Click here to switch to the map view.

The map label for this gene is wza [H]

Identifier: 209694056

GI number: 209694056

Start: 514317

End: 514898

Strand: Reverse

Name: wza [H]

Synonym: VSAL_I0458

Alternate gene names: 209694056

Gene position: 514898-514317 (Counterclockwise)

Preceding gene: 209694057

Following gene: 209694055

Centisome position: 15.48

GC content: 40.21

Gene sequence:

>582_bases
ATGAAATCCTTCTTTATATCTTTTTGCTTATTCATCTCTGTGCTCTCTCACGCTTATGCATCAGAGACTTCACCAGTAAA
GAATACAGAAATACAAAAATCAGACACCACGATTCAGAAAGATGATCTAGGTTATGTATTAGGGGCTGGTGATAGTATTC
AGATATCGGTATTTAAAGAGCCCGATATGACCTTACGTTTGAAAATTCACCGCGGTGGATTTGTTAATTTCCCTTACCTT
GGTGATGTGCAGTTATTGGGAAGAACTCCAGCACAAATAGAAAAAGACATAGAAACTAAATTGGCTGACGGGTACATCGT
CCAGCCAATGGTAACCGTCAGTATTGAGTCCTTTAGAAAGTTCTTTATCAGTGGTGAAGTTGCAAACCCTAATGGGTACG
AATTTCAACCAGGATTAACCGTTGAACAAGCGATTGCGATGGCTGGTGGTTTTACTGATCGGTCAGATAGAGATGGCATT
AACGTCCGTCTAGCCGCTACAAATGAATTAATTGAAGATGTGGGTCCAACCTATCCAGTAGGTCCGGGCGATGTAGTTAT
TATTGAACAGAGTTTTTTCTAA

Upstream 100 bases:

>100_bases
GTTTGATGATTTCACTATCAATAACTCGGCAGAAACCATTATCCAGACATTAGGTTATGACAAATCCATTATTATGTTTA
CAACTAAGGTGCAAATTTAG

Downstream 100 bases:

>100_bases
ATTATGGCACTATCAATTATAGAAAATGGAAAAAAGCTAGAAAGTACAATCGATTTTTCTAATTTCCTAAAAGAATTTAA
AAAATATCGTCTACGAATTC

Product: polysaccharide biosynthesis/export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKSFFISFCLFISVLSHAYASETSPVKNTEIQKSDTTIQKDDLGYVLGAGDSIQISVFKEPDMTLRLKIHRGGFVNFPYL
GDVQLLGRTPAQIEKDIETKLADGYIVQPMVTVSIESFRKFFISGEVANPNGYEFQPGLTVEQAIAMAGGFTDRSDRDGI
NVRLAATNELIEDVGPTYPVGPGDVVIIEQSFF

Sequences:

>Translated_193_residues
MKSFFISFCLFISVLSHAYASETSPVKNTEIQKSDTTIQKDDLGYVLGAGDSIQISVFKEPDMTLRLKIHRGGFVNFPYL
GDVQLLGRTPAQIEKDIETKLADGYIVQPMVTVSIESFRKFFISGEVANPNGYEFQPGLTVEQAIAMAGGFTDRSDRDGI
NVRLAATNELIEDVGPTYPVGPGDVVIIEQSFF
>Mature_193_residues
MKSFFISFCLFISVLSHAYASETSPVKNTEIQKSDTTIQKDDLGYVLGAGDSIQISVFKEPDMTLRLKIHRGGFVNFPYL
GDVQLLGRTPAQIEKDIETKLADGYIVQPMVTVSIESFRKFFISGEVANPNGYEFQPGLTVEQAIAMAGGFTDRSDRDGI
NVRLAATNELIEDVGPTYPVGPGDVVIIEQSFF

Specific function: Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1788376, Length=170, Percent_Identity=31.1764705882353, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 21226; Mature: 21226

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFFISFCLFISVLSHAYASETSPVKNTEIQKSDTTIQKDDLGYVLGAGDSIQISVFKE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEEEEC
PDMTLRLKIHRGGFVNFPYLGDVQLLGRTPAQIEKDIETKLADGYIVQPMVTVSIESFRK
CCEEEEEEEECCCEECCCCCCCEEEECCCHHHHHHHHHHHHCCCEEECCEEEEEHHHHHH
FFISGEVANPNGYEFQPGLTVEQAIAMAGGFTDRSDRDGINVRLAATNELIEDVGPTYPV
HHCCCEECCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCC
GPGDVVIIEQSFF
CCCCEEEEEECCC
>Mature Secondary Structure
MKSFFISFCLFISVLSHAYASETSPVKNTEIQKSDTTIQKDDLGYVLGAGDSIQISVFKE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEEEEC
PDMTLRLKIHRGGFVNFPYLGDVQLLGRTPAQIEKDIETKLADGYIVQPMVTVSIESFRK
CCEEEEEEEECCCEECCCCCCCEEEECCCHHHHHHHHHHHHCCCEEECCEEEEEHHHHHH
FFISGEVANPNGYEFQPGLTVEQAIAMAGGFTDRSDRDGINVRLAATNELIEDVGPTYPV
HHCCCEECCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCC
GPGDVVIIEQSFF
CCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]