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The map label for this gene is yfaE [H]

Identifier: 209695250

GI number: 209695250

Start: 1889511

End: 1889786

Strand: Direct

Name: yfaE [H]

Synonym: VSAL_I1772

Alternate gene names: 209695250

Gene position: 1889511-1889786 (Clockwise)

Preceding gene: 209695249

Following gene: 209695252

Centisome position: 56.82

GC content: 40.94

Gene sequence:

>276_bases
ATGAAAATATACATAAATAAAATAATAACGATCACCAACCAGCCCAATGTTTCTTTGCTAGAAATGATGGAACAACAAGG
CATGGTCGTCGAATCACACTGCCGTAACGGTGACTGTGGCACTTGCCGGTGCACGTTAGTGTCTGGAGAAGTCAGTTACT
CTACGTTCCCACTTGCTTTTTTAGCCCCTAATGAAATATTGCCTTGCGTTTGTACAGCAAAAACAGATCTTGTTATCGAC
GATCTTACGTTCCAAACTCTCGCAAAAAAAGCATAA

Upstream 100 bases:

>100_bases
GTCTCAATTTACCAAATTAAACGCTGAAACCTTAAGGCATTAATTCATTTTTAAACTATGTTATAGTCACTATTCTATTT
TTAGAACCCTTAATCAAACA

Downstream 100 bases:

>100_bases
AAAAACGACCCTTCTAGGATCGCATTATTCGGTTATCAAGCACATCAATACGTTAAACTATAATGCACTCTGTGGTACGT
AAATTTCTGATTCACGATTT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKIYINKIITITNQPNVSLLEMMEQQGMVVESHCRNGDCGTCRCTLVSGEVSYSTFPLAFLAPNEILPCVCTAKTDLVID
DLTFQTLAKKA

Sequences:

>Translated_91_residues
MKIYINKIITITNQPNVSLLEMMEQQGMVVESHCRNGDCGTCRCTLVSGEVSYSTFPLAFLAPNEILPCVCTAKTDLVID
DLTFQTLAKKA
>Mature_91_residues
MKIYINKIITITNQPNVSLLEMMEQQGMVVESHCRNGDCGTCRCTLVSGEVSYSTFPLAFLAPNEILPCVCTAKTDLVID
DLTFQTLAKKA

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788568, Length=80, Percent_Identity=42.5, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 10031; Mature: 10031

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
11.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYINKIITITNQPNVSLLEMMEQQGMVVESHCRNGDCGTCRCTLVSGEVSYSTFPLAF
CEEEEEEEEEEECCCCHHHHHHHHHCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCEEE
LAPNEILPCVCTAKTDLVIDDLTFQTLAKKA
ECCCCCCEEEECCCCCEEEECCCHHHHHCCC
>Mature Secondary Structure
MKIYINKIITITNQPNVSLLEMMEQQGMVVESHCRNGDCGTCRCTLVSGEVSYSTFPLAF
CEEEEEEEEEEECCCCHHHHHHHHHCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCEEE
LAPNEILPCVCTAKTDLVIDDLTFQTLAKKA
ECCCCCCEEEECCCCCEEEECCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]