Definition | Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome. |
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Accession | NC_011206 |
Length | 2,885,038 |
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Identifier: 198284627
GI number:
Start: 2516056
End: 2519652
Strand: Direct
Name: Not Available
Synonym: Lferr_2547
Alternate gene names: NA
Gene position: NA
Preceding gene: 198284626
Following gene: 198284628
Centisome position: NA
GC content: NA
Gene sequence:
>3597_bases ATGACCACCATCCTCGACCCCCTGCACCTGCCCCTGCACGGCAGCCGCCTCATCGAGGCCAGCGCCGGCACCGGCAAAAC CTGGACCATCGCCGCCCTCTATCTGCGCATGATCCTTGGACACGGCAGCGAAGGTGAACATTTTCCCCGCCCCCTCCTGC CCGAAGATATTCTGGTGATGACCTTCACCCGCGCCGCCACCCAGGAACTCAAGGAGCGTATCCGCGATCGCCTGCAAACG GCTGCCCGATATTTCCGCGGCACCGAACACCCAGCGCAGCCGGATCCCTTTCTCGAAGCGCTGCTGGCCGACCATCCCGA CCCCGAGGTCCGCGCCCGCGCCGCACACCAGCTTACCTTGGCGGCCGATGCCATGGATGACAGCGCCATTTTTACCATCG ACGCCTGGTGCCAGCGCACCCTGCGCGAGCACGCCTTCGCCACTGGCAGCGATTTCCGCGAAACCCTGCTCCTGGATGAG ACCGACCTGCGCGACGATGCCGTACGCGACTTCTGGCGGCAGGAAATCTACCCGCTGGGCGAACCCGCCCTCGATGAGGT CCTCCAGCTCTTTTCCGGCCCCGATAAGATCCGGCAGGAGACAGCAGCCCTGTGCAAACTCGATCCGCCCCTGCCCGCCC CCGCATCGAGGCTGGCGGACTGGCTGCCCGATGCCCTCGCCGCGCCCCGACGGCGACTCGCCACCCTCAAGGCGCAATGG GCGGCGGAGCATGATGCCTTTGCGGAGTGGCTGTCAGGGCTCGTAAACGGTCCCAAGGCAGACAATCCATTGAATGGTAA TACCCTAAGCGCAGCTATTGTCAGTCGGGCCCTCGCCGCATTGCGTGATTGGGCCGACCGTTCCGATCCATTGATTCCCG ACGAACTGGATAAATGCCAGCGCCTTTCTGCCAGCAAACTGCCCGAGTATTGCAAAAACAAACCGCCTCCCGTCCTCCAC CCCGCTGCCGAGACACTGGATACCCTGTTCAGGGAGTTGGAGACCATCGCTCAACAGTTCACCCGACTGCACGGTGAAAT TCGCACCCACGCCGCCGCCTGGATCAACGCCCGGCTGAGTCGGCTCAAGGCCCAGAGCGGACAGGTCAGCTTTGCCGACT ATCAGCGGCGCCTCGCCAGGGTACTGCACGACAAAACCCAGGGACCGGCACTCGCCGCCCGCCTGCGGCAGAAATATCCC GCCGCCCTCATCGACGAGTTTCAGGATACCTCCGCCCTGCAATATCAGATCTTCGACGACATCTACCACGCCGCCGACAA CAACCCCGACACTTTGCTTCTGCTCATCGGTGACCCCAAACAGTCCATCTACGCCTTTCGCGGCGCGGACATCGACAGTT ATCTGCAGGCACGTCGCCTGACCGAGGGCCGCCATTACGCCCTCGGCACCAATTATCGCTCCAGCCACGCGCTGGTCAGC GCCCTCAACGCCATCTACACCGCCGCCGAACACGACGACCCGCAAGGCGCTTTTGCCTATGCCGCCCCCGGTGCCGACAA CCCGCTCCCTTACCAGCCGGTGCAGGCCCATGGCCACCAGAAAGTCTGGCGGATCCATGGCAAAGCCGCCCCCGCCCTGA CGTTCTGGGGTGCCGGCGAGAAGCTGAACAAAGGCGACTATCTGGAACGCTGCGCAGCACAGGCCGCAGAATGTATTGTC GGACTGCTCGACAATCCGGAAGCAGGATTCGCGCAGGAGGGAGAAATCACCCGACGGCTGGAGGCCAAGGACATCGCCAT TCTCGTCCGCGATCGTCATGAAGCCGCCAGCATCCGTCAGGCCCTCCACCACCGCCAGTTACGCAGCGTCTTTCTCTCGG AGCAGGATTCCGTCTATGCCAGTGAGGAAGCCCGCGAACTGCTTCTCTGGCTGGAGGCGGTGGCCGAACCCGAAGATGCC CGCCGTCTGCGCGTCGCCCTCGCCCTGCCGCTGCTGGGACAACCCCTCAGCGCCCTGGATGCCTTTCATCAGAACGAAAC GGCCTGGGAGGCGCAACTGGAGCAGTTTCAGGATCTGTCCCGGCAATGGCGGCGGCAGGGCGTGCTGGCCATGCTCCACC ACAGCATCCATCAGTTCGGCATTGCCGCCCGCCTGCTGACGCAGCCCGAGGGCGAACGTCGCCTCACCAACCTGCTCCAT CTCGGCGAACTCTTGCAGCAGGCGAGCGCCACCATCGACGGCCCCGAGGCCCTCGTTCGCCACCTGCATCAGGCCATCGC CGCCGGAAGTGATCAGAGCGATGCCCACATCCTGCGTCTGGAGAGCGATGCCGGACTGCTGCGCGTGGTCACCATCCACG CCGCCAAAGGTCTGCAATATCCCCTGGTTTTTTTGCCCTTCATCGCCACCTGCAAGGCCGCCAGGGCCAACCCCTTTACG GTCATCCACAGCGCGGAAGGACAGCCCGCCATCCACTGGGAAAGTGGCGACACGACGGCGGCGGAAAGGGCACGGTTGCA GGAAGATCTCCGCCTCCTCTACGTCGCCCTCACCCGTGCCGAGCACGCCCTCTGGCTGGGCCTCGCCGCACCGAAGACGG CGGGAACACCGATCTTTGCCGGCAGTGCCATCGCCCATCTGCTGGGTAGCGAACGCACCGCCCGCGATCTCGCCACCTTG CTCGAAGACTGCGCCCGCCTCTCTCCGGAGATTGTCGTCGAGACGCTACCGGACAGCATCCCCACGACGCTGTTCGTGCG GCCCCGCAACAACGCCCACAACCCGCCCCCAGAGTACACCGCCAGCTTCGAGAAGCACTGGGGCGTTGCCAGCTTCTCCC ATCTGGTGCGCGAACTCCCTGCCGATCCGGCGGCGCCACCGACGCCCCGGCGCGCCCAGGCCGGCGCCCCCTGGCATCGC TACCCGCAAGGCATGAACGCCGGCACCTTTCTCCACGACCAACTGCAACGCCTCGCCCAGAATGGCTTTGCCCAAATCGG TCAGGACCAATTTGTCGAACAACTGCACAAGGCCTGTACCCAGGCCGGCCTGGGCGACTGGGTCGGGGAGACCGCCGAAT GGCTGCAAGCCATCGTCCATAGCCCCCTTGCCCCCCTCACGGCGGCGCTCTGCGATCTCAGCGACACCCTGAGCGAAATG GCCTTCTGGTTTCCCAGCGACGCCTTGCGCAGCGACGACCTGGACAGGCTCTGCCAACAGCATATTTTCCCCGGTGCCGA TCGCCCCAGGCTCCCCCAGCGGGTCATTCACGGCATGATGCGCGGCTTCATGGACCTCGTCTTCGAGCAAGGAGGGCGTT ACTACGTCCTCGATTACAAATCCAACGTCCTCGGCAGCGAGGATGCCGATTACCACGCCAAAGCGCTGCGCGACGCCACC CTCGGTCATCGCTACGAACTGCAATCCAGCCTCTACCAACTGGCCCTGCACCGCCTGCTGCGCCAGCGCATGGGCAGCCG CTACCGGCCCGAGACCCATCTCGGCGGCACCCTCTTCTTCTTCCTGCGCGGGCTGCAAGGACCGGAGCGAGGCGTGCTCC ATCTTCCCGCCGACCTCGCCCTGCTCGATGCCCTCGACGGCCTCTTCGGCTGGCCGCAGCGGGCAACCCAGCCATGA
Upstream 100 bases:
>100_bases CCCGAACCGGGCCGCAACGACGCGGCTTTGCAGAATACGCCGCAGCCCTCTACCGCCCCTTCGCCGGCTGGCTGGAAACT TTGGAGTGGCAGGCGCATCC
Downstream 100 bases:
>100_bases ACCAGCCCATGACCAGCCTCATGATCGACCAACTCCGCGCCTGGACCAGCGCCGGCTGGCTACGGCCCCTCGACCTTGCC TTCGCGCAGTTCCTCATCCG
Product: exodeoxyribonuclease V subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1198_residues MTTILDPLHLPLHGSRLIEASAGTGKTWTIAALYLRMILGHGSEGEHFPRPLLPEDILVMTFTRAATQELKERIRDRLQT AARYFRGTEHPAQPDPFLEALLADHPDPEVRARAAHQLTLAADAMDDSAIFTIDAWCQRTLREHAFATGSDFRETLLLDE TDLRDDAVRDFWRQEIYPLGEPALDEVLQLFSGPDKIRQETAALCKLDPPLPAPASRLADWLPDALAAPRRRLATLKAQW AAEHDAFAEWLSGLVNGPKADNPLNGNTLSAAIVSRALAALRDWADRSDPLIPDELDKCQRLSASKLPEYCKNKPPPVLH PAAETLDTLFRELETIAQQFTRLHGEIRTHAAAWINARLSRLKAQSGQVSFADYQRRLARVLHDKTQGPALAARLRQKYP AALIDEFQDTSALQYQIFDDIYHAADNNPDTLLLLIGDPKQSIYAFRGADIDSYLQARRLTEGRHYALGTNYRSSHALVS ALNAIYTAAEHDDPQGAFAYAAPGADNPLPYQPVQAHGHQKVWRIHGKAAPALTFWGAGEKLNKGDYLERCAAQAAECIV GLLDNPEAGFAQEGEITRRLEAKDIAILVRDRHEAASIRQALHHRQLRSVFLSEQDSVYASEEARELLLWLEAVAEPEDA RRLRVALALPLLGQPLSALDAFHQNETAWEAQLEQFQDLSRQWRRQGVLAMLHHSIHQFGIAARLLTQPEGERRLTNLLH LGELLQQASATIDGPEALVRHLHQAIAAGSDQSDAHILRLESDAGLLRVVTIHAAKGLQYPLVFLPFIATCKAARANPFT VIHSAEGQPAIHWESGDTTAAERARLQEDLRLLYVALTRAEHALWLGLAAPKTAGTPIFAGSAIAHLLGSERTARDLATL LEDCARLSPEIVVETLPDSIPTTLFVRPRNNAHNPPPEYTASFEKHWGVASFSHLVRELPADPAAPPTPRRAQAGAPWHR YPQGMNAGTFLHDQLQRLAQNGFAQIGQDQFVEQLHKACTQAGLGDWVGETAEWLQAIVHSPLAPLTAALCDLSDTLSEM AFWFPSDALRSDDLDRLCQQHIFPGADRPRLPQRVIHGMMRGFMDLVFEQGGRYYVLDYKSNVLGSEDADYHAKALRDAT LGHRYELQSSLYQLALHRLLRQRMGSRYRPETHLGGTLFFFLRGLQGPERGVLHLPADLALLDALDGLFGWPQRATQP
Sequences:
NA
Specific function: NA
COG id: COG1074
COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA