Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209695008
Identifier: 209695008
GI number: 209695008
Start: 1607153
End: 1607434
Strand: Direct
Name: 209695008
Synonym: VSAL_I1500
Alternate gene names: NA
Gene position: 1607153-1607434 (Clockwise)
Preceding gene: 209695007
Following gene: 209695010
Centisome position: 48.33
GC content: 39.01
Gene sequence:
>282_bases ATGAATGTGGATAAAGCAAAAAAGCGTATAGCAAAACAAGTTAAAAAAGGCTTCAAAGGATATCCTCAGCTTTCTCTGTC CTATTTTGGGAAAACATCAGACTTGGCAACAGAAGTGGTTGTGACGTTTATTTTAGAAGAAGGGGCGGAGCCTCAAGAGC AAAAGTTTGCCAGTGAAAATGATGTTCGAGAAGATGAAACCATTCAATCGGTGTTAGTTAAAATTATCGATCGTGCTGAT GCAAATAGCGTGATGGAAGTGGAAGGTGTAGTCATTCTTTAG
Upstream 100 bases:
>100_bases TGCTTTAGGTGGTAAATTGAAACTCTCGCTAGCATCATTAGCGTGTTATGTTGACGATGTATTGGAATTATTCAAGCTCA GTAAGCACAAGGATTAAGTT
Downstream 100 bases:
>100_bases TTTGGCTTTACATTAAACAGCCCAATGACACGACTGCTTATAAGTAGGGTGTCATTGGGGTTTTACCCATAATAAGGTTA AGACAACGCATTAAAACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MNVDKAKKRIAKQVKKGFKGYPQLSLSYFGKTSDLATEVVVTFILEEGAEPQEQKFASENDVREDETIQSVLVKIIDRAD ANSVMEVEGVVIL
Sequences:
>Translated_93_residues MNVDKAKKRIAKQVKKGFKGYPQLSLSYFGKTSDLATEVVVTFILEEGAEPQEQKFASENDVREDETIQSVLVKIIDRAD ANSVMEVEGVVIL >Mature_93_residues MNVDKAKKRIAKQVKKGFKGYPQLSLSYFGKTSDLATEVVVTFILEEGAEPQEQKFASENDVREDETIQSVLVKIIDRAD ANSVMEVEGVVIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10362; Mature: 10362
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVDKAKKRIAKQVKKGFKGYPQLSLSYFGKTSDLATEVVVTFILEEGAEPQEQKFASEN CCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCC DVREDETIQSVLVKIIDRADANSVMEVEGVVIL CCCCHHHHHHHHHHHHHCCCCCCEEEECCEEEC >Mature Secondary Structure MNVDKAKKRIAKQVKKGFKGYPQLSLSYFGKTSDLATEVVVTFILEEGAEPQEQKFASEN CCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCC DVREDETIQSVLVKIIDRADANSVMEVEGVVIL CCCCHHHHHHHHHHHHHCCCCCCEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA