Definition Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome.
Accession NC_011206
Length 2,885,038

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 198284669

GI number:

Start: 2565631

End: 2566824

Strand: Direct

Name: Not Available

Synonym: Lferr_2589

Alternate gene names: NA

Gene position: NA

Preceding gene: 198284668

Following gene: 198284670

Centisome position: NA

GC content: NA

Gene sequence:

>1194_bases
ATGAAGGCAGCGGTGGGCGTTATGCGGTCAAAGAGTGTGCTCCAATTGGCGATGGCCTTCGCCATGATGGGGCTCTGCGG
CTGCGCCTCTTACCTCCCTTATTCGGGTCCTCGCACCTCGTCGGTCGTGGATGCCGGGGAGAACAAGGCCTTGGCTGGCA
TCCAGGTGGTGGATGTCAATTATGCCCTGGCGCGTCTCATTAAGGATAAGCTGGAGAAACCCGCCTTTTCGTCCCTGGCG
GACTTGGCCAACGCGAACCCCAATCTGTATACTGTGGGACCAGGGGATACCCTGCAGGTGTACATCTGGGAGGCGCCTCC
GGCCATGCTCTTTACCTCCGTCCCTAGTTCCATGGCTACGCCATCGGGTTCGATGATGACCGCGATCCCTGAGCAAATAG
TGAGCAGTGACGGTGATATCGCCATTCCTTTTGCGGGTGAGATTTCCTGTTCCGGTCGGACACTGACTCAGATCGAGGCG
GAAATCCGGCAAAAACTGCGGGGTCAAGCCAACGACCCGCAGGTGGTGGTGAGTTTGGTCAACAATTATTCACGGAGTGT
TACCGTCGTGGGCAACGTGACGCGTAGCACGTCGGTACCCCTGGTGCCGGGCGGTGTGAATGTGCTCCAGGCCCTGGCGG
CGGCGGGCGGGGTGGACAAGCCGGTAAACAAAGTCACCATGCAGATTTCCCGCGCCGGAAAGGTGGTGGATATGCCTCTG
GAAAGCGTCATCAAAAATCCCCAGGAAAATATCTCATTACATGCGGGGGACATACTCACGGCCCTGTATGAACCCCTGCA
TGTCACCATCCTGGGAGCTACGACGCAGAGCCGGGAGCTGGACTTTGAAGCGACGGGCGTCAGCCTGTCCCAGGCCTTGG
CCCGCGCGGGCGGTCTGAATGGTCATGAGGCGGACGCGAAAGGGGTCTTCGTCTTCCGCTTTGAAAAACCCTCCCTGCTG
CCCCAATGGCCGCATCCCGTGCAGGTGGCGCAGAACGGCCTGGTCCCGGTGGTGTTCCGCTTTGATCTCAGTAATCCGGC
TACGTTGTTCGCGGCGCAGACCTTCCCCATCCAGAATCATGACCTGATTTATGTGGGTACCGCCCCGATCACGGAACTTC
AGAAGTTTCTGGGCATGGTTGTGCAGATCGTCTACCCCATTCAGGGTCTGACCAATGCAGGGGTGCTCCCTTGA

Upstream 100 bases:

>100_bases
CAGTTGAATACGCTTTATCGTGAGGCACACCATGATGGCTAAACCGGGAATGCAGCGTGGAATGACGCAGCAATCAGAGA
TAATGGATGGGAGACGGAAA

Downstream 100 bases:

>100_bases
GTGTTTGGGTCATATGAACTTGGGTGACCGCCCCTTATTGATTGATGTTACGCGCTTGATAGAGCGGGCGCGTAAAAAGC
GCATGCCCACCGGCGTGGAC

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>397_residues
MKAAVGVMRSKSVLQLAMAFAMMGLCGCASYLPYSGPRTSSVVDAGENKALAGIQVVDVNYALARLIKDKLEKPAFSSLA
DLANANPNLYTVGPGDTLQVYIWEAPPAMLFTSVPSSMATPSGSMMTAIPEQIVSSDGDIAIPFAGEISCSGRTLTQIEA
EIRQKLRGQANDPQVVVSLVNNYSRSVTVVGNVTRSTSVPLVPGGVNVLQALAAAGGVDKPVNKVTMQISRAGKVVDMPL
ESVIKNPQENISLHAGDILTALYEPLHVTILGATTQSRELDFEATGVSLSQALARAGGLNGHEADAKGVFVFRFEKPSLL
PQWPHPVQVAQNGLVPVVFRFDLSNPATLFAAQTFPIQNHDLIYVGTAPITELQKFLGMVVQIVYPIQGLTNAGVLP

Sequences:
NA

Specific function: NA

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA