Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209694299
Identifier: 209694299
GI number: 209694299
Start: 797251
End: 797559
Strand: Reverse
Name: 209694299
Synonym: VSAL_I0710
Alternate gene names: NA
Gene position: 797559-797251 (Counterclockwise)
Preceding gene: 209694300
Following gene: 209694291
Centisome position: 23.99
GC content: 35.6
Gene sequence:
>309_bases ATGGAGAATCTCTTTGCGATACTCGGCTTAACGTTTTTTTGCTTTCTATTTTGGCAGCAACGAAGACAATCAGAATTTGC TAACCAAGCAATTCAACATTATTGTAAAAAAATGGAATTACAGCTATTAAGTGTCGCAAGAGGCTCTTATGGTTTTCGTC TACCTAGTGGAAAAAAGCGCCTTTATACTACGTATGAATTTGAATTTTCTTCCATTGGTGATGATCACTATACGGGGAAA TTGATCATGGTTGGATTTAAAGCCGCTAAATTTAATCTACCTCCATATCGTATTGATGGTGAGTTTTAA
Upstream 100 bases:
>100_bases CATTACGTATGTGTATGTTACAAATTCTACACAGTGATGCCGACTCTCAACTGGCTCAAGCATTAGTCAAACTACAGCAA AATACGAAGAGTGAATAAAA
Downstream 100 bases:
>100_bases TACAAACGGTTAAGTGGGTAGTAACTCAATGCTACCCACTTAAGAGCTTAAGTTATACGATGATAATTACCACCACGCCT CCCACATTGCACCCACTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MENLFAILGLTFFCFLFWQQRRQSEFANQAIQHYCKKMELQLLSVARGSYGFRLPSGKKRLYTTYEFEFSSIGDDHYTGK LIMVGFKAAKFNLPPYRIDGEF
Sequences:
>Translated_102_residues MENLFAILGLTFFCFLFWQQRRQSEFANQAIQHYCKKMELQLLSVARGSYGFRLPSGKKRLYTTYEFEFSSIGDDHYTGK LIMVGFKAAKFNLPPYRIDGEF >Mature_102_residues MENLFAILGLTFFCFLFWQQRRQSEFANQAIQHYCKKMELQLLSVARGSYGFRLPSGKKRLYTTYEFEFSSIGDDHYTGK LIMVGFKAAKFNLPPYRIDGEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11999; Mature: 11999
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENLFAILGLTFFCFLFWQQRRQSEFANQAIQHYCKKMELQLLSVARGSYGFRLPSGKKR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCE LYTTYEFEFSSIGDDHYTGKLIMVGFKAAKFNLPPYRIDGEF EEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCEEECCCC >Mature Secondary Structure MENLFAILGLTFFCFLFWQQRRQSEFANQAIQHYCKKMELQLLSVARGSYGFRLPSGKKR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCE LYTTYEFEFSSIGDDHYTGKLIMVGFKAAKFNLPPYRIDGEF EEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA