The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is waaE

Identifier: 209693850

GI number: 209693850

Start: 284334

End: 285116

Strand: Reverse

Name: waaE

Synonym: VSAL_I0239

Alternate gene names: NA

Gene position: 285116-284334 (Counterclockwise)

Preceding gene: 209693851

Following gene: 209693849

Centisome position: 8.57

GC content: 38.06

Gene sequence:

>783_bases
ATGACAACATCCTCTCCAACCTTAGCGGTTGCGCTTATTGTTAAAAATGAAGCAAAACATTTAAAAGCCTGTCTTGATAC
CGTTGCTGATTGGGTTGATGAAATTGTGATAATGGATTCAGGAAGTACTGATTCAACTGAAACAATTGCTCGTGAATTTA
CTGATAAATTTATTGTAAATAAAGAGTGGCCAGGGTTTGGCAAACAACGTCAATTAGCACAACAGCACGTTACCTCAGAT
TATGTATTATGGCTTGATGCCGATGAGAGAGTCACTCCAGAGTTAAAAACTGAAATTTTAGCTGCCGTGAAAGCAAACAA
GACAAAGACCGCATATAAAATAAATCGCTCAAGCTCTGCGTTTGGGAAATTTATTAAGCACTCTGGTTGGTCTCCTGATT
GGGTTGTTCGTTTATATAAAACTGATGAAACTCAATATAGCGACTCTCTAGTGCATGAAAGTGTCGTTATTCCAAACCAT
ATTCAAGTTAACGCTTTAACTGGTCGCTTATTACATTTCACATACGATGCTTTGCAGCAATATAATGCAAAAAATGTCAT
GTATATAAAATCTTGGGTCGACCAACGCGAAGGAAAAAAGAAAGGCTCACTCAGTGGTGCTTTTCTTCATGGATTCTTTT
GTTTTATCCGTATGTATATTTTAAAGCGTGGTTTTTTAGATGGCCGCCACGGATTACTACTTGCAACACTAAGCGCTAGC
GTGACGTTCAATCGTTACGCTGATCTATGGCTACGAGACTACAATAAAGCAAACAAGGAATAA

Upstream 100 bases:

>100_bases
AAGGCGAGCATATAATGCAAGATATAACGCTTGATATGGTTGCCCGCTCATTTCAGCAACTGGAAATCATCCTAAACAGC
ACCGAAGAAGGGAAAAAATA

Downstream 100 bases:

>100_bases
TGATGAAAATTTATCATGTTAATCTTGCTCGTGGTTTCAGTGGCGGGGAACAGCAAACCCTCGCACTCATCCAGCAACAT
CTAAAAGAGAAGCAAAATAT

Product: glucosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTTSSPTLAVALIVKNEAKHLKACLDTVADWVDEIVIMDSGSTDSTETIAREFTDKFIVNKEWPGFGKQRQLAQQHVTSD
YVLWLDADERVTPELKTEILAAVKANKTKTAYKINRSSSAFGKFIKHSGWSPDWVVRLYKTDETQYSDSLVHESVVIPNH
IQVNALTGRLLHFTYDALQQYNAKNVMYIKSWVDQREGKKKGSLSGAFLHGFFCFIRMYILKRGFLDGRHGLLLATLSAS
VTFNRYADLWLRDYNKANKE

Sequences:

>Translated_260_residues
MTTSSPTLAVALIVKNEAKHLKACLDTVADWVDEIVIMDSGSTDSTETIAREFTDKFIVNKEWPGFGKQRQLAQQHVTSD
YVLWLDADERVTPELKTEILAAVKANKTKTAYKINRSSSAFGKFIKHSGWSPDWVVRLYKTDETQYSDSLVHESVVIPNH
IQVNALTGRLLHFTYDALQQYNAKNVMYIKSWVDQREGKKKGSLSGAFLHGFFCFIRMYILKRGFLDGRHGLLLATLSAS
VTFNRYADLWLRDYNKANKE
>Mature_259_residues
TTSSPTLAVALIVKNEAKHLKACLDTVADWVDEIVIMDSGSTDSTETIAREFTDKFIVNKEWPGFGKQRQLAQQHVTSDY
VLWLDADERVTPELKTEILAAVKANKTKTAYKINRSSSAFGKFIKHSGWSPDWVVRLYKTDETQYSDSLVHESVVIPNHI
QVNALTGRLLHFTYDALQQYNAKNVMYIKSWVDQREGKKKGSLSGAFLHGFFCFIRMYILKRGFLDGRHGLLLATLSASV
TFNRYADLWLRDYNKANKE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 29635; Mature: 29504

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSSPTLAVALIVKNEAKHLKACLDTVADWVDEIVIMDSGSTDSTETIAREFTDKFIVN
CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHEEC
KEWPGFGKQRQLAQQHVTSDYVLWLDADERVTPELKTEILAAVKANKTKTAYKINRSSSA
CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHH
FGKFIKHSGWSPDWVVRLYKTDETQYSDSLVHESVVIPNHIQVNALTGRLLHFTYDALQQ
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCEECCCCEEEEHHHHHHHHHHHHHHHH
YNAKNVMYIKSWVDQREGKKKGSLSGAFLHGFFCFIRMYILKRGFLDGRHGLLLATLSAS
CCCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHH
VTFNRYADLWLRDYNKANKE
EEHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTSSPTLAVALIVKNEAKHLKACLDTVADWVDEIVIMDSGSTDSTETIAREFTDKFIVN
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHEEC
KEWPGFGKQRQLAQQHVTSDYVLWLDADERVTPELKTEILAAVKANKTKTAYKINRSSSA
CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHH
FGKFIKHSGWSPDWVVRLYKTDETQYSDSLVHESVVIPNHIQVNALTGRLLHFTYDALQQ
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCEECCCCEEEEHHHHHHHHHHHHHHHH
YNAKNVMYIKSWVDQREGKKKGSLSGAFLHGFFCFIRMYILKRGFLDGRHGLLLATLSAS
CCCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHH
VTFNRYADLWLRDYNKANKE
EEHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]