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The map label for this gene is yqgE [C]

Identifier: 209694140

GI number: 209694140

Start: 600405

End: 600968

Strand: Reverse

Name: yqgE [C]

Synonym: VSAL_I0547

Alternate gene names: 209694140

Gene position: 600968-600405 (Counterclockwise)

Preceding gene: 209694141

Following gene: 209694139

Centisome position: 18.07

GC content: 40.43

Gene sequence:

>564_bases
ATGGATTTAAAAAACCATTTTCTGGTTGCTATGCCAAGTATGAATGATCCCGTTTTTACACGGAGTGTGATCTATATTTG
TGAGCACGATTCCGATGGTACAATGGGGTTACGCATAAACCAACCAGTGCAAATTTCACTGAAAGGCATGCTTGACCAAA
TCAAACTGGATAATCCTTCCCCTATTATCTTCCCTCAAACGCTATCTCAACCGGTACTAAATGGCGGTCCAGTCTCTGAT
GATCGTGGATTTGTTCTTCATTATCCAAAAGACAATTACAGTTCTAGTATTGAAGTCACCGAAGAACTTTCTGTAACGAC
GTCTAAAGATATTTTGGCAACCTTAGGTACCGAAGATCAACCTTATAAATATTTAGTCGCTCTTGGCTATTCTGGCTGGG
ATGCAGGGCAACTAGAGCAAGAATTATCTGAAAACACATGGCTAATCTTAGAAGCAGATTCTTCTGTTATTTTTGATACT
CCTATTCCTGATCGTTGGCGCAGAGCTATCGAAATACTAGGCATTAGTCCAGTAAATATATCCAGCGAGGTTGGACACGC
ATGA

Upstream 100 bases:

>100_bases
CGTCGCATTAATGAGAAGTCAGCTTAAGTAAAATCACCTAAGCTAAAGATAAGCAGTGGGAAATCCCCCACTGTTTTATC
ATACGATTTTAGGAGGCATT

Downstream 100 bases:

>100_bases
GTTCACGCACCATCATGGCATTTGATTTTGGCACAAAAAGCATTGGCTCAGCCATTGGGCAAGAAATCACAGGTACCGCA
AGTCCATTAAAAGCGTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MDLKNHFLVAMPSMNDPVFTRSVIYICEHDSDGTMGLRINQPVQISLKGMLDQIKLDNPSPIIFPQTLSQPVLNGGPVSD
DRGFVLHYPKDNYSSSIEVTEELSVTTSKDILATLGTEDQPYKYLVALGYSGWDAGQLEQELSENTWLILEADSSVIFDT
PIPDRWRRAIEILGISPVNISSEVGHA

Sequences:

>Translated_187_residues
MDLKNHFLVAMPSMNDPVFTRSVIYICEHDSDGTMGLRINQPVQISLKGMLDQIKLDNPSPIIFPQTLSQPVLNGGPVSD
DRGFVLHYPKDNYSSSIEVTEELSVTTSKDILATLGTEDQPYKYLVALGYSGWDAGQLEQELSENTWLILEADSSVIFDT
PIPDRWRRAIEILGISPVNISSEVGHA
>Mature_187_residues
MDLKNHFLVAMPSMNDPVFTRSVIYICEHDSDGTMGLRINQPVQISLKGMLDQIKLDNPSPIIFPQTLSQPVLNGGPVSD
DRGFVLHYPKDNYSSSIEVTEELSVTTSKDILATLGTEDQPYKYLVALGYSGWDAGQLEQELSENTWLILEADSSVIFDT
PIPDRWRRAIEILGISPVNISSEVGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=188, Percent_Identity=46.8085106382979, Blast_Score=203, Evalue=5e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y547_ALISL (B6EMV3)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002262068.1
- ProteinModelPortal:   B6EMV3
- GeneID:   6989438
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I0547
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- ProtClustDB:   PRK00228
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 20750; Mature: 20750

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKNHFLVAMPSMNDPVFTRSVIYICEHDSDGTMGLRINQPVQISLKGMLDQIKLDNPS
CCCCCCEEEEECCCCCCCEEEEEEEEEEECCCCEEEEEECCCEEEEEECCEEEEECCCCC
PIIFPQTLSQPVLNGGPVSDDRGFVLHYPKDNYSSSIEVTEELSVTTSKDILATLGTEDQ
CEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCEEEECCCCCC
PYKYLVALGYSGWDAGQLEQELSENTWLILEADSSVIFDTPIPDRWRRAIEILGISPVNI
CEEEEEEEECCCCCHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHHHEEEECCCCCCC
SSEVGHA
CCCCCCC
>Mature Secondary Structure
MDLKNHFLVAMPSMNDPVFTRSVIYICEHDSDGTMGLRINQPVQISLKGMLDQIKLDNPS
CCCCCCEEEEECCCCCCCEEEEEEEEEEECCCCEEEEEECCCEEEEEECCEEEEECCCCC
PIIFPQTLSQPVLNGGPVSDDRGFVLHYPKDNYSSSIEVTEELSVTTSKDILATLGTEDQ
CEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCEEEECCCCCC
PYKYLVALGYSGWDAGQLEQELSENTWLILEADSSVIFDTPIPDRWRRAIEILGISPVNI
CEEEEEEEECCCCCHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHHHEEEECCCCCCC
SSEVGHA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA