| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is fbaA [H]
Identifier: 209694150
GI number: 209694150
Start: 610409
End: 611485
Strand: Direct
Name: fbaA [H]
Synonym: VSAL_I0557
Alternate gene names: 209694150
Gene position: 610409-611485 (Clockwise)
Preceding gene: 209694149
Following gene: 209694153
Centisome position: 18.36
GC content: 43.73
Gene sequence:
>1077_bases ATGTCTAAGATCTTCGATTTTGTAAAACCTGGTGTTATTTCTGGCGACGACGTACAGAAAGTATTTGCAGTAGCAAAAGA AAACAAATTTGCTCTTCCTGCGGTAAACGTAGTGAATACTGATACTATCAATGCGGTTCTTGAAGCTGCTTCTAAAGCTA AAGCACCAGTTGTTGTTCAGTTCTCTAATGGCGGTGCTGGTTTCTTCGCTGGTAAAGGCGTTAAACTTGAAGGTCAAGGT GCACAAATCCTTGGCGCTGTAGCGGGTGCAAAATACGTTCACGCAGTTGCTGAATCTTACGGTGTTCCAGTTATTCTTCA TACTGACCATGCTGCTAAGAAACTTCTTCCATGGATCGACGGACTACTAGACGCTGGTGAAGTATTCTTCGCTGAAACTG GTAAGCCTTTATTCTCTTCACACATGCTAGACCTTTCTGAAGAGTCTCTAGAAGAGAACATCGAAACTTGTGCTAAGTAC CTAGAGCGCATGGCTAAAATGAACATGACAATCGAGATTGAACTTGGTTGTACTGGTGGCGAAGAAGACGGCGTTGATAA CTCTGATATGGACGCATCTGAGCTTTACACTTCTCCTGAAGATGTTGCATACGCATACGAAAAACTAACGGCTATCAGCC CACGTTTCACTATCGCTGCATCTTTCGGTAACGTACACGGTGTTTACCAAGCAGGTAATGTTGTTCTTACTCCAACTATC CTACGTGATTCTCAAGCTTACTGTGCTGAGAAATTTGGTATTGCATCTGATGCACTTAACTTCGTATTCCACGGTGGTTC TGGTTCTTCTGAAGCAGAAATCCAAGAATCTATCGGTTACGGCGTTATCAAAATGAACATCGATACTGATACTCAGTGGG CTTCATGGGATGGCGTTCGTGCATACGAAGCTGAAAACCGTGATTTCCTACAAGGTCAAATCGGTAACCCAACTGGCGAA TCTGCGCCTAACAAGAAGTACTACGATCCACGCGTTTGGTTACGTGCAGGTCAAGCTTCTATGGTTACGCGTCTTGAAAA AGCATTTGCTGACCTTAACGCAATCGACGTACTATAA
Upstream 100 bases:
>100_bases TGTTTATTGATACAATAGAAAAAGTTGTGAGCAAACGTTTGCAAAAATTTGAACGTAAGTTTTTTAATTTTAAAACGATA GAATAAATAGGACTACTTCC
Downstream 100 bases:
>100_bases TTTTTATTATAGACCGCTCGAATTGAGTTAATAAAAACCCGCTGATTAGCGGGTTTTTTTATGTTTGTAAAAAGGGACTA GAGGCGAGGATTTAGGGACG
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; Fructose-bisphosphate aldolase class II [H]
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSKIFDFVKPGVISGDDVQKVFAVAKENKFALPAVNVVNTDTINAVLEAASKAKAPVVVQFSNGGAGFFAGKGVKLEGQG AQILGAVAGAKYVHAVAESYGVPVILHTDHAAKKLLPWIDGLLDAGEVFFAETGKPLFSSHMLDLSEESLEENIETCAKY LERMAKMNMTIEIELGCTGGEEDGVDNSDMDASELYTSPEDVAYAYEKLTAISPRFTIAASFGNVHGVYQAGNVVLTPTI LRDSQAYCAEKFGIASDALNFVFHGGSGSSEAEIQESIGYGVIKMNIDTDTQWASWDGVRAYEAENRDFLQGQIGNPTGE SAPNKKYYDPRVWLRAGQASMVTRLEKAFADLNAIDVL
Sequences:
>Translated_358_residues MSKIFDFVKPGVISGDDVQKVFAVAKENKFALPAVNVVNTDTINAVLEAASKAKAPVVVQFSNGGAGFFAGKGVKLEGQG AQILGAVAGAKYVHAVAESYGVPVILHTDHAAKKLLPWIDGLLDAGEVFFAETGKPLFSSHMLDLSEESLEENIETCAKY LERMAKMNMTIEIELGCTGGEEDGVDNSDMDASELYTSPEDVAYAYEKLTAISPRFTIAASFGNVHGVYQAGNVVLTPTI LRDSQAYCAEKFGIASDALNFVFHGGSGSSEAEIQESIGYGVIKMNIDTDTQWASWDGVRAYEAENRDFLQGQIGNPTGE SAPNKKYYDPRVWLRAGQASMVTRLEKAFADLNAIDVL >Mature_357_residues SKIFDFVKPGVISGDDVQKVFAVAKENKFALPAVNVVNTDTINAVLEAASKAKAPVVVQFSNGGAGFFAGKGVKLEGQGA QILGAVAGAKYVHAVAESYGVPVILHTDHAAKKLLPWIDGLLDAGEVFFAETGKPLFSSHMLDLSEESLEENIETCAKYL ERMAKMNMTIEIELGCTGGEEDGVDNSDMDASELYTSPEDVAYAYEKLTAISPRFTIAASFGNVHGVYQAGNVVLTPTIL RDSQAYCAEKFGIASDALNFVFHGGSGSSEAEIQESIGYGVIKMNIDTDTQWASWDGVRAYEAENRDFLQGQIGNPTGES APNKKYYDPRVWLRAGQASMVTRLEKAFADLNAIDVL
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789293, Length=359, Percent_Identity=76.6016713091922, Blast_Score=582, Evalue=1e-167, Organism=Escherichia coli, GI87082041, Length=327, Percent_Identity=26.2996941896024, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1789526, Length=317, Percent_Identity=28.0757097791798, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788072, Length=296, Percent_Identity=26.3513513513513, Blast_Score=75, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6322790, Length=351, Percent_Identity=51.8518518518518, Blast_Score=390, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006411 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38448; Mature: 38316
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIFDFVKPGVISGDDVQKVFAVAKENKFALPAVNVVNTDTINAVLEAASKAKAPVVVQ CCCHHHHHCCCCCCCHHHHHHHHHHCCCCEECCEEEEECCHHHHHHHHHHHHCCCCEEEE FSNGGAGFFAGKGVKLEGQGAQILGAVAGAKYVHAVAESYGVPVILHTDHAAKKLLPWID ECCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHH GLLDAGEVFFAETGKPLFSSHMLDLSEESLEENIETCAKYLERMAKMNMTIEIELGCTGG HHHCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC EEDGVDNSDMDASELYTSPEDVAYAYEKLTAISPRFTIAASFGNVHGVYQAGNVVLTPTI CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCEEEEEHE LRDSQAYCAEKFGIASDALNFVFHGGSGSSEAEIQESIGYGVIKMNIDTDTQWASWDGVR ECCCHHHHHHHCCCHHHCEEEEEECCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCEE AYEAENRDFLQGQIGNPTGESAPNKKYYDPRVWLRAGQASMVTRLEKAFADLNAIDVL EECCCCCCEEECCCCCCCCCCCCCCCCCCCHHEEECCCHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure SKIFDFVKPGVISGDDVQKVFAVAKENKFALPAVNVVNTDTINAVLEAASKAKAPVVVQ CCHHHHHCCCCCCCHHHHHHHHHHCCCCEECCEEEEECCHHHHHHHHHHHHCCCCEEEE FSNGGAGFFAGKGVKLEGQGAQILGAVAGAKYVHAVAESYGVPVILHTDHAAKKLLPWID ECCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHH GLLDAGEVFFAETGKPLFSSHMLDLSEESLEENIETCAKYLERMAKMNMTIEIELGCTGG HHHCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC EEDGVDNSDMDASELYTSPEDVAYAYEKLTAISPRFTIAASFGNVHGVYQAGNVVLTPTI CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCEEEEEHE LRDSQAYCAEKFGIASDALNFVFHGGSGSSEAEIQESIGYGVIKMNIDTDTQWASWDGVR ECCCHHHHHHHCCCHHHCEEEEEECCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCEE AYEAENRDFLQGQIGNPTGESAPNKKYYDPRVWLRAGQASMVTRLEKAFADLNAIDVL EECCCCCCEEECCCCCCCCCCCCCCCCCCCHHEEECCCHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]