Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is chbA [H]
Identifier: 209695157
GI number: 209695157
Start: 1758057
End: 1758377
Strand: Direct
Name: chbA [H]
Synonym: VSAL_I1660
Alternate gene names: 209695157
Gene position: 1758057-1758377 (Clockwise)
Preceding gene: 209695156
Following gene: 209695158
Centisome position: 52.87
GC content: 38.01
Gene sequence:
>321_bases ATGGATAGTGAAGAGTACGAAGAAAAAGTAATGATGCTGCTTGTTAATGCGGGATCTGCTCGTAGCCAATTAATGGAAGC AATGAGAGCCGCTCGTCAGAAGAATTTTGAACTTTCTGATAAGCATATTGAAGGTGCGCAAGCGGCATTAAAAGAAGCAC ACTCAATTCAAACTAGACTTATTGAATTTGATGAAGGAGAAGGAAAACTTCCCGTTCATATTGTGATGGTTCACGCTCAA GATCACCTTATGAACGCCGTTTTATTAATGGATATGGCCACAGAAATTATCTATTTGCATAAAGAACGAATGATTTCATA A
Upstream 100 bases:
>100_bases AATAAGCCTATCGCTCTCATCAACATGATGGATTACGGCATGACAAAAGGCGATAAGATCCTCGCTCAAGCATTAGATAT GATGGACTAAGGCTAAAATT
Downstream 100 bases:
>100_bases TAGATACATTTATAGGGGGGGGCAACTCCCCTATTTTCAGTAAGTTGATGCTATATAAGCGTGAGGGGTCAAATTTTTAA ATTTCTTTCTTATAACTCTT
Product: PTS system, lactose/cellobiose specific IIA subunit
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Chb; EIII-Chb; PTS system N,N'-diacetylchitobiose-specific EIIA component [H]
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MDSEEYEEKVMMLLVNAGSARSQLMEAMRAARQKNFELSDKHIEGAQAALKEAHSIQTRLIEFDEGEGKLPVHIVMVHAQ DHLMNAVLLMDMATEIIYLHKERMIS
Sequences:
>Translated_106_residues MDSEEYEEKVMMLLVNAGSARSQLMEAMRAARQKNFELSDKHIEGAQAALKEAHSIQTRLIEFDEGEGKLPVHIVMVHAQ DHLMNAVLLMDMATEIIYLHKERMIS >Mature_106_residues MDSEEYEEKVMMLLVNAGSARSQLMEAMRAARQKNFELSDKHIEGAQAALKEAHSIQTRLIEFDEGEGKLPVHIVMVHAQ DHLMNAVLLMDMATEIIYLHKERMIS
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG1447
COG function: function code G; Phosphotransferase system cellobiose-specific component IIA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788031, Length=101, Percent_Identity=46.5346534653465, Blast_Score=94, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003188 [H]
Pfam domain/function: PF02255 PTS_IIA [H]
EC number: 2.7.1.69
Molecular weight: Translated: 12095; Mature: 12095
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS51095 PTS_EIIA_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 9.4 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 9.4 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSEEYEEKVMMLLVNAGSARSQLMEAMRAARQKNFELSDKHIEGAQAALKEAHSIQTRL CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH IEFDEGEGKLPVHIVMVHAQDHLMNAVLLMDMATEIIYLHKERMIS EECCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDSEEYEEKVMMLLVNAGSARSQLMEAMRAARQKNFELSDKHIEGAQAALKEAHSIQTRL CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH IEFDEGEGKLPVHIVMVHAQDHLMNAVLLMDMATEIIYLHKERMIS EECCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]