The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

Click here to switch to the map view.

The map label for this gene is yeiJ [C]

Identifier: 209694208

GI number: 209694208

Start: 677973

End: 679256

Strand: Direct

Name: yeiJ [C]

Synonym: VSAL_I0616

Alternate gene names: 209694208

Gene position: 677973-679256 (Clockwise)

Preceding gene: 209694207

Following gene: 209694209

Centisome position: 20.39

GC content: 43.61

Gene sequence:

>1284_bases
ATGAGCCTGTTAATGAGCTTGGTTGGGATAGTAGCGCTGCTTGCATTTGCAGTACTAATATCTGATAACCGTAAAGCAAT
CAATCTACGTACTGTCGGTGGCGCTTTTGCCATTCAATTTATTCTAGGTGCATTCATACTATACGTACCTGTGGGTCGTG
ATGTACTGTTAGGTGCATCTGAAGCGGTTGCGAATGTAATCAACTACGGTAACACGGGTATCGAATTCTTATTCGGTGGC
TTAGTATCGAATAAAATGTTTGAAGTATTTGGTGGTGGCGGTTTCGTATTCGCACTGCGTGTACTTCCTGTAATCGTGTT
CTTTGCATCACTGACTGCGGTACTTTATTACCTTGGTATCATGCAAGTTGTGATTAACTTCTTAGGTGGTGCTCTTCAAA
AAGCACTGGGTACTTCTCGTGCGGAATCTCTTTCTGCTACAGCGAATATTTTCGTTGGTCAAACAGAAGCACCTCTAGTT
GTTCGTCCATTCATTCCAAAAATGACTCAATCAGAATTGTTTGCCGTAATGTGTGGTGGTCTAGCTTCTGTTGCTGGTGG
TGTTCTTGCTGGTTATGCGTCTATGGGCGTGCCTCTAGAGTACCTAATCGCGGCGTCATTCATGGCAGCTCCTGGTGGTC
TTCTATTTGCTAAAATTCTTAAACCAGAAACAGAAACACCGGTTGATCAATTTGATGCACTTGATAACAAAGGCGACGAC
AAACCAGCTAACGTAATCGATGCAGCAGCAGCAGGCGCTGCAACAGGTATGCAACTTGCGTTAAACGTAGGTGCAATGCT
TCTTGCATTCATCGGTCTAATCGCTCTAATCAACGGTATCCTAGGTGGTGTTGGTGGTTGGTTCGGTATGCCAGAAATTA
CGCTAGAACTTATTCTTGGTTACGTATTCGCTCCAGTTGCTTTCCTAATCGGTGTGCCGTGGGAAGAAGCGACAGTTGCA
GGTTCGTTCTTAGGTCAAAAATTGGTAGTTAACGAATTCGTTGCTTACTTAAACTTTGCACCTTACCTAAAAGACGTTGC
TGATGGCGGCATGTTAGTTGCACAAACTGGCGTTGAAATGTCTGAGAAAACGAAAGCAATCATTTCATTCGCACTATGTG
GTTTTGCTAACCTTTCTTCTGTAGCTATCCTACTTGGTGGTTTAGGTAGCCTTGCTCCTGAACGTCGTCATGACATCGCT
AAAATGGGCATGAAAGCTGTTGCTGCTGGTACATTATCTAACTTAATGTCAGCAACAATCGCAGGTCTATTCTTATCTAT
CTAA

Upstream 100 bases:

>100_bases
ATATGTGACAGCGGCATTACTTTCTTGGTGGTTCAATGAGTATAATCGCCCCCGCTAATTTGAAACACGCCAACAATCAA
TTTTAGGGAAACTTTTAACT

Downstream 100 bases:

>100_bases
TATTATAGAGACAGAAACGACTGATAAAAACCCGCAACGTGTTGCTAATGCCGATCATTTAAGGTAAATATGATCGGTTG
ACCGATCCTTTTTATATGTC

Product: sodium-dependent nucleoside transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSLLMSLVGIVALLAFAVLISDNRKAINLRTVGGAFAIQFILGAFILYVPVGRDVLLGASEAVANVINYGNTGIEFLFGG
LVSNKMFEVFGGGGFVFALRVLPVIVFFASLTAVLYYLGIMQVVINFLGGALQKALGTSRAESLSATANIFVGQTEAPLV
VRPFIPKMTQSELFAVMCGGLASVAGGVLAGYASMGVPLEYLIAASFMAAPGGLLFAKILKPETETPVDQFDALDNKGDD
KPANVIDAAAAGAATGMQLALNVGAMLLAFIGLIALINGILGGVGGWFGMPEITLELILGYVFAPVAFLIGVPWEEATVA
GSFLGQKLVVNEFVAYLNFAPYLKDVADGGMLVAQTGVEMSEKTKAIISFALCGFANLSSVAILLGGLGSLAPERRHDIA
KMGMKAVAAGTLSNLMSATIAGLFLSI

Sequences:

>Translated_427_residues
MSLLMSLVGIVALLAFAVLISDNRKAINLRTVGGAFAIQFILGAFILYVPVGRDVLLGASEAVANVINYGNTGIEFLFGG
LVSNKMFEVFGGGGFVFALRVLPVIVFFASLTAVLYYLGIMQVVINFLGGALQKALGTSRAESLSATANIFVGQTEAPLV
VRPFIPKMTQSELFAVMCGGLASVAGGVLAGYASMGVPLEYLIAASFMAAPGGLLFAKILKPETETPVDQFDALDNKGDD
KPANVIDAAAAGAATGMQLALNVGAMLLAFIGLIALINGILGGVGGWFGMPEITLELILGYVFAPVAFLIGVPWEEATVA
GSFLGQKLVVNEFVAYLNFAPYLKDVADGGMLVAQTGVEMSEKTKAIISFALCGFANLSSVAILLGGLGSLAPERRHDIA
KMGMKAVAAGTLSNLMSATIAGLFLSI
>Mature_426_residues
SLLMSLVGIVALLAFAVLISDNRKAINLRTVGGAFAIQFILGAFILYVPVGRDVLLGASEAVANVINYGNTGIEFLFGGL
VSNKMFEVFGGGGFVFALRVLPVIVFFASLTAVLYYLGIMQVVINFLGGALQKALGTSRAESLSATANIFVGQTEAPLVV
RPFIPKMTQSELFAVMCGGLASVAGGVLAGYASMGVPLEYLIAASFMAAPGGLLFAKILKPETETPVDQFDALDNKGDDK
PANVIDAAAAGAATGMQLALNVGAMLLAFIGLIALINGILGGVGGWFGMPEITLELILGYVFAPVAFLIGVPWEEATVAG
SFLGQKLVVNEFVAYLNFAPYLKDVADGGMLVAQTGVEMSEKTKAIISFALCGFANLSSVAILLGGLGSLAPERRHDIAK
MGMKAVAAGTLSNLMSATIAGLFLSI

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI11545853, Length=368, Percent_Identity=38.5869565217391, Blast_Score=274, Evalue=1e-73,
Organism=Homo sapiens, GI42542381, Length=426, Percent_Identity=37.0892018779343, Blast_Score=272, Evalue=4e-73,
Organism=Homo sapiens, GI227116277, Length=422, Percent_Identity=36.0189573459716, Blast_Score=261, Evalue=1e-69,
Organism=Escherichia coli, GI1788485, Length=425, Percent_Identity=49.4117647058824, Blast_Score=390, Evalue=1e-110,
Organism=Escherichia coli, GI1788488, Length=425, Percent_Identity=49.8823529411765, Blast_Score=378, Evalue=1e-106,
Organism=Escherichia coli, GI1788737, Length=418, Percent_Identity=29.9043062200957, Blast_Score=176, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI71991794, Length=413, Percent_Identity=30.7506053268765, Blast_Score=197, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI17560276, Length=410, Percent_Identity=29.5121951219512, Blast_Score=191, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI25146537, Length=236, Percent_Identity=29.6610169491525, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI45552517, Length=424, Percent_Identity=36.3207547169811, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI19921868, Length=424, Percent_Identity=36.3207547169811, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI45552519, Length=424, Percent_Identity=36.3207547169811, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI281360430, Length=422, Percent_Identity=35.5450236966825, Blast_Score=246, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 44185; Mature: 44054

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLMSLVGIVALLAFAVLISDNRKAINLRTVGGAFAIQFILGAFILYVPVGRDVLLGAS
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHCCH
EAVANVINYGNTGIEFLFGGLVSNKMFEVFGGGGFVFALRVLPVIVFFASLTAVLYYLGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQVVINFLGGALQKALGTSRAESLSATANIFVGQTEAPLVVRPFIPKMTQSELFAVMCGG
HHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCEEEECCCCCCHHHHHHHHHHHH
LASVAGGVLAGYASMGVPLEYLIAASFMAAPGGLLFAKILKPETETPVDQFDALDNKGDD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCC
KPANVIDAAAAGAATGMQLALNVGAMLLAFIGLIALINGILGGVGGWFGMPEITLELILG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YVFAPVAFLIGVPWEEATVAGSFLGQKLVVNEFVAYLNFAPYLKDVADGGMLVAQTGVEM
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
SEKTKAIISFALCGFANLSSVAILLGGLGSLAPERRHDIAKMGMKAVAAGTLSNLMSATI
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLFLSI
HHHHHCC
>Mature Secondary Structure 
SLLMSLVGIVALLAFAVLISDNRKAINLRTVGGAFAIQFILGAFILYVPVGRDVLLGAS
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHCCH
EAVANVINYGNTGIEFLFGGLVSNKMFEVFGGGGFVFALRVLPVIVFFASLTAVLYYLGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQVVINFLGGALQKALGTSRAESLSATANIFVGQTEAPLVVRPFIPKMTQSELFAVMCGG
HHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCEEEECCCCCCHHHHHHHHHHHH
LASVAGGVLAGYASMGVPLEYLIAASFMAAPGGLLFAKILKPETETPVDQFDALDNKGDD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCC
KPANVIDAAAAGAATGMQLALNVGAMLLAFIGLIALINGILGGVGGWFGMPEITLELILG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YVFAPVAFLIGVPWEEATVAGSFLGQKLVVNEFVAYLNFAPYLKDVADGGMLVAQTGVEM
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
SEKTKAIISFALCGFANLSSVAILLGGLGSLAPERRHDIAKMGMKAVAAGTLSNLMSATI
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLFLSI
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]