Gene sequence:

>396_bases
ATGGTGATTTTTTGTTTTATTACAGGCATGTTCATTGAAATTTTTATTTCAGGAATGACGTTTGAGCAATCTCTAGCGTC
ACGCATGCTGTCTATTCCAGTTAATATAGCGATTGCATGGCCTTACGGTGTTTTTCGAGACTTTATGCTACGCCAAGGAT
CTCGAGTATCATCGATGTCGTTTATAAAGAACGTTGCAGATTTAACGGCTTATGTATTATTTCAATCACCGGTTTACGCG
GCTATTTTATTTACGGTTGGGGCGAGTACCGATCAAATAATTACCGCAGTATCAAGTAATGCGGCTGTTTCATGTGTGAT
GGGTGTTTTTTATGGGTATTTTCTTGATGCATGCCGTAAAGCATTCAAAGTTCCTGGCTATACGCAAAGAGTGTAA

Upstream 100 bases:

>100_bases
GCTTTGAGTGGTATTATTAACTTTATTTTTTGGAGATAGAAAAAGAATGTCTAGAAAAGGACCATTTAGTATTCGCAATG
CTGCGGCTGATACATTTGCA

Downstream 100 bases:

>100_bases
AAATTAGTAACATAAAAGCAGTATGCATTGTTAATGCTTATGTATAAAATGTAAAGAATACATTGTATTAATGCATCTCC
CGTTTGAGACCTAATTTAGA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MVIFCFITGMFIEIFISGMTFEQSLASRMLSIPVNIAIAWPYGVFRDFMLRQGSRVSSMSFIKNVADLTAYVLFQSPVYA
AILFTVGASTDQIITAVSSNAAVSCVMGVFYGYFLDACRKAFKVPGYTQRV

Sequences:

>Translated_131_residues
MVIFCFITGMFIEIFISGMTFEQSLASRMLSIPVNIAIAWPYGVFRDFMLRQGSRVSSMSFIKNVADLTAYVLFQSPVYA
AILFTVGASTDQIITAVSSNAAVSCVMGVFYGYFLDACRKAFKVPGYTQRV
>Mature_131_residues
MVIFCFITGMFIEIFISGMTFEQSLASRMLSIPVNIAIAWPYGVFRDFMLRQGSRVSSMSFIKNVADLTAYVLFQSPVYA
AILFTVGASTDQIITAVSSNAAVSCVMGVFYGYFLDACRKAFKVPGYTQRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789025, Length=129, Percent_Identity=58.9147286821705, Blast_Score=163, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010574
- ProDom:   PD090021 [H]

Pfam domain/function: PF06610 DUF1144 [H]

EC number: NA

Molecular weight: Translated: 14494; Mature: 14494

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIFCFITGMFIEIFISGMTFEQSLASRMLSIPVNIAIAWPYGVFRDFMLRQGSRVSSMS
CEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCHHHHH
FIKNVADLTAYVLFQSPVYAAILFTVGASTDQIITAVSSNAAVSCVMGVFYGYFLDACRK
HHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AFKVPGYTQRV
HHCCCCCCCCC
>Mature Secondary Structure
MVIFCFITGMFIEIFISGMTFEQSLASRMLSIPVNIAIAWPYGVFRDFMLRQGSRVSSMS
CEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCHHHHH
FIKNVADLTAYVLFQSPVYAAILFTVGASTDQIITAVSSNAAVSCVMGVFYGYFLDACRK
HHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AFKVPGYTQRV
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]