Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209695010
Identifier: 209695010
GI number: 209695010
Start: 1608471
End: 1608926
Strand: Direct
Name: 209695010
Synonym: VSAL_I1502
Alternate gene names: NA
Gene position: 1608471-1608926 (Clockwise)
Preceding gene: 209695008
Following gene: 209695012
Centisome position: 48.37
GC content: 36.84
Gene sequence:
>456_bases ATGGATACGATACTTGAGCTAAATGAGCAGTTTGTAAAGGTATTAAGCCCAATGGATAAAAGTAAATTAGTTCGATTAAT TGAAATGTCGGCGATATCCGTTGTGATTGAAGAAGATGACCGCATTGCTGGCTTTTTATTGGCATTTACTCAAGGTGTGA AATACGAAAGCATTAACTATGAATGGTTTAATGAGAATTACGATTCATTTTTGTATATTGATAGGATCGTGGTTTCTGAT CAGTTTCAAGGGAAAGGAGTGGCATCAACACTCTATAAGCTGGCTCTAAATTGGGCAACAGAGCGATCATTATTGCGTGT TGTTGCTGAAATCGATGTGATGCCACCGAACGAACCTTCGTTACTCTTCCATCAAAAAATGGGCTTTAAAGAGATTGAGT TATTAACGCATAATGAGAACAAAAAGGTGTCTTTGCAAGAATTAACGATAAGTTAG
Upstream 100 bases:
>100_bases ACTGAGGTTAATGCGTGATAGAGACCACGTTTTTGATTGATTACACAAGCATGATGAACAAGGAGTCAGCGTGATAATTA GAACCATTTTAGACAAAGAC
Downstream 100 bases:
>100_bases TTTTTTAACGAAACAGAGAGAAACCTCGGATTTTGTTTCCGAGGTTATTAATGATGAACTTATGAGCATGAACCACAACA AACACCTGGTTCTCCGTGTT
Product: acyltransferase
Products: NA
Alternate protein names: GNAT Family Acetyltransferase; Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Gnat Family; GNAT Family Protein Acetyltransferase; Acyltransferase; Acetyltransferase Gnat Family Protein; Gnat Family Acetyltransferase
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MDTILELNEQFVKVLSPMDKSKLVRLIEMSAISVVIEEDDRIAGFLLAFTQGVKYESINYEWFNENYDSFLYIDRIVVSD QFQGKGVASTLYKLALNWATERSLLRVVAEIDVMPPNEPSLLFHQKMGFKEIELLTHNENKKVSLQELTIS
Sequences:
>Translated_151_residues MDTILELNEQFVKVLSPMDKSKLVRLIEMSAISVVIEEDDRIAGFLLAFTQGVKYESINYEWFNENYDSFLYIDRIVVSD QFQGKGVASTLYKLALNWATERSLLRVVAEIDVMPPNEPSLLFHQKMGFKEIELLTHNENKKVSLQELTIS >Mature_151_residues MDTILELNEQFVKVLSPMDKSKLVRLIEMSAISVVIEEDDRIAGFLLAFTQGVKYESINYEWFNENYDSFLYIDRIVVSD QFQGKGVASTLYKLALNWATERSLLRVVAEIDVMPPNEPSLLFHQKMGFKEIELLTHNENKKVSLQELTIS
Specific function: Unknown
COG id: COG3818
COG function: function code R; Predicted acetyltransferase, GNAT superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17422; Mature: 17422
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTILELNEQFVKVLSPMDKSKLVRLIEMSAISVVIEEDDRIAGFLLAFTQGVKYESINY CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCEECCCCE EWFNENYDSFLYIDRIVVSDQFQGKGVASTLYKLALNWATERSLLRVVAEIDVMPPNEPS EEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LLFHQKMGFKEIELLTHNENKKVSLQELTIS EEEECCCCCEEEEEEECCCCCEEEEEEEECC >Mature Secondary Structure MDTILELNEQFVKVLSPMDKSKLVRLIEMSAISVVIEEDDRIAGFLLAFTQGVKYESINY CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCEECCCCE EWFNENYDSFLYIDRIVVSDQFQGKGVASTLYKLALNWATERSLLRVVAEIDVMPPNEPS EEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LLFHQKMGFKEIELLTHNENKKVSLQELTIS EEEECCCCCEEEEEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA