The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694026

Identifier: 209694026

GI number: 209694026

Start: 462468

End: 462953

Strand: Reverse

Name: 209694026

Synonym: VSAL_I0425

Alternate gene names: NA

Gene position: 462953-462468 (Counterclockwise)

Preceding gene: 209694027

Following gene: 209694025

Centisome position: 13.92

GC content: 36.21

Gene sequence:

>486_bases
ATGAAAAAGAAACTCTTACTTTGCTTATTATTACTTTTGCCCTTTAGTGCATTTAGTGATGAGGTATTGAAATTAGATTG
GATTGATTTAGTTCCAGAGCAGGAAAGACATCAATTTGATGCGATAGGAATGCCTAAAGTAAATCATAATGGCGCGCAAA
TGCAACAATCTCTTGTTGGTGGTGTTAGGCAAGAATTAAATGGCAGTATGGTAAAAATTCCAGGCTTTGTTATTCCATTA
GAAGGGGATGATAAAATGATTACTGAATTTTTATTAGTGCCTTATTTTGGTGCCTGCATTCATGTGCCACCGCCGCCACC
CAATCAAATTATTTATGTGAAATTTAAAAAAGGGGCGCCAATTCAACAACTGTGGGATGTCGTTTATATCGTAGGTACAT
TAAAAACAGAAACGATAGACAGTGAACTCGCAGAAACAGGCTATCTTATTGATGGGGTTCGCTTAGAAGAATATGATGAT
GAATAA

Upstream 100 bases:

>100_bases
CGTCTTGTGCTCTGGTTTTATTATTGGTGTTATTCCAGCAATACAAGCGTATCGCCACTCATTAAGTGATGGTATGACAA
TAAGACTTTAAGGATAAATA

Downstream 100 bases:

>100_bases
CTAATATCAACTCATTAACCCTAGTTTATCTTGATGATTTATATAAACCCAGAGAGATAAACTAGCGCAACAGTATAGCT
AACAATTAAAACTGCACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transporter NiCoT Family; Conserved Secreted Protein

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKKKLLLCLLLLLPFSAFSDEVLKLDWIDLVPEQERHQFDAIGMPKVNHNGAQMQQSLVGGVRQELNGSMVKIPGFVIPL
EGDDKMITEFLLVPYFGACIHVPPPPPNQIIYVKFKKGAPIQQLWDVVYIVGTLKTETIDSELAETGYLIDGVRLEEYDD
E

Sequences:

>Translated_161_residues
MKKKLLLCLLLLLPFSAFSDEVLKLDWIDLVPEQERHQFDAIGMPKVNHNGAQMQQSLVGGVRQELNGSMVKIPGFVIPL
EGDDKMITEFLLVPYFGACIHVPPPPPNQIIYVKFKKGAPIQQLWDVVYIVGTLKTETIDSELAETGYLIDGVRLEEYDD
E
>Mature_161_residues
MKKKLLLCLLLLLPFSAFSDEVLKLDWIDLVPEQERHQFDAIGMPKVNHNGAQMQQSLVGGVRQELNGSMVKIPGFVIPL
EGDDKMITEFLLVPYFGACIHVPPPPPNQIIYVKFKKGAPIQQLWDVVYIVGTLKTETIDSELAETGYLIDGVRLEEYDD
E

Specific function: Unknown

COG id: COG3495

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18153; Mature: 18153

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLLLCLLLLLPFSAFSDEVLKLDWIDLVPEQERHQFDAIGMPKVNHNGAQMQQSLVG
CCHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHH
GVRQELNGSMVKIPGFVIPLEGDDKMITEFLLVPYFGACIHVPPPPPNQIIYVKFKKGAP
HHHHHHCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCC
IQQLWDVVYIVGTLKTETIDSELAETGYLIDGVRLEEYDDE
HHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCEEECCCCCC
>Mature Secondary Structure
MKKKLLLCLLLLLPFSAFSDEVLKLDWIDLVPEQERHQFDAIGMPKVNHNGAQMQQSLVG
CCHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHH
GVRQELNGSMVKIPGFVIPLEGDDKMITEFLLVPYFGACIHVPPPPPNQIIYVKFKKGAP
HHHHHHCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCC
IQQLWDVVYIVGTLKTETIDSELAETGYLIDGVRLEEYDDE
HHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA