Definition | Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome. |
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Accession | NC_011206 |
Length | 2,885,038 |
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Identifier: 198284073
GI number:
Start: 1966393
End: 1968288
Strand: Reverse
Name: Not Available
Synonym: Lferr_1970
Alternate gene names: NA
Gene position: NA
Preceding gene: 198284074
Following gene: 198284072
Centisome position: NA
GC content: NA
Gene sequence:
>1896_bases ATGAGAGACGGTGAGAGTGTAGTGGATAATGAATCTCAGCGGTCTGAGCTGAAGCGGCTTATTGCGCGTGGTAAAGAGCA AGGCTACCTGACCTATCGCGAGATCAATGATCATTTGCCGGAAGAGGTTTTCGACCCCGAGCAGATGGAAAATGTCATCT CCATGATCAATGACATGGGTATTGAAGTCTTTGAGGAGGCTCCGGACGACGATACCCTGCTGATGGATGGGGAAGGTGGT ACCGTAGTCGCCGCTCAGGAAGCGGAAGAAGCGGCAGAGGAAGCCCTGGCCGTGGTCGAGGCGGATATCGGGCGAACCAG TGATCCGGTGCGCATGTACATGCGCGAGATGGGCAGCGTGGAACTGCTCACGCGTGAAGGCGAAATCGAAATTGCCCGGC GTATCGAAGATGGTCTGATGCAGGTATTGCGCGCTGTATCGACCTGCCCGACGACCATCTCTCTTCTTCTGGACGCCGCG GCTCGGGTGGAGCGCGGCGAGACGCGCCTGGATGAAGTGGTCGACGCCTTTATTGATCTTAGCGCGCTGGATGCAGAAAC CGTCAGTGAGGCAGAAGAAAGCGTGCTGGTGGAAGGCGACGATCTGGACGTCGATGAGGATGAGGAAGAATCCGAAGACG GTGATATCGAAGTCGTAGACAAGGGGCCACAGCTCGAAGATGCACTGGAACGTTTTGCGGTCATCCGTGCTGCGTATACC GCGCTGCTGGCCAGCCATGCCGAGGGGGAGATGCATGGTGAAAGTTATCAGCGGCAGCGCCGGGAGCTCGCCGAACGTTT CCTGGAAATCAAACTCAACGGTCGTCAGATTGACGTCATGACCGACGCCCTGCGCGGGCTAACGGAAGAGGTGCGTCAGT GCGAACGGGAGTTGATGGAACTGTGCATTGAACGTGCGCGCTTCCCGCGCAAAGAATTTGTGCGCAGTTATCCCGGTCAT GAGGGTGATATCGGCTGGATTGATCAGCAAATCGCCGCTGGTCATGCCTATAGTACCCGTTTGGTTGAGTTTCGTGATGA TATCGTGGCGATCATGAAACGCTTGGCGAATATTGAGAAGCGTGCCGGTTTGCCGATTGCCGAGATCAAAGAGGCCAGTC GCCTGATGTCCATTGGTGAGGCCAAGGCGCGGCGTGCCAAGAAGGAAATGGTGGAGGCCAATCTGCGTTTGGTGATCTCT ATCGCCAAGAAGTATACCAATCGTGGCCTGCAGTTCCTGGATCTGATTCAGGAAGGAAATATCGGTCTGATGAAAGCGGT GGACAAGTTCGAATACCGACGTGGCTACAAATTCTCTACTTATGCGACTTGGTGGATACGCCAGGCCATTACGCGGAGTA TTGCGGATCAGGCGCGGACCATTCGTATCCCGGTACATATGATCGAAACCATAAACAAACTCAATCGAATCAGTCGCCAG ATGCTCCAGGAAATGGGACGTGAACCGTCGCCTGAAGAGTTGGCAGAACGGATGGAAATGCCCGAGGATAAAATCCGCAA GGTGCTCAAAATTGCCAAGGAGCCTATCTCCATGGAGACGCCCATCGGTGACGATGAAGATTCGCACCTGGGCGACTTCA TCGAAGACCGGAATGTGACGGCGCCAGCGGATTCTGCCGTTAACGCCGCCATTCGCGAAGTGGTCGAGGAGTTGCTTGAT AATGGCCTGACAGCGCGGGAAGCCAAGGTGTTGCGTATGCGTTTTGGCATCGGGATGAATACCGACCACACGCTGGAGGA GGTCGGCAAGCAGTTTGACGTTACTCGTGAGCGTATCCGCCAGATTGAAGCCAAGGCGCTGCGCAAACTGCGTCATCCCT CTCGATCGGAGCGGTTACGTAGTTTTGTGGACGGTGAAGTGACGATTCCATCGTGA
Upstream 100 bases:
>100_bases ATGAAAAATGGGCTGAGGGTGCAGTTCTGTGACGGGGCACCTTTCCATGCGTGTGGTTTTTCCTATATAATGCGCGGCTT TCCGCGAGTGCAGGTTGGTT
Downstream 100 bases:
>100_bases CGGATGTTTTTTAGCGGTATGAGGCGTGGGATCAGTGCATTCCACGCCGTTCTTCAGGGCCTGTAGCTCAGTTGGTTAGA GCAGGGGACTCATAATCCCT
Product: RNA polymerase sigma-70 subunit RpoD
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>631_residues MRDGESVVDNESQRSELKRLIARGKEQGYLTYREINDHLPEEVFDPEQMENVISMINDMGIEVFEEAPDDDTLLMDGEGG TVVAAQEAEEAAEEALAVVEADIGRTSDPVRMYMREMGSVELLTREGEIEIARRIEDGLMQVLRAVSTCPTTISLLLDAA ARVERGETRLDEVVDAFIDLSALDAETVSEAEESVLVEGDDLDVDEDEEESEDGDIEVVDKGPQLEDALERFAVIRAAYT ALLASHAEGEMHGESYQRQRRELAERFLEIKLNGRQIDVMTDALRGLTEEVRQCERELMELCIERARFPRKEFVRSYPGH EGDIGWIDQQIAAGHAYSTRLVEFRDDIVAIMKRLANIEKRAGLPIAEIKEASRLMSIGEAKARRAKKEMVEANLRLVIS IAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQ MLQEMGREPSPEELAERMEMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDRNVTAPADSAVNAAIREVVEELLD NGLTAREAKVLRMRFGIGMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSERLRSFVDGEVTIPS
Sequences:
NA
Specific function: NA
COG id: COG0568
COG function: function code K; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA