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The map label for this gene is 209694342

Identifier: 209694342

GI number: 209694342

Start: 843130

End: 843645

Strand: Direct

Name: 209694342

Synonym: VSAL_I0754

Alternate gene names: NA

Gene position: 843130-843645 (Clockwise)

Preceding gene: 209694340

Following gene: 209694343

Centisome position: 25.36

GC content: 38.57

Gene sequence:

>516_bases
ATGAAAAATACGCATGTCACAATTGGTTTAAGTAACCCAAAAAGTCCGACGAATGTTGGCGCAGTGATGCGTGCTGCTGG
TTGTTATCAAGTGGATGATGTTCGTTATACTGGTGAAAGGTATGACCGTGCTACTAAATTTCAAACCGATACAAAAAAAG
CAGTAAATAAAATCCCGTTAACTAGCGTTGAGTGCTTACTTGATAACTTAGCCGATGACATGAAAATTGTGTGTGTTGAG
TTAGCTGAAGGCGCTGTTTCATTACCTGAATTCAAACACCCAGATAAAGCGATATATGTATTTGGTCCAGAAGATGGTTC
TATCACACAACAAGTGGCTGACCGTGCTGATCACGTTGTTTATATTCCAACCGTGGGCTGCATGAATTTAGCCGCAACGG
TTAATGTACTTTTATATGATCGTTTAGCTAAATCAGTCGATATTGTAAAAGGTGATGAACTGATTCGCAGTAGCCGAGAT
AATAGAAATCACTTAGTTATTAAAGAGAAAGAATAA

Upstream 100 bases:

>100_bases
TGACATTAATCGATATAATCATGATTGATAACTCCAACTATCCCTCTTAGGTTCTCTTTGGTAAAATGCGTGCTCTTTAA
TTTGAGAGTACGGAACAATA

Downstream 100 bases:

>100_bases
TCTTTCTGGATGTTTTTCATATAAGACCTATGCTTTTAAAGTGTGAACACTATATTAAGTAGAGGGAATTATGAAGAAAA
GCATCATCAAAGTCATTGCA

Product: rRNA methylase (SpoU_methylase)

Products: NA

Alternate protein names: RNA Methyltransferase; 23S RRNA Methyltransferase; RNA Methyltransferase TrmH Family; Cold-Shock RNA Methyltransferase; rRNA Methylase; TrmH Family RNA Methyltransferase; TRNA/RRNA MethyltransferaU; rRNA Methyltransferase; SpoU RRNA Methylase Family Protein; SpoU Class RRNA Methylase

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKNTHVTIGLSNPKSPTNVGAVMRAAGCYQVDDVRYTGERYDRATKFQTDTKKAVNKIPLTSVECLLDNLADDMKIVCVE
LAEGAVSLPEFKHPDKAIYVFGPEDGSITQQVADRADHVVYIPTVGCMNLAATVNVLLYDRLAKSVDIVKGDELIRSSRD
NRNHLVIKEKE

Sequences:

>Translated_171_residues
MKNTHVTIGLSNPKSPTNVGAVMRAAGCYQVDDVRYTGERYDRATKFQTDTKKAVNKIPLTSVECLLDNLADDMKIVCVE
LAEGAVSLPEFKHPDKAIYVFGPEDGSITQQVADRADHVVYIPTVGCMNLAATVNVLLYDRLAKSVDIVKGDELIRSSRD
NRNHLVIKEKE
>Mature_171_residues
MKNTHVTIGLSNPKSPTNVGAVMRAAGCYQVDDVRYTGERYDRATKFQTDTKKAVNKIPLTSVECLLDNLADDMKIVCVE
LAEGAVSLPEFKHPDKAIYVFGPEDGSITQQVADRADHVVYIPTVGCMNLAATVNVLLYDRLAKSVDIVKGDELIRSSRD
NRNHLVIKEKE

Specific function: Unknown

COG id: COG0219

COG function: function code J; Predicted rRNA methylase (SpoU class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18894; Mature: 18894

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTHVTIGLSNPKSPTNVGAVMRAAGCYQVDDVRYTGERYDRATKFQTDTKKAVNKIPL
CCCCEEEEEECCCCCCCHHHHHHHHCCCEEECCEEECCHHHHHHHCCCCHHHHHHHCCCC
TSVECLLDNLADDMKIVCVELAEGAVSLPEFKHPDKAIYVFGPEDGSITQQVADRADHVV
HHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEE
YIPTVGCMNLAATVNVLLYDRLAKSVDIVKGDELIRSSRDNRNHLVIKEKE
EECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MKNTHVTIGLSNPKSPTNVGAVMRAAGCYQVDDVRYTGERYDRATKFQTDTKKAVNKIPL
CCCCEEEEEECCCCCCCHHHHHHHHCCCEEECCEEECCHHHHHHHCCCCHHHHHHHCCCC
TSVECLLDNLADDMKIVCVELAEGAVSLPEFKHPDKAIYVFGPEDGSITQQVADRADHVV
HHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEE
YIPTVGCMNLAATVNVLLYDRLAKSVDIVKGDELIRSSRDNRNHLVIKEKE
EECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA