Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209695038
Identifier: 209695038
GI number: 209695038
Start: 1634028
End: 1634342
Strand: Direct
Name: 209695038
Synonym: VSAL_I1533
Alternate gene names: NA
Gene position: 1634028-1634342 (Clockwise)
Preceding gene: 209695037
Following gene: 209695040
Centisome position: 49.14
GC content: 36.51
Gene sequence:
>315_bases ATGCTCGTTCTAATGAGCAACGAGTGTAATGGTATCAAGGAGAAAACAATGGCTTACGTAGAACCAATTAAAAGTAGGAA ACACCTTCGTTACGCAGAAGAGTACTTAAAGATGAACCATGATCCTACCTTTACTCTTATATGGAAAATAGGGCTAGAAA CAGGGTTAAGGATCAGCGGTATATTATCAATGAAATACAGTGATATTAATTATTCAATGGGACGTTGTGAGATTATTGAG AGTAAGGGCACGTTAGCTCGAAAAACGAAAGCTAAACTTTATTGCCTTAGTTTTAAGGAGGCATTACGAAGATAA
Upstream 100 bases:
>100_bases TTATGTCTAAAATACTTAAATTTCATATTGTTAAAGGTGTTTAATTTTATTGATAAATACAATAATTACGAGTATGGCAG TTTGATAGACTATAATTATT
Downstream 100 bases:
>100_bases GAACATCATGAGCTTTGCTATGTTGTTTTTATTAAATAACAGGTTTTCCTATTTCCGAAGTGACAGCACAAAGTGATTTG AATTATCTATTATATTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MLVLMSNECNGIKEKTMAYVEPIKSRKHLRYAEEYLKMNHDPTFTLIWKIGLETGLRISGILSMKYSDINYSMGRCEIIE SKGTLARKTKAKLYCLSFKEALRR
Sequences:
>Translated_104_residues MLVLMSNECNGIKEKTMAYVEPIKSRKHLRYAEEYLKMNHDPTFTLIWKIGLETGLRISGILSMKYSDINYSMGRCEIIE SKGTLARKTKAKLYCLSFKEALRR >Mature_104_residues MLVLMSNECNGIKEKTMAYVEPIKSRKHLRYAEEYLKMNHDPTFTLIWKIGLETGLRISGILSMKYSDINYSMGRCEIIE SKGTLARKTKAKLYCLSFKEALRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12099; Mature: 12099
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLMSNECNGIKEKTMAYVEPIKSRKHLRYAEEYLKMNHDPTFTLIWKIGLETGLRISG CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEE ILSMKYSDINYSMGRCEIIESKGTLARKTKAKLYCLSFKEALRR EEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHCC >Mature Secondary Structure MLVLMSNECNGIKEKTMAYVEPIKSRKHLRYAEEYLKMNHDPTFTLIWKIGLETGLRISG CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEE ILSMKYSDINYSMGRCEIIESKGTLARKTKAKLYCLSFKEALRR EEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA