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The map label for this gene is ybgL [C]

Identifier: 209694955

GI number: 209694955

Start: 1550854

End: 1551594

Strand: Direct

Name: ybgL [C]

Synonym: VSAL_I1436

Alternate gene names: 209694955

Gene position: 1550854-1551594 (Clockwise)

Preceding gene: 209694954

Following gene: 209694956

Centisome position: 46.64

GC content: 44.67

Gene sequence:

>741_bases
ATGAAGATTAATTGTGATATGGGTGAAAGTTTTGGATTATGGGCGTTAGGTGAAGATGCCGCCGTTATGCCAGCGTTAGA
TATGGCGAATATTGCGTGTGGTATGCATGCTTCGGATCCAAGCGTAATGATGAAAACCGTTGCGCTAGCAAAAGACAATG
GCGTGATGGTTGGTGCTCATCCCGGCTACAACGATCTACAAGGCTTTGGCCGACGTGATATTGCAATGAACGCTACAGAT
TTAGCTGCGTTATTTATCTATCAATTGGGTGCATTGCAGGGGATATGTCAAAGTCAAAATACAAGATTAAGTTACGTGAA
ACCTCATGGTGCGTTATACAACGCGATGATGAAAGACGATGCGATTCTTGAAACCTTATTGGGTGCATTACAGCGTTACG
ATGTCACTTTACCTTTCGTGGTAATGGCGGTGCCTGACCACGCTCGCTATCAAACGTTGGCCGATAAATTTGGCATTACA
TTATGGTTTGAGGCGTTTGTTGACCGAGCTTATGACGAAGAAGGTCGACTCGTGCCACGCAGTGTACCTAATTCAAGTCA
CTATACCGATGAAGCGATTCAACACCAAGCCGATCAATTGATTGATCAAGGTTGTGTCACCACTCTTTCCGGAAAAACAA
TCGCGATTCACGCAGATACCTTATGTATTCATGGTGAGGGCCCTTTTGCGGTATCGACAGCGACGTATTTACGTAAAAAG
TTGCAGAAAAAGGCGGAGTAA

Upstream 100 bases:

>100_bases
TCACCGACCGCTTAAGTTCTGAGTTTGCCGTGCTCTAGTTATTCAGGGTTGCCATCACTGTGCTGTTACCAAACAACGAG
CCAATAATTAAGGAAATGGA

Downstream 100 bases:

>100_bases
TCATGAAAATATCAGCCGTTAATGAGTCCACTGTTTTAGTTGTATTTTCCGATACGGTTAGTCCTGAAACTGCCGATATT
ATTGCTCAATCCGTTGCTAT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKINCDMGESFGLWALGEDAAVMPALDMANIACGMHASDPSVMMKTVALAKDNGVMVGAHPGYNDLQGFGRRDIAMNATD
LAALFIYQLGALQGICQSQNTRLSYVKPHGALYNAMMKDDAILETLLGALQRYDVTLPFVVMAVPDHARYQTLADKFGIT
LWFEAFVDRAYDEEGRLVPRSVPNSSHYTDEAIQHQADQLIDQGCVTTLSGKTIAIHADTLCIHGEGPFAVSTATYLRKK
LQKKAE

Sequences:

>Translated_246_residues
MKINCDMGESFGLWALGEDAAVMPALDMANIACGMHASDPSVMMKTVALAKDNGVMVGAHPGYNDLQGFGRRDIAMNATD
LAALFIYQLGALQGICQSQNTRLSYVKPHGALYNAMMKDDAILETLLGALQRYDVTLPFVVMAVPDHARYQTLADKFGIT
LWFEAFVDRAYDEEGRLVPRSVPNSSHYTDEAIQHQADQLIDQGCVTTLSGKTIAIHADTLCIHGEGPFAVSTATYLRKK
LQKKAE
>Mature_246_residues
MKINCDMGESFGLWALGEDAAVMPALDMANIACGMHASDPSVMMKTVALAKDNGVMVGAHPGYNDLQGFGRRDIAMNATD
LAALFIYQLGALQGICQSQNTRLSYVKPHGALYNAMMKDDAILETLLGALQRYDVTLPFVVMAVPDHARYQTLADKFGIT
LWFEAFVDRAYDEEGRLVPRSVPNSSHYTDEAIQHQADQLIDQGCVTTLSGKTIAIHADTLCIHGEGPFAVSTATYLRKK
LQKKAE

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=246, Percent_Identity=34.1463414634146, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26847; Mature: 26847

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINCDMGESFGLWALGEDAAVMPALDMANIACGMHASDPSVMMKTVALAKDNGVMVGAH
CEEECCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHEECCCCEEEECC
PGYNDLQGFGRRDIAMNATDLAALFIYQLGALQGICQSQNTRLSYVKPHGALYNAMMKDD
CCCHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
AILETLLGALQRYDVTLPFVVMAVPDHARYQTLADKFGITLWFEAFVDRAYDEEGRLVPR
HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCC
SVPNSSHYTDEAIQHQADQLIDQGCVTTLSGKTIAIHADTLCIHGEGPFAVSTATYLRKK
CCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCEEEEEECEEEEECCCCEEEHHHHHHHHH
LQKKAE
HHHHCC
>Mature Secondary Structure
MKINCDMGESFGLWALGEDAAVMPALDMANIACGMHASDPSVMMKTVALAKDNGVMVGAH
CEEECCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHEECCCCEEEECC
PGYNDLQGFGRRDIAMNATDLAALFIYQLGALQGICQSQNTRLSYVKPHGALYNAMMKDD
CCCHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
AILETLLGALQRYDVTLPFVVMAVPDHARYQTLADKFGITLWFEAFVDRAYDEEGRLVPR
HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCC
SVPNSSHYTDEAIQHQADQLIDQGCVTTLSGKTIAIHADTLCIHGEGPFAVSTATYLRKK
CCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCEEEEEECEEEEECCCCEEEHHHHHHHHH
LQKKAE
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA