The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695040

Identifier: 209695040

GI number: 209695040

Start: 1635734

End: 1636627

Strand: Direct

Name: 209695040

Synonym: VSAL_I1535

Alternate gene names: NA

Gene position: 1635734-1636627 (Clockwise)

Preceding gene: 209695038

Following gene: 209695041

Centisome position: 49.19

GC content: 40.16

Gene sequence:

>894_bases
ATGACTATTCTTTTGCTGTTACAAATTAGCCTTATTATTGGTGGGTTAATTTTTCTTTATATGTTGATTTCATTATGGCT
CAGAAAAAAAGAATCAGAGAAAAAAACGAACGTATGGGCGATTGGTCTGATTGGTGGTTTTGCTAACTTTTGCGACACGT
TAGGTGTAGGCAGTTTTGCAATAAAAACGGCGGGCTATAAACAATTTAATTTGGTTGATGACCGAGTATTACCTGGGACA
TTAAACGCTCAAGCGACGATGGCGACAGTATTTCAAGCATTGATTTTCTTAACTGCAGTTAATGTTGATTTAACCACGTT
ATTGAGCCTAATTATTGCGGCTTGTGTCGGGGCAACGGTAGGGGCTCGCTTGGTATCCAATTTTGATCGTCAATTGATTC
GTTTAATTATGGCTGGTGCGTTATTTATTGTTGCGATGTTGATGTTTGCTGGTCGTTTTGAATTATTCCCATTGGGCGGT
GATGAGCTCGGTCTCTCGGGTGAAAAATTAGTTATTGCTGTTATTGGTAATTTTATTTTTGGTGCCTTGATGACGGTTGG
TATTGGGTTGTACGCGCCTTGTATGACGATGATTTATTTATTAGGGATGAACCCACTGGCGGCTTTTCCTATTATGATGT
GTTCATGTGCTTTCTTATGTTTTTTCTCTGCCGGTGGCTTTATTAAACAAAAAGCCGTGAATTCTAGGGCCTCATTGGTT
GTGGCCATTACAGGGCCGATTGGGGTATTGATTGCTGCTTTTATCGTGAAGTCTCTTGATGTTGATATGCTTGCTTGGCT
AGTGGCAATTGTTGTTCTATATACCGCCATTATGATGCTACGTTCTTGGTGTGCAGGCCGAAATGAGGTGATGATTGAAT
CAACCGATCAATAA

Upstream 100 bases:

>100_bases
TGGCATTATCTCTCGTCCCTTTTGTTATAAGGCGTCTCTCTGGTTTTTACCCGTAAACTGGATTATGATTTGCGGCTTTC
CTGTTGCTGTGTAAATTATC

Downstream 100 bases:

>100_bases
ATAGTCGATAAAGCATCATTTTCTATCACATAATTATTGGAGTTATAAAAAGTTCATGGTATTTTTCGTACACCAATTTT
TTATGGATGTTTTATCATGC

Product: membrane protein

Products: NA

Alternate protein names: Membrane Family Protein; Permease; Na+/Solute Symporter

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MTILLLLQISLIIGGLIFLYMLISLWLRKKESEKKTNVWAIGLIGGFANFCDTLGVGSFAIKTAGYKQFNLVDDRVLPGT
LNAQATMATVFQALIFLTAVNVDLTTLLSLIIAACVGATVGARLVSNFDRQLIRLIMAGALFIVAMLMFAGRFELFPLGG
DELGLSGEKLVIAVIGNFIFGALMTVGIGLYAPCMTMIYLLGMNPLAAFPIMMCSCAFLCFFSAGGFIKQKAVNSRASLV
VAITGPIGVLIAAFIVKSLDVDMLAWLVAIVVLYTAIMMLRSWCAGRNEVMIESTDQ

Sequences:

>Translated_297_residues
MTILLLLQISLIIGGLIFLYMLISLWLRKKESEKKTNVWAIGLIGGFANFCDTLGVGSFAIKTAGYKQFNLVDDRVLPGT
LNAQATMATVFQALIFLTAVNVDLTTLLSLIIAACVGATVGARLVSNFDRQLIRLIMAGALFIVAMLMFAGRFELFPLGG
DELGLSGEKLVIAVIGNFIFGALMTVGIGLYAPCMTMIYLLGMNPLAAFPIMMCSCAFLCFFSAGGFIKQKAVNSRASLV
VAITGPIGVLIAAFIVKSLDVDMLAWLVAIVVLYTAIMMLRSWCAGRNEVMIESTDQ
>Mature_296_residues
TILLLLQISLIIGGLIFLYMLISLWLRKKESEKKTNVWAIGLIGGFANFCDTLGVGSFAIKTAGYKQFNLVDDRVLPGTL
NAQATMATVFQALIFLTAVNVDLTTLLSLIIAACVGATVGARLVSNFDRQLIRLIMAGALFIVAMLMFAGRFELFPLGGD
ELGLSGEKLVIAVIGNFIFGALMTVGIGLYAPCMTMIYLLGMNPLAAFPIMMCSCAFLCFFSAGGFIKQKAVNSRASLVV
AITGPIGVLIAAFIVKSLDVDMLAWLVAIVVLYTAIMMLRSWCAGRNEVMIESTDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31954; Mature: 31823

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILLLLQISLIIGGLIFLYMLISLWLRKKESEKKTNVWAIGLIGGFANFCDTLGVGSFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEEHHHHHHHHHHHHHCCCCHH
IKTAGYKQFNLVDDRVLPGTLNAQATMATVFQALIFLTAVNVDLTTLLSLIIAACVGATV
HHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GARLVSNFDRQLIRLIMAGALFIVAMLMFAGRFELFPLGGDELGLSGEKLVIAVIGNFIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
GALMTVGIGLYAPCMTMIYLLGMNPLAAFPIMMCSCAFLCFFSAGGFIKQKAVNSRASLV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEE
VAITGPIGVLIAAFIVKSLDVDMLAWLVAIVVLYTAIMMLRSWCAGRNEVMIESTDQ
EEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
>Mature Secondary Structure 
TILLLLQISLIIGGLIFLYMLISLWLRKKESEKKTNVWAIGLIGGFANFCDTLGVGSFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEEHHHHHHHHHHHHHCCCCHH
IKTAGYKQFNLVDDRVLPGTLNAQATMATVFQALIFLTAVNVDLTTLLSLIIAACVGATV
HHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GARLVSNFDRQLIRLIMAGALFIVAMLMFAGRFELFPLGGDELGLSGEKLVIAVIGNFIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
GALMTVGIGLYAPCMTMIYLLGMNPLAAFPIMMCSCAFLCFFSAGGFIKQKAVNSRASLV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEE
VAITGPIGVLIAAFIVKSLDVDMLAWLVAIVVLYTAIMMLRSWCAGRNEVMIESTDQ
EEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA