Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is tyrP [H]
Identifier: 209694867
GI number: 209694867
Start: 1452557
End: 1453711
Strand: Direct
Name: tyrP [H]
Synonym: VSAL_I1337
Alternate gene names: 209694867
Gene position: 1452557-1453711 (Clockwise)
Preceding gene: 209694865
Following gene: 209694868
Centisome position: 43.68
GC content: 39.83
Gene sequence:
>1155_bases ATGAATTTAAAATTAATTGGCAGCTCGCTTATTATTTCAGGTACTGCGTTAGGCGCAGGCATGCTTGCTATACCTATGGT ACTGGCTCAATTTGGGCTCTTGTGGGGAACAGCATTAATGCTGTTTATCTGTATCGGTACAACCTATGCGGCACTATTAT TACTTGAAGCAAGTATTAATGTCGGCGGTGGGTTAGGAATGAACACGATTGCGCGTAAAACCTTAGGTAAAGGTGGGCAA GTTGTGACGAATGGTTTGCTGTATGCATTACTGATTTGTTTATTAATGGCGTACATCTTAGGGGCCGGTGATTTACTCAA TAAACTTGTTCGTAGTATTGGGATGGACTTGAGCCTTGTTCAAAGTCAAATTGCATTTACCTTAATTGCAGGGGCGATTG TTGCTTCAGGTACGGCGGTTATTGATAAACTGAACCGAGTTTTATTTGCGGTGATGTTAGGTATGCTGCTATTGACGTTA GTTTTCTTAGTGCCTGGTATTTCTGCTGAAAATATGGTGCAAGTGTCTAATTCTAATATGCCCGATCTCATTAAGACCAG CTCAATTATCTTCACCAGTTTTGGTTTTATGGTTGTGATCCCATCATTAGTTTCTTATAACCATGAAGCGACGCATAAGC AATTGAGAAATATGGTCATTGTTGGCTCTCTTATTCCGCTTGTGTGTTACTTAGTTTGGTTATATGCGGTTGTTGGTAAT TTAACCTCTAAGCAATTAGTCGAGTTTTCTAATGTCTCTGAATTGATTTCGGTCTTCAGTGCAGAGCATGCTTTCATTAA TGTAGTGTTGTCGAGCTTTACTGGTCTTGCTTTATTAACGTCATTCTTAGGGGTGGCAATGGCTTTGTTTACTCAAAACC AAGATACTTTCAAGCAAAATAAAGTGATCACTTATGTGATTAGTTTTATCTTCCCATTAGCGGGTGCCATTTTAGCGGCA GATAAGTTCTTAGCCGTATTAAGTTATGCAGGGATCATCCTTGTGTTCCTTGCTGTCTTTGTTCCGTTAGCGATGGTTGT TAAATTAAGACAGAAAGAAACGAACGAACAGGGATATAAAGCTGAGGGTGGAGTAGCAATGCTGGCATTCTCTTTTGCAT TCGGTAGCTTCTTACTCGTTTCTCAAGTGTTATAA
Upstream 100 bases:
>100_bases AATTTTAACGCTGTCGCCTAGTAAAGGTGCTGTTTTGTATGCGTTGAATTTATAAAAAATAAAATAAATTTACTCGAATT AAACATAGGAAATAAACACA
Downstream 100 bases:
>100_bases CTCTTTTAATGCCCTAATCATGGTATTAGGGTATTCATTTATACTGTGACTGTTTTTCCATTTTATATATTAAGAATACA CAATGAATTTTAAATTATTT
Product: tyrosine-specific transport protein (tyrosine permease)
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MNLKLIGSSLIISGTALGAGMLAIPMVLAQFGLLWGTALMLFICIGTTYAALLLLEASINVGGGLGMNTIARKTLGKGGQ VVTNGLLYALLICLLMAYILGAGDLLNKLVRSIGMDLSLVQSQIAFTLIAGAIVASGTAVIDKLNRVLFAVMLGMLLLTL VFLVPGISAENMVQVSNSNMPDLIKTSSIIFTSFGFMVVIPSLVSYNHEATHKQLRNMVIVGSLIPLVCYLVWLYAVVGN LTSKQLVEFSNVSELISVFSAEHAFINVVLSSFTGLALLTSFLGVAMALFTQNQDTFKQNKVITYVISFIFPLAGAILAA DKFLAVLSYAGIILVFLAVFVPLAMVVKLRQKETNEQGYKAEGGVAMLAFSFAFGSFLLVSQVL
Sequences:
>Translated_384_residues MNLKLIGSSLIISGTALGAGMLAIPMVLAQFGLLWGTALMLFICIGTTYAALLLLEASINVGGGLGMNTIARKTLGKGGQ VVTNGLLYALLICLLMAYILGAGDLLNKLVRSIGMDLSLVQSQIAFTLIAGAIVASGTAVIDKLNRVLFAVMLGMLLLTL VFLVPGISAENMVQVSNSNMPDLIKTSSIIFTSFGFMVVIPSLVSYNHEATHKQLRNMVIVGSLIPLVCYLVWLYAVVGN LTSKQLVEFSNVSELISVFSAEHAFINVVLSSFTGLALLTSFLGVAMALFTQNQDTFKQNKVITYVISFIFPLAGAILAA DKFLAVLSYAGIILVFLAVFVPLAMVVKLRQKETNEQGYKAEGGVAMLAFSFAFGSFLLVSQVL >Mature_384_residues MNLKLIGSSLIISGTALGAGMLAIPMVLAQFGLLWGTALMLFICIGTTYAALLLLEASINVGGGLGMNTIARKTLGKGGQ VVTNGLLYALLICLLMAYILGAGDLLNKLVRSIGMDLSLVQSQIAFTLIAGAIVASGTAVIDKLNRVLFAVMLGMLLLTL VFLVPGISAENMVQVSNSNMPDLIKTSSIIFTSFGFMVVIPSLVSYNHEATHKQLRNMVIVGSLIPLVCYLVWLYAVVGN LTSKQLVEFSNVSELISVFSAEHAFINVVLSSFTGLALLTSFLGVAMALFTQNQDTFKQNKVITYVISFIFPLAGAILAA DKFLAVLSYAGIILVFLAVFVPLAMVVKLRQKETNEQGYKAEGGVAMLAFSFAFGSFLLVSQVL
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=391, Percent_Identity=34.7826086956522, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1789552, Length=370, Percent_Identity=25.6756756756757, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1790145, Length=377, Percent_Identity=26.2599469496021, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 40859; Mature: 40859
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKLIGSSLIISGTALGAGMLAIPMVLAQFGLLWGTALMLFICIGTTYAALLLLEASIN CCCEEECCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VGGGLGMNTIARKTLGKGGQVVTNGLLYALLICLLMAYILGAGDLLNKLVRSIGMDLSLV CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHH QSQIAFTLIAGAIVASGTAVIDKLNRVLFAVMLGMLLLTLVFLVPGISAENMVQVSNSNM HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEECCCCC PDLIKTSSIIFTSFGFMVVIPSLVSYNHEATHKQLRNMVIVGSLIPLVCYLVWLYAVVGN CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LTSKQLVEFSNVSELISVFSAEHAFINVVLSSFTGLALLTSFLGVAMALFTQNQDTFKQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KVITYVISFIFPLAGAILAADKFLAVLSYAGIILVFLAVFVPLAMVVKLRQKETNEQGYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AEGGVAMLAFSFAFGSFLLVSQVL CCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLKLIGSSLIISGTALGAGMLAIPMVLAQFGLLWGTALMLFICIGTTYAALLLLEASIN CCCEEECCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VGGGLGMNTIARKTLGKGGQVVTNGLLYALLICLLMAYILGAGDLLNKLVRSIGMDLSLV CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHH QSQIAFTLIAGAIVASGTAVIDKLNRVLFAVMLGMLLLTLVFLVPGISAENMVQVSNSNM HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEECCCCC PDLIKTSSIIFTSFGFMVVIPSLVSYNHEATHKQLRNMVIVGSLIPLVCYLVWLYAVVGN CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LTSKQLVEFSNVSELISVFSAEHAFINVVLSSFTGLALLTSFLGVAMALFTQNQDTFKQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KVITYVISFIFPLAGAILAADKFLAVLSYAGIILVFLAVFVPLAMVVKLRQKETNEQGYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AEGGVAMLAFSFAFGSFLLVSQVL CCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503 [H]