The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695038

Identifier: 209695038

GI number: 209695038

Start: 1634028

End: 1634342

Strand: Direct

Name: 209695038

Synonym: VSAL_I1533

Alternate gene names: NA

Gene position: 1634028-1634342 (Clockwise)

Preceding gene: 209695037

Following gene: 209695040

Centisome position: 49.14

GC content: 36.51

Gene sequence:

>315_bases
ATGCTCGTTCTAATGAGCAACGAGTGTAATGGTATCAAGGAGAAAACAATGGCTTACGTAGAACCAATTAAAAGTAGGAA
ACACCTTCGTTACGCAGAAGAGTACTTAAAGATGAACCATGATCCTACCTTTACTCTTATATGGAAAATAGGGCTAGAAA
CAGGGTTAAGGATCAGCGGTATATTATCAATGAAATACAGTGATATTAATTATTCAATGGGACGTTGTGAGATTATTGAG
AGTAAGGGCACGTTAGCTCGAAAAACGAAAGCTAAACTTTATTGCCTTAGTTTTAAGGAGGCATTACGAAGATAA

Upstream 100 bases:

>100_bases
TTATGTCTAAAATACTTAAATTTCATATTGTTAAAGGTGTTTAATTTTATTGATAAATACAATAATTACGAGTATGGCAG
TTTGATAGACTATAATTATT

Downstream 100 bases:

>100_bases
GAACATCATGAGCTTTGCTATGTTGTTTTTATTAAATAACAGGTTTTCCTATTTCCGAAGTGACAGCACAAAGTGATTTG
AATTATCTATTATATTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MLVLMSNECNGIKEKTMAYVEPIKSRKHLRYAEEYLKMNHDPTFTLIWKIGLETGLRISGILSMKYSDINYSMGRCEIIE
SKGTLARKTKAKLYCLSFKEALRR

Sequences:

>Translated_104_residues
MLVLMSNECNGIKEKTMAYVEPIKSRKHLRYAEEYLKMNHDPTFTLIWKIGLETGLRISGILSMKYSDINYSMGRCEIIE
SKGTLARKTKAKLYCLSFKEALRR
>Mature_104_residues
MLVLMSNECNGIKEKTMAYVEPIKSRKHLRYAEEYLKMNHDPTFTLIWKIGLETGLRISGILSMKYSDINYSMGRCEIIE
SKGTLARKTKAKLYCLSFKEALRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12099; Mature: 12099

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLMSNECNGIKEKTMAYVEPIKSRKHLRYAEEYLKMNHDPTFTLIWKIGLETGLRISG
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEE
ILSMKYSDINYSMGRCEIIESKGTLARKTKAKLYCLSFKEALRR
EEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHCC
>Mature Secondary Structure
MLVLMSNECNGIKEKTMAYVEPIKSRKHLRYAEEYLKMNHDPTFTLIWKIGLETGLRISG
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEE
ILSMKYSDINYSMGRCEIIESKGTLARKTKAKLYCLSFKEALRR
EEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA