Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is rimJ [C]
Identifier: 209694951
GI number: 209694951
Start: 1544754
End: 1545284
Strand: Direct
Name: rimJ [C]
Synonym: VSAL_I1431
Alternate gene names: 209694951
Gene position: 1544754-1545284 (Clockwise)
Preceding gene: 209694945
Following gene: 209694952
Centisome position: 46.46
GC content: 36.91
Gene sequence:
>531_bases ATGGCGGTATTACATCTACTTACGATAGACGATACATCAGCATTGCTGGCGTTTGAATTGGCGAATAAAGAATGGTTTGA ATCTTTTATTGAAGCGAGAGATGACGATTTTTTTGATGACGAAGGCATAAAAGCACACATTGTTTGTTGTCTTTCTGAAT ACGAGAAAGGGAAAACATACCCAATGCTACTTAAAGATGATCTTGGTGTTATTTGTGGTCGAGCCAATCTTTACAATATT AATAAAGAAAAGGAATCGGCGTCTATTGGGTATCGAATTGGTGAAGATTTTGTTTCAAAAGGACTTGCAACCTGCGCGAC CAAAATATTGATTGATATTGCTAAAGACACATTGGGGTTATCATCACTGACAGCGAGCGCATCGACTGACAATTTTGCAT CGCAACAGGTATTAAAGAAAAATGGCTTTAAACAAGTTGGATTTAAGCCTGAATTTACCATTGTGGATGGTGAGATTATA GATTGTTATGAATATCGCTGTGTAATTAAGCAGTTGTCTGTAGCGATATAA
Upstream 100 bases:
>100_bases GATAAAGATAAAGATAAAAATAAAAAGCCGCGAGCCTATCTCGCGGCTTTTTTTGTCTATAATCAGGTAAAGCAAGTCAT AAAAATAAGAGGGATTGGCT
Downstream 100 bases:
>100_bases AGTGAATATAGAAGTAGGCTGAGGCTTACTATATAATTCCTTTTTTTTGAAAGGAGTTCCTATAATGGAAATGATCATAG TCTCTTCTGAAAGACAAAAA
Product: acetyltransferase
Products: CoA; ribosomal-protein N-acetyl-L-alanine
Alternate protein names: Acetyltransferase; Ribosomal-Protein-Alanine Acetyltransferase; Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; GNAT Family Acetyltransferase; Ribosomal Protein N-Acetylase; Ribosome Protein Acetyltransferase
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MAVLHLLTIDDTSALLAFELANKEWFESFIEARDDDFFDDEGIKAHIVCCLSEYEKGKTYPMLLKDDLGVICGRANLYNI NKEKESASIGYRIGEDFVSKGLATCATKILIDIAKDTLGLSSLTASASTDNFASQQVLKKNGFKQVGFKPEFTIVDGEII DCYEYRCVIKQLSVAI
Sequences:
>Translated_176_residues MAVLHLLTIDDTSALLAFELANKEWFESFIEARDDDFFDDEGIKAHIVCCLSEYEKGKTYPMLLKDDLGVICGRANLYNI NKEKESASIGYRIGEDFVSKGLATCATKILIDIAKDTLGLSSLTASASTDNFASQQVLKKNGFKQVGFKPEFTIVDGEII DCYEYRCVIKQLSVAI >Mature_175_residues AVLHLLTIDDTSALLAFELANKEWFESFIEARDDDFFDDEGIKAHIVCCLSEYEKGKTYPMLLKDDLGVICGRANLYNIN KEKESASIGYRIGEDFVSKGLATCATKILIDIAKDTLGLSSLTASASTDNFASQQVLKKNGFKQVGFKPEFTIVDGEIID CYEYRCVIKQLSVAI
Specific function: This Enzyme Acetylates The N-Terminal Alanine Of Ribosomal Protein S5. Plays Also A Role In The Temperature Regulation Of Pap Pilin Transcription. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.128
Molecular weight: Translated: 19543; Mature: 19411
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLHLLTIDDTSALLAFELANKEWFESFIEARDDDFFDDEGIKAHIVCCLSEYEKGKTY CEEEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHCCCCCC PMLLKDDLGVICGRANLYNINKEKESASIGYRIGEDFVSKGLATCATKILIDIAKDTLGL CEEEECCCCEEECCCEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCH SSLTASASTDNFASQQVLKKNGFKQVGFKPEFTIVDGEIIDCYEYRCVIKQLSVAI HHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCEEHHHHHHHHHHHHHHCC >Mature Secondary Structure AVLHLLTIDDTSALLAFELANKEWFESFIEARDDDFFDDEGIKAHIVCCLSEYEKGKTY EEEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHCCCCCC PMLLKDDLGVICGRANLYNINKEKESASIGYRIGEDFVSKGLATCATKILIDIAKDTLGL CEEEECCCCEEECCCEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCH SSLTASASTDNFASQQVLKKNGFKQVGFKPEFTIVDGEIIDCYEYRCVIKQLSVAI HHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acetyl-CoA; ribosomal-protein L-alanine
Specific reaction: acetyl-CoA + ribosomal-protein L-alanine = CoA + ribosomal-protein N-acetyl-L-alanine
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA