The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695275

Identifier: 209695275

GI number: 209695275

Start: 1922402

End: 1923886

Strand: Direct

Name: 209695275

Synonym: VSAL_I1800

Alternate gene names: NA

Gene position: 1922402-1923886 (Clockwise)

Preceding gene: 209695274

Following gene: 209695276

Centisome position: 57.81

GC content: 42.56

Gene sequence:

>1485_bases
ATGAGCCATTATCAGAAACTCGTTCAACATCATTTGAAAATTTCTCGCTTTGAACACCTCTCCGCTATTTGTGGTTGGGA
TCAAGCCGCCGTTATGCCATCGGGCGGTAATGAAGCACGATCAGAAGCGATGGCAGAGCTGTCTGTTCACCTACATCAAC
TTGGTAATGCCCCACAATTAGCTGAATGGTTTACTAACGCAGAATCAGAATCTCTTTCTGAACATGAACTCGCTAGTCTG
CGTGAAATGAAATCTCAATGGCAACAAACCACAGCATTACCAGAGAAACTGGTTCAAGCACAATCCCTTGCAGGATCTAA
ATGTGAGCATGCATGGCGAACACAGCGTGGAGAAAATGACTGGGCAGGATTCAGTAAAAACTTTGCCAAAGTTGTCGCAC
TTTCTCAAGAAGAAGCACAAATTCGAGCCGAAATTTCAGGATTAACACCTTACGATGCCATGCTTGATTTGTATGAACCG
GGCACAACTACGGCAAAATTAGACATCGTCTTTGATAATGTAAAAACATGCCTTCCGACTCTTATTCAACAAATCCAAGA
GAAACAAGCAACTGAATCTATTTATCTTCCAAAAGGCCACTACCCTACAGAGCAACAACGCCAATTAAGTTTAGACGTAA
TGAAGTTGCTTAAATTCGATTTCGATCATGGCCGCTTAGATGTCAGCATGCACCCTTTTTGTGGTGGTGTTCCAACAGAC
GTTCGTATTACCACACGTTATGATGAAAATGATTTTGTTCAATCCTTAATGGGCACCGTTCATGAAACGGGTCACGCTCG
TTATGAACAAGGCTTACCAAAAACGTTTGCAGGGCTGCCTGTTGGCCAAGCTCGCTCTATGGGTATTCATGAGTCTCAGA
GCTTGTTCTTTGAAATGCAATTAGGTCGTAGCCAAGAGTTTATCTCTCAACTGTCTCCGTTAGTAACTAAGAACTTTAGC
AATGCTGACCAAGCCATCTTTGAACCGACTAACCTACAAGCCATTTACTCGCGCGTAAACCCTGATTTCATCCGTGTTGA
TGCTGATGAGGCAACTTATCCTGCTCACGTTATTCTTCGTTATGAAATTGAGCGAGATTTGATGAACGGTAAAATCAGTT
ATAAAGACATCCCTGAGTTGTGGGATACAAAGATGCAGCAGTACTTAGGCTTATCAACTAAAGACAATTACAAAAACGGT
TGTATGCAAGACATTCACTGGACAGACGGAAGTTTCGGATACTTCCCAAGCTACACTCTCGGCGCAATGTACGCAGCCCA
ATTTATGGCAGCAATGAAGCAAACCGTAGATGTAGAGAAAGCCACATTAAGCGGCGATTTAAACCCTATCTTCACTTGGC
TATCAGACAATATCTGGAGCAAAGCATCGCTACTCTCAACCGATGAATTAGTGAAACAAGCGACAGGTGATGTGCTGAAT
GCTAATTTCTTTAAAGATCATTTAGAGAAGCGTTATTTAGGGTAA

Upstream 100 bases:

>100_bases
GCAAGCCTCATCATAATGACGAGGCTTTTTTATTTGAAAAATAACCAACTAGGGAGTTACAATTTAACGATATTACTAAT
AATAAAAATAGGGACACCTC

Downstream 100 bases:

>100_bases
GAGCGAGAAGCTTATTTTTAATTTTGAGTAATTAAGAGAATGGATGCAGTTATTGGCTGCATCCATTTTTTGTATTTGAA
TCACCATTTTATCCCCGACA

Product: carboxypeptidase

Products: NA

Alternate protein names: Carboxypeptidase Taq [H]

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MSHYQKLVQHHLKISRFEHLSAICGWDQAAVMPSGGNEARSEAMAELSVHLHQLGNAPQLAEWFTNAESESLSEHELASL
REMKSQWQQTTALPEKLVQAQSLAGSKCEHAWRTQRGENDWAGFSKNFAKVVALSQEEAQIRAEISGLTPYDAMLDLYEP
GTTTAKLDIVFDNVKTCLPTLIQQIQEKQATESIYLPKGHYPTEQQRQLSLDVMKLLKFDFDHGRLDVSMHPFCGGVPTD
VRITTRYDENDFVQSLMGTVHETGHARYEQGLPKTFAGLPVGQARSMGIHESQSLFFEMQLGRSQEFISQLSPLVTKNFS
NADQAIFEPTNLQAIYSRVNPDFIRVDADEATYPAHVILRYEIERDLMNGKISYKDIPELWDTKMQQYLGLSTKDNYKNG
CMQDIHWTDGSFGYFPSYTLGAMYAAQFMAAMKQTVDVEKATLSGDLNPIFTWLSDNIWSKASLLSTDELVKQATGDVLN
ANFFKDHLEKRYLG

Sequences:

>Translated_494_residues
MSHYQKLVQHHLKISRFEHLSAICGWDQAAVMPSGGNEARSEAMAELSVHLHQLGNAPQLAEWFTNAESESLSEHELASL
REMKSQWQQTTALPEKLVQAQSLAGSKCEHAWRTQRGENDWAGFSKNFAKVVALSQEEAQIRAEISGLTPYDAMLDLYEP
GTTTAKLDIVFDNVKTCLPTLIQQIQEKQATESIYLPKGHYPTEQQRQLSLDVMKLLKFDFDHGRLDVSMHPFCGGVPTD
VRITTRYDENDFVQSLMGTVHETGHARYEQGLPKTFAGLPVGQARSMGIHESQSLFFEMQLGRSQEFISQLSPLVTKNFS
NADQAIFEPTNLQAIYSRVNPDFIRVDADEATYPAHVILRYEIERDLMNGKISYKDIPELWDTKMQQYLGLSTKDNYKNG
CMQDIHWTDGSFGYFPSYTLGAMYAAQFMAAMKQTVDVEKATLSGDLNPIFTWLSDNIWSKASLLSTDELVKQATGDVLN
ANFFKDHLEKRYLG
>Mature_493_residues
SHYQKLVQHHLKISRFEHLSAICGWDQAAVMPSGGNEARSEAMAELSVHLHQLGNAPQLAEWFTNAESESLSEHELASLR
EMKSQWQQTTALPEKLVQAQSLAGSKCEHAWRTQRGENDWAGFSKNFAKVVALSQEEAQIRAEISGLTPYDAMLDLYEPG
TTTAKLDIVFDNVKTCLPTLIQQIQEKQATESIYLPKGHYPTEQQRQLSLDVMKLLKFDFDHGRLDVSMHPFCGGVPTDV
RITTRYDENDFVQSLMGTVHETGHARYEQGLPKTFAGLPVGQARSMGIHESQSLFFEMQLGRSQEFISQLSPLVTKNFSN
ADQAIFEPTNLQAIYSRVNPDFIRVDADEATYPAHVILRYEIERDLMNGKISYKDIPELWDTKMQQYLGLSTKDNYKNGC
MQDIHWTDGSFGYFPSYTLGAMYAAQFMAAMKQTVDVEKATLSGDLNPIFTWLSDNIWSKASLLSTDELVKQATGDVLNA
NFFKDHLEKRYLG

Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]

COG id: COG2317

COG function: function code E; Zn-dependent carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001333 [H]

Pfam domain/function: PF02074 Peptidase_M32 [H]

EC number: =3.4.17.19 [H]

Molecular weight: Translated: 55862; Mature: 55730

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHYQKLVQHHLKISRFEHLSAICGWDQAAVMPSGGNEARSEAMAELSVHLHQLGNAPQL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCHH
AEWFTNAESESLSEHELASLREMKSQWQQTTALPEKLVQAQSLAGSKCEHAWRTQRGEND
HHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
WAGFSKNFAKVVALSQEEAQIRAEISGLTPYDAMLDLYEPGTTTAKLDIVFDNVKTCLPT
CCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHH
LIQQIQEKQATESIYLPKGHYPTEQQRQLSLDVMKLLKFDFDHGRLDVSMHPFCGGVPTD
HHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
VRITTRYDENDFVQSLMGTVHETGHARYEQGLPKTFAGLPVGQARSMGIHESQSLFFEMQ
EEEEEECCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCHHCCCCCCCHHEEEEEC
LGRSQEFISQLSPLVTKNFSNADQAIFEPTNLQAIYSRVNPDFIRVDADEATYPAHVILR
CCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEE
YEIERDLMNGKISYKDIPELWDTKMQQYLGLSTKDNYKNGCMQDIHWTDGSFGYFPSYTL
EEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
GAMYAAQFMAAMKQTVDVEKATLSGDLNPIFTWLSDNIWSKASLLSTDELVKQATGDVLN
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHH
ANFFKDHLEKRYLG
HHHHHHHHHHHCCC
>Mature Secondary Structure 
SHYQKLVQHHLKISRFEHLSAICGWDQAAVMPSGGNEARSEAMAELSVHLHQLGNAPQL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCHH
AEWFTNAESESLSEHELASLREMKSQWQQTTALPEKLVQAQSLAGSKCEHAWRTQRGEND
HHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
WAGFSKNFAKVVALSQEEAQIRAEISGLTPYDAMLDLYEPGTTTAKLDIVFDNVKTCLPT
CCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHH
LIQQIQEKQATESIYLPKGHYPTEQQRQLSLDVMKLLKFDFDHGRLDVSMHPFCGGVPTD
HHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
VRITTRYDENDFVQSLMGTVHETGHARYEQGLPKTFAGLPVGQARSMGIHESQSLFFEMQ
EEEEEECCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCHHCCCCCCCHHEEEEEC
LGRSQEFISQLSPLVTKNFSNADQAIFEPTNLQAIYSRVNPDFIRVDADEATYPAHVILR
CCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEE
YEIERDLMNGKISYKDIPELWDTKMQQYLGLSTKDNYKNGCMQDIHWTDGSFGYFPSYTL
EEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
GAMYAAQFMAAMKQTVDVEKATLSGDLNPIFTWLSDNIWSKASLLSTDELVKQATGDVLN
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHH
ANFFKDHLEKRYLG
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7765282; 1369078 [H]