The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694847

Identifier: 209694847

GI number: 209694847

Start: 1424901

End: 1425347

Strand: Direct

Name: 209694847

Synonym: VSAL_I1313

Alternate gene names: NA

Gene position: 1424901-1425347 (Clockwise)

Preceding gene: 209694846

Following gene: 209694848

Centisome position: 42.85

GC content: 41.16

Gene sequence:

>447_bases
ATGGAACGTGATTATACTTTTGAATGCCTAGTGACGATGCCACGACATGACTTAGAAGAATTCAGTCATCGCGTTGTTAG
TCGTATGGTTCCAGAAGAAACGATGAAAGAGATTTTTACCTTTGATCAAGAAGAAACAGTGAATGAAGACAGAATGCAAA
CGGCTCAACTTGATGCCATGCTTCGTCTTGCTGCTGTGGCTCTTGGTGAGGTGACTCACGCGTTCTCTGAGTCGGATAAT
TCACAACAGAATAGTTTACGTATGATGCGTCTTATTTTATGGCATGCTTATGCGATGTTGTTTAATTTAGAAGAAGCCGT
CACTCTTGAGCAGCACTGTGAATTGGTCGAAACCATTTTGATGAAACCGCCAACAGATGCATTGAATTGGTTGCCTATTT
TGTCTAAATTATTAGGTGATTACGCGAGCATCGCGGCAAAGAAATAA

Upstream 100 bases:

>100_bases
TGCGAACCAAGATCAGTCATCTGCTGAACGTCGTATGCGTCTAAAAAATGCAATCCAGAAGAAAGCTGGCATTACTAAGC
TAAAAAAGTAAGGTTATAAA

Downstream 100 bases:

>100_bases
ATTAAGTTAATCTAATTATCTTTGATAAAACGGCAGTGATAGCAGTATCACTGCCGTTTTTATTTGTTTCCATTTTTTGG
AGATATTACACCCAATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MERDYTFECLVTMPRHDLEEFSHRVVSRMVPEETMKEIFTFDQEETVNEDRMQTAQLDAMLRLAAVALGEVTHAFSESDN
SQQNSLRMMRLILWHAYAMLFNLEEAVTLEQHCELVETILMKPPTDALNWLPILSKLLGDYASIAAKK

Sequences:

>Translated_148_residues
MERDYTFECLVTMPRHDLEEFSHRVVSRMVPEETMKEIFTFDQEETVNEDRMQTAQLDAMLRLAAVALGEVTHAFSESDN
SQQNSLRMMRLILWHAYAMLFNLEEAVTLEQHCELVETILMKPPTDALNWLPILSKLLGDYASIAAKK
>Mature_148_residues
MERDYTFECLVTMPRHDLEEFSHRVVSRMVPEETMKEIFTFDQEETVNEDRMQTAQLDAMLRLAAVALGEVTHAFSESDN
SQQNSLRMMRLILWHAYAMLFNLEEAVTLEQHCELVETILMKPPTDALNWLPILSKLLGDYASIAAKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17152; Mature: 17152

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERDYTFECLVTMPRHDLEEFSHRVVSRMVPEETMKEIFTFDQEETVNEDRMQTAQLDAM
CCCCCCHHHEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHH
LRLAAVALGEVTHAFSESDNSQQNSLRMMRLILWHAYAMLFNLEEAVTLEQHCELVETIL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKPPTDALNWLPILSKLLGDYASIAAKK
CCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERDYTFECLVTMPRHDLEEFSHRVVSRMVPEETMKEIFTFDQEETVNEDRMQTAQLDAM
CCCCCCHHHEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHH
LRLAAVALGEVTHAFSESDNSQQNSLRMMRLILWHAYAMLFNLEEAVTLEQHCELVETIL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKPPTDALNWLPILSKLLGDYASIAAKK
CCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA