The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694052

Identifier: 209694052

GI number: 209694052

Start: 508412

End: 509794

Strand: Reverse

Name: 209694052

Synonym: VSAL_I0453

Alternate gene names: NA

Gene position: 509794-508412 (Counterclockwise)

Preceding gene: 209694053

Following gene: 209694051

Centisome position: 15.33

GC content: 36.23

Gene sequence:

>1383_bases
ATGATGCCGTTAAATACTGGTTTTTTCCTACAAATCTATGCCGTTATCAGTCTCGTATTATGTGGCTTAACACAATATTT
CACTGGTATTTCTGCCATTTTATGGCTGCCATTTTTATTAGCTTTTACGATGACAGGCTTACTCTTTTTACAGAATCGAT
ATACGCCGCTCGATCTCGATCATAAAGAAATTATTATACTCGTTTTGTTCATTGGTTTTTTCGTTCAAGCGGTACTCAGT
ACCTTTTTGCAAAATGGTATCACCACCACTATTGTTGGCTTAAAAAATGAGCTCGCACTCTCCTTAATTCTATTTTGTCT
ATTGTTGCGATTTTGTCGGGAATCACAAATATACCGAGTGACAAAAACACTTTATTGGATTTTTTATGCTCAATTCCCCG
TCATTCTATTCCAAATTTTTGTCATTCTTCCCAAACGAGTAGCCGCTCACGGTGAGTATGAAAAATGGGATTCGGTCGTA
GGTACTTTTGGGGGCGATCCCATGGGAGGTGGGAATACGGCTGCGATGGGGCTTTTTTGCTTACTGATTATGCTGTTAAA
ACTCTCTGAGTATAAACATGGTCTATGCTCAATAAAATCAACTATCCTACACATTGGTGCGGCATTCACTCTATGTATTT
TAGGTGAAGTGAAATTTGTTATTTTATTATCACCCATTTTACTGGCTTATGTATGGCTAGCTCCTAGCTACATAAAAGGC
ATGAAAAGCTACGATATTAAGATTATTCTCGCGATTATTGGTGGGATGTTGCTATTAATGAGTATCGCTATCTTATTATT
ATCATTATCTTATTCATCTGCTTTTGGCAGTGACCCAAGTAAAGGGCCATTAGACATTTTCATTGGTTCTTTAGAATATA
TATTTGATCCTAACTATATTATGCCGACCGGTGAATTAGGAAGAATGACAACCATTTTTTTCTGGTTAGATAATAATGAC
TTTTATGGGCTTCCAAATGCTTTATTTGGTTATGGATTAAATACAACAAATCACGGAAGTTCGGTTTCCCCTGGTTTTTT
AAATGTTCTTTTTAATGTCATTCTTGATACGACAGCACTCAGTGTTCTTTTATGGGAATTGGGGATCATTGGAACATTAT
TTTTCATTTCAATGACACTCTATATTCTTCGAGTCTGTAAACCTACTCCTCTATTTAATCGAGATGACGTGACACAAGAA
GATATTAGATTAATGAGCTATCCTCCTGCATTTAATGCCTTTGCTATTGCTTGTTTATTAAGTCTCCCATACAGCCAAAT
ATTGATGTTGGTCCCTATGCTTCAATTTATTTTTTACTTATCACTAGGATCAAACTTAGTGATCCGAAAATCCTTAATTA
CGGCGGCAGCGAATCATGACTAG

Upstream 100 bases:

>100_bases
ATTCTGTTCTTTTGTTTTCGATTCTGTCATTTGTTCGTTACAGCTTTATCTATTTAAAAGTAAATAAACGAGCACACCTA
TTAGCTCAGGAAAATAAGTA

Downstream 100 bases:

>100_bases
TTCTCCTTTTATTTCAGTCATTATCAAAACCTATAATGAAGAATCTGGCATCGCGAATACGATAACAAGCATCCAAGAGC
ACATGAGTAAATATCCCCAT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MMPLNTGFFLQIYAVISLVLCGLTQYFTGISAILWLPFLLAFTMTGLLFLQNRYTPLDLDHKEIIILVLFIGFFVQAVLS
TFLQNGITTTIVGLKNELALSLILFCLLLRFCRESQIYRVTKTLYWIFYAQFPVILFQIFVILPKRVAAHGEYEKWDSVV
GTFGGDPMGGGNTAAMGLFCLLIMLLKLSEYKHGLCSIKSTILHIGAAFTLCILGEVKFVILLSPILLAYVWLAPSYIKG
MKSYDIKIILAIIGGMLLLMSIAILLLSLSYSSAFGSDPSKGPLDIFIGSLEYIFDPNYIMPTGELGRMTTIFFWLDNND
FYGLPNALFGYGLNTTNHGSSVSPGFLNVLFNVILDTTALSVLLWELGIIGTLFFISMTLYILRVCKPTPLFNRDDVTQE
DIRLMSYPPAFNAFAIACLLSLPYSQILMLVPMLQFIFYLSLGSNLVIRKSLITAAANHD

Sequences:

>Translated_460_residues
MMPLNTGFFLQIYAVISLVLCGLTQYFTGISAILWLPFLLAFTMTGLLFLQNRYTPLDLDHKEIIILVLFIGFFVQAVLS
TFLQNGITTTIVGLKNELALSLILFCLLLRFCRESQIYRVTKTLYWIFYAQFPVILFQIFVILPKRVAAHGEYEKWDSVV
GTFGGDPMGGGNTAAMGLFCLLIMLLKLSEYKHGLCSIKSTILHIGAAFTLCILGEVKFVILLSPILLAYVWLAPSYIKG
MKSYDIKIILAIIGGMLLLMSIAILLLSLSYSSAFGSDPSKGPLDIFIGSLEYIFDPNYIMPTGELGRMTTIFFWLDNND
FYGLPNALFGYGLNTTNHGSSVSPGFLNVLFNVILDTTALSVLLWELGIIGTLFFISMTLYILRVCKPTPLFNRDDVTQE
DIRLMSYPPAFNAFAIACLLSLPYSQILMLVPMLQFIFYLSLGSNLVIRKSLITAAANHD
>Mature_460_residues
MMPLNTGFFLQIYAVISLVLCGLTQYFTGISAILWLPFLLAFTMTGLLFLQNRYTPLDLDHKEIIILVLFIGFFVQAVLS
TFLQNGITTTIVGLKNELALSLILFCLLLRFCRESQIYRVTKTLYWIFYAQFPVILFQIFVILPKRVAAHGEYEKWDSVV
GTFGGDPMGGGNTAAMGLFCLLIMLLKLSEYKHGLCSIKSTILHIGAAFTLCILGEVKFVILLSPILLAYVWLAPSYIKG
MKSYDIKIILAIIGGMLLLMSIAILLLSLSYSSAFGSDPSKGPLDIFIGSLEYIFDPNYIMPTGELGRMTTIFFWLDNND
FYGLPNALFGYGLNTTNHGSSVSPGFLNVLFNVILDTTALSVLLWELGIIGTLFFISMTLYILRVCKPTPLFNRDDVTQE
DIRLMSYPPAFNAFAIACLLSLPYSQILMLVPMLQFIFYLSLGSNLVIRKSLITAAANHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51319; Mature: 51319

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure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HCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA