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The map label for this gene is yggU [C]

Identifier: 209694133

GI number: 209694133

Start: 595227

End: 595478

Strand: Reverse

Name: yggU [C]

Synonym: VSAL_I0540

Alternate gene names: 209694133

Gene position: 595478-595227 (Counterclockwise)

Preceding gene: 209694134

Following gene: 209694132

Centisome position: 17.91

GC content: 39.29

Gene sequence:

>252_bases
ATGCCAATTAAATACGATAACGATGATTTGGTCTTAAGACTTTACCTTCAACCGAAGGCCAGTCGAGACCAAATCGTTGG
TATACATGGAGAGGAACTCAAAGTAGCGATTACCGCTCCTCCTGTTGATGGGAAAGCTAACGCACATTTGATTAAGTACT
TCTCGAAATTATTTAAGGTTGCTAAAGGTAAAATCACAGTAGAAAAAGGAGAACTTAATCGTCACAAACAAGGTTCGAAT
TCACTCTCCTGA

Upstream 100 bases:

>100_bases
CTGTTCATTGTGCTTCAATTTGCTAACTTCTTAATGGGTGATTTACTTGGCCCGATTTGGTATAGCTTGTAATCTGATCT
ATATTGGAATCTAAGCAATA

Downstream 100 bases:

>100_bases
AATTATTCCTGATGCCATTCAAATACTGCTAGAGCCGAGTTAATTCTCGGCTTTTCTTTATGGAGATTAACATGAAAAAA
ACGCTGTTACTTTTATCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MPIKYDNDDLVLRLYLQPKASRDQIVGIHGEELKVAITAPPVDGKANAHLIKYFSKLFKVAKGKITVEKGELNRHKQGSN
SLS

Sequences:

>Translated_83_residues
MPIKYDNDDLVLRLYLQPKASRDQIVGIHGEELKVAITAPPVDGKANAHLIKYFSKLFKVAKGKITVEKGELNRHKQGSN
SLS
>Mature_82_residues
PIKYDNDDLVLRLYLQPKASRDQIVGIHGEELKVAITAPPVDGKANAHLIKYFSKLFKVAKGKITVEKGELNRHKQGSNS
LS

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

Organism=Escherichia coli, GI87082189, Length=75, Percent_Identity=66.6666666666667, Blast_Score=114, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 9243; Mature: 9112

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIKYDNDDLVLRLYLQPKASRDQIVGIHGEELKVAITAPPVDGKANAHLIKYFSKLFKV
CCCEECCCCEEEEEEECCCCCCCCEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
AKGKITVEKGELNRHKQGSNSLS
HCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIKYDNDDLVLRLYLQPKASRDQIVGIHGEELKVAITAPPVDGKANAHLIKYFSKLFKV
CCEECCCCEEEEEEECCCCCCCCEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
AKGKITVEKGELNRHKQGSNSLS
HCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA