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The map label for this gene is recJ [H]

Identifier: 209694157

GI number: 209694157

Start: 617993

End: 619732

Strand: Direct

Name: recJ [H]

Synonym: VSAL_I0564

Alternate gene names: 209694157

Gene position: 617993-619732 (Clockwise)

Preceding gene: 209694156

Following gene: 209694158

Centisome position: 18.59

GC content: 41.15

Gene sequence:

>1740_bases
ATGATTGAAGTGAAACGTCGTATTATTCCTGTTATTCCAAACTTTCCGAGTTCAATTCCTTCAATCTTACAACGGATTTA
TGCGACTCGTGGGATCACATCTAATAATCAGTTAGAACGCGGTGCTAAGCATTTACTGTCATTTCAGTCAATGCATGGTA
TTGAAAAAGCGGTAGATATTTTAGTTGAAGCGATAGCAAAACAAACACGAATTATTGTTGTGGGTGACTTTGATGTTGAT
GGAGCGACGAGCTCTGCACTGTCAGTCATGGCATTTCGAATGATGGGCAGCAATAATGTGGATTACTTAGTCCCTAACCG
TTTCGAAGATGGGTACGGATTAAGTCCTGATGTGGTTGATCAAGCCAAAGCAATGGGGGCTGAGATCATTATGACCGTTG
ATAATGGCGTATCATCTATTGATGGTGTCGCTGCTGCTAAAGCTTATGGTATGCAAGTGGTGGTGACGGATCATCATTTA
CCGGGGTCATCATTACCAATTGCAGATTCGATTGTGAATCCAAACCTTGAAGAGTGTGCCTTTCCTTCTAAATCGTTAGC
TGGCGTAGGGGTTGCTTTTTATTTGATGTTGGCTATCCGTGCGCGTTTACGTGAAAACAACTGGTTTGAAACGCAAAATA
TTCCTATCCCTAACCTTGCTGACTTATTGGATTTAGTCGCTTTAGGTACCGTTGCTGATTTAGTGGCTTTGGATGAAAAT
AACCGTATTTTAGTGCATCAAGGTATTCAACGAATTCGAGCTGGGAAATGCCGTCCAGGAATTCAAGCGTTGATCGAAGT
TGCCAATAAAGTGCCATCTAGGATCAATGCTTCAGACTTTGGTTTTGCGTTAGGCCCTAGAATTAATGCGGCAGGGCGTT
TGGATGATATGTCATTTGGCGTAGAACTTTTGATGTCCAACAACATTCATGCTGCTCGTCGTATGGCGTCAGAATTAGAT
GCTTTGAATCAAACTCGTAAAGAAATAGAACAAGGCATGAAAGAAGAAGCGATGGCAATCTGTGAGCGCTTAGAGTTTGG
CGCACAAAGTGAATTGCCATTTGGTTTAGTTTTATTTCAACGAGATTGGCACCAAGGTGTGATTGGTATTTTAGCATCTC
GTCTCAAAGAGAAATACCATCGTCCAGTGATTGCTTTTGCTGATGGTGGTGATGGGTTAATTAAAGGATCATGCCGTTCA
ATCTCGGGTTTTCATATGCGTGATGCGTTGGATTTAATTGATACCCGAAACCCCGGTTTAATCTTAAAATTTGGTGGTCA
TGCGATGGCTGCGGGATTAAGTATTAAAGAAGTCGATTACAAGCGTTTCTCCCAAGCGTTTGATGACGTGGTCCGTGAAT
CAGTAGAAGAAGAAGCGTTAACTGGGGTGGTATTATCTGATGGCGAATTAATGCCAGAAGAATTTACGTTAGGTACCGCT
GAGATCCTTCGTGCTGGTGGTCCTTGGGGACAAGCTTTCCCTGAACCTATTTTTGATGGTGAATTTAAAGTACTTAATCA
ACGTTTAGTCGGTGAAAAGCACTTAAAATTAATGTTAGAACCAATACATAAAGATTTTCCAACCAACAAAATGATCGATG
CCATTGCCTTTAATATTGACGTACGTCGTTGGCCAGATGCTTCAGTACAAAAAGTGAAGTTAGCTTACCGTTTAGACATT
AATGAATTCAGAGGCAATCAGACATTACAGTTAATGGTTGACTATATAGAACCAATATAG

Upstream 100 bases:

>100_bases
CTTGCCGATTTAGAAAAATAATTTCTCTTTCTTTAATCGAAATCCCCGTCTTGTTACGGGGATTTTTTGTATTTAATAAA
CGTAATGTTAGGCCAATATC

Downstream 100 bases:

>100_bases
AGTCTTGATTTAGGGACTAAAGTTAATTTTAACTAAACCTTGCCTTAATAAATACTTAATGACTTGTTGCATTTATAGCC
TGTATGAAAATGGAAAGGCT

Product: ssDNA exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MIEVKRRIIPVIPNFPSSIPSILQRIYATRGITSNNQLERGAKHLLSFQSMHGIEKAVDILVEAIAKQTRIIVVGDFDVD
GATSSALSVMAFRMMGSNNVDYLVPNRFEDGYGLSPDVVDQAKAMGAEIIMTVDNGVSSIDGVAAAKAYGMQVVVTDHHL
PGSSLPIADSIVNPNLEECAFPSKSLAGVGVAFYLMLAIRARLRENNWFETQNIPIPNLADLLDLVALGTVADLVALDEN
NRILVHQGIQRIRAGKCRPGIQALIEVANKVPSRINASDFGFALGPRINAAGRLDDMSFGVELLMSNNIHAARRMASELD
ALNQTRKEIEQGMKEEAMAICERLEFGAQSELPFGLVLFQRDWHQGVIGILASRLKEKYHRPVIAFADGGDGLIKGSCRS
ISGFHMRDALDLIDTRNPGLILKFGGHAMAAGLSIKEVDYKRFSQAFDDVVRESVEEEALTGVVLSDGELMPEEFTLGTA
EILRAGGPWGQAFPEPIFDGEFKVLNQRLVGEKHLKLMLEPIHKDFPTNKMIDAIAFNIDVRRWPDASVQKVKLAYRLDI
NEFRGNQTLQLMVDYIEPI

Sequences:

>Translated_579_residues
MIEVKRRIIPVIPNFPSSIPSILQRIYATRGITSNNQLERGAKHLLSFQSMHGIEKAVDILVEAIAKQTRIIVVGDFDVD
GATSSALSVMAFRMMGSNNVDYLVPNRFEDGYGLSPDVVDQAKAMGAEIIMTVDNGVSSIDGVAAAKAYGMQVVVTDHHL
PGSSLPIADSIVNPNLEECAFPSKSLAGVGVAFYLMLAIRARLRENNWFETQNIPIPNLADLLDLVALGTVADLVALDEN
NRILVHQGIQRIRAGKCRPGIQALIEVANKVPSRINASDFGFALGPRINAAGRLDDMSFGVELLMSNNIHAARRMASELD
ALNQTRKEIEQGMKEEAMAICERLEFGAQSELPFGLVLFQRDWHQGVIGILASRLKEKYHRPVIAFADGGDGLIKGSCRS
ISGFHMRDALDLIDTRNPGLILKFGGHAMAAGLSIKEVDYKRFSQAFDDVVRESVEEEALTGVVLSDGELMPEEFTLGTA
EILRAGGPWGQAFPEPIFDGEFKVLNQRLVGEKHLKLMLEPIHKDFPTNKMIDAIAFNIDVRRWPDASVQKVKLAYRLDI
NEFRGNQTLQLMVDYIEPI
>Mature_579_residues
MIEVKRRIIPVIPNFPSSIPSILQRIYATRGITSNNQLERGAKHLLSFQSMHGIEKAVDILVEAIAKQTRIIVVGDFDVD
GATSSALSVMAFRMMGSNNVDYLVPNRFEDGYGLSPDVVDQAKAMGAEIIMTVDNGVSSIDGVAAAKAYGMQVVVTDHHL
PGSSLPIADSIVNPNLEECAFPSKSLAGVGVAFYLMLAIRARLRENNWFETQNIPIPNLADLLDLVALGTVADLVALDEN
NRILVHQGIQRIRAGKCRPGIQALIEVANKVPSRINASDFGFALGPRINAAGRLDDMSFGVELLMSNNIHAARRMASELD
ALNQTRKEIEQGMKEEAMAICERLEFGAQSELPFGLVLFQRDWHQGVIGILASRLKEKYHRPVIAFADGGDGLIKGSCRS
ISGFHMRDALDLIDTRNPGLILKFGGHAMAAGLSIKEVDYKRFSQAFDDVVRESVEEEALTGVVLSDGELMPEEFTLGTA
EILRAGGPWGQAFPEPIFDGEFKVLNQRLVGEKHLKLMLEPIHKDFPTNKMIDAIAFNIDVRRWPDASVQKVKLAYRLDI
NEFRGNQTLQLMVDYIEPI

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=578, Percent_Identity=61.5916955017301, Blast_Score=746, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63727; Mature: 63727

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVKRRIIPVIPNFPSSIPSILQRIYATRGITSNNQLERGAKHLLSFQSMHGIEKAVDI
CCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVEAIAKQTRIIVVGDFDVDGATSSALSVMAFRMMGSNNVDYLVPNRFEDGYGLSPDVVD
HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHH
QAKAMGAEIIMTVDNGVSSIDGVAAAKAYGMQVVVTDHHLPGSSLPIADSIVNPNLEECA
HHHHCCCEEEEEECCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHCCCCHHHHC
FPSKSLAGVGVAFYLMLAIRARLRENNWFETQNIPIPNLADLLDLVALGTVADLVALDEN
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVHQGIQRIRAGKCRPGIQALIEVANKVPSRINASDFGFALGPRINAAGRLDDMSFG
CEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHC
VELLMSNNIHAARRMASELDALNQTRKEIEQGMKEEAMAICERLEFGAQSELPFGLVLFQ
HHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
RDWHQGVIGILASRLKEKYHRPVIAFADGGDGLIKGSCRSISGFHMRDALDLIDTRNPGL
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCE
ILKFGGHAMAAGLSIKEVDYKRFSQAFDDVVRESVEEEALTGVVLSDGELMPEEFTLGTA
EEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHCCCHH
EILRAGGPWGQAFPEPIFDGEFKVLNQRLVGEKHLKLMLEPIHKDFPTNKMIDAIAFNID
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHEEEE
VRRWPDASVQKVKLAYRLDINEFRGNQTLQLMVDYIEPI
EECCCCCCHHHEEEEEEECHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIEVKRRIIPVIPNFPSSIPSILQRIYATRGITSNNQLERGAKHLLSFQSMHGIEKAVDI
CCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVEAIAKQTRIIVVGDFDVDGATSSALSVMAFRMMGSNNVDYLVPNRFEDGYGLSPDVVD
HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHH
QAKAMGAEIIMTVDNGVSSIDGVAAAKAYGMQVVVTDHHLPGSSLPIADSIVNPNLEECA
HHHHCCCEEEEEECCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHCCCCHHHHC
FPSKSLAGVGVAFYLMLAIRARLRENNWFETQNIPIPNLADLLDLVALGTVADLVALDEN
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVHQGIQRIRAGKCRPGIQALIEVANKVPSRINASDFGFALGPRINAAGRLDDMSFG
CEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHC
VELLMSNNIHAARRMASELDALNQTRKEIEQGMKEEAMAICERLEFGAQSELPFGLVLFQ
HHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
RDWHQGVIGILASRLKEKYHRPVIAFADGGDGLIKGSCRSISGFHMRDALDLIDTRNPGL
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCE
ILKFGGHAMAAGLSIKEVDYKRFSQAFDDVVRESVEEEALTGVVLSDGELMPEEFTLGTA
EEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHCCCHH
EILRAGGPWGQAFPEPIFDGEFKVLNQRLVGEKHLKLMLEPIHKDFPTNKMIDAIAFNID
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHEEEE
VRRWPDASVQKVKLAYRLDINEFRGNQTLQLMVDYIEPI
EECCCCCCHHHEEEEEEECHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]