Definition | Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome. |
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Accession | NC_011206 |
Length | 2,885,038 |
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Identifier: 198284046
GI number:
Start: 1932469
End: 1934676
Strand: Direct
Name: Not Available
Synonym: Lferr_1941
Alternate gene names: NA
Gene position: NA
Preceding gene: 198284045
Following gene: 198284047
Centisome position: NA
GC content: NA
Gene sequence:
>2208_bases ATGACCAAGATGCATTCCACTGCCTTGCGCAACGCGGTAGCCTTTGCCGTTTTTACCCTCGGTAGCGGCGCCGCCTTTGC CGCCGATGAATCCCTCGGTACCGTCACCGGTACGGCCGGTGCCGCCAACAACTTTTTCGGCAGCGCACCGGCCGGCAATG TCGGGCAGACGCCAAGCGAAGATCTGAAAAAGATCCAGCGCTTCAAAAAGGGTGCCACCAATGCTGAAACTCTCATCACC AAGGGGCAATTCGACCTCATCACCCCCACCGACTCTTACACCCAGGCCCTGCGCAACATGCCCAACACCCTCGTCGTCAG CGGCGGCGACAGCATGGATGGAGACGATATTTATATCAACGGCTTTGGAAAGAACCTGATCAACTTTACCCTGGATGGCA TCCCCCTCAACGACAACGACAGCTACACCTTCTACAGCAACGAATTCATCCCCAGCCGCCTGATATCCGGCACCAGATAC TATCCTGGCGCCGAATCCGCCGCCATTCCCGGCCTGTCTTCCTTCGGCGGCTCCGTGGAAACCTACAGCCTCCAGCCCTC TCCCTACCCCTTTGTCCGTCCCCTGGCCGGGGTCGGGTCCTTTGGCAAATACAATGCCGGCGGCCTCATCAATACCGGTC TGTTCCTGAGAAACATTGCCCCCACCTCCGCCTGGGTCTATTTCAACAAGAACCAGCGGGATGGCTATTTCCAGAACAAT CCAGCGGTGCAAAACCAGTTCCTCTTCAAGTCGGTTTCGCAGATCGGGCCCGGCCAGCTCACCTTGTTCTTCAGCCAGAA CAACCAGCGCTTCAATTACTACAACGGCGCCACGGCTGCGCAGATCGCCCAGTATGGTCGTGACTACAACAGCAATACCG ACCAACCCTTCCTCGCCAATGGCAAACCCAACACCGCCTACACCGGCTACAATTACAATCAATACCTCAATTGGCTGAGC TATGCCAAATATAAGGCGCAATTCTCCTCGGTCAAATTCTCCAATCAATTCTACTACTACTATGGCAATGGTTTTAGCGC CGGCGCCAGCACCTTCAGCCAAACCGTACTGGCGCCCAATGGCAGCATTATCCACGCCGCCCCGCCGAGCAATGGCGTAT TGCAACGTCATAGCGTCAACCAGACCGATCGCTGGGGCAATATCCTGCGCATGCGCTTTCCCCTCGGGCCGGTGGCCACC GAGCTGGGTTTCTGGTTCAACCACAACGATACCACCCACGACAGCCAGTATTACAACGGCAACACCTATGTCGGCTCCAG CTACCTCGAACCGGTGGTTACCGACACCTATGAACCTTACGTCGCCCTCACCTATCAACCCATGGATAGCCTCAAATTCA GCGCCGGCGTCAAATATCTCTATGCGACCCGCGATTTCCGCGACGATACCGCCCTGGCCCAGGGCAAACCGGGGCAGTTC AATGCCACCTTCCGTTCCCTGCTACCTTCCCTCGGCGTCAACTATCGCATCCTGGACAATTGGCACATCTATGCCAACTT CACCCAAAACAGCAACCCTCCCGGATATAACCAATTCTACACCGGCACCTACAATGCCAGTCTGAATCCCCAGAAGGCCA ACACCTACGATATCGGCACCGTCTGGGATACGGGCGTGTGGTCGGGCGCGCTGGACCTCTTCCGCGTGGATTTCCAGAAC TACATCCTCTCCACCACTGTCGTCCTTCCCGGTAGCGCCATCAACCAGACGGTCCTCGCCAACGCCGGCACCGCCATCAA CCAGGGCATCAGTTGGCAGAACAATTTTGTCATCAATGACATTTTCAGCGCCTACGCCAACTTCGGTTTCCTCGACGCCC GGCTCAAATCGGCCGGCAAGCCCTTTCCCTATGCGCCCCATCATACCGAGGCGGCGGGTCTGATCGTGCGTTACCGTGGC TTCCGCGGCAGCATCGGCGTCAACGAAATTGGCAACGCCTATTATGCCTTGGGCGGCGGCTTTCTGCCCTTGGGCAGCCG CTTCTACACCGATGCCAGCCTGCGCTATACCTTCCGCAATGCACCTCTGGGCCGGAGCCTGGGCTTCAAGAGCGTGAGCG CCGGACTGTATCTCAATAATCTCTTCGATCGCAGCTATATCCAGAGCTATACCGGCAGTTCGGGCAACCCCAACAGGAAG CTCAACCTGCCCACCAACGTCTATGCCTCCCTGGAGGCCACCTTCTAA
Upstream 100 bases:
>100_bases ATCTGATAGGAGATGATCCATGAACGGTGGATAGCATAGGCACAATTATCATATCACCTTGATCAATTAGAAATTTTAAC ACCCCAGATAGGGAGCGACC
Downstream 100 bases:
>100_bases AAACCCGGACGGGTGCCCCACCCGGGACACCCCCTTTTTCAAATGGAGTTAGCCCATGAACTGGACCCAAATTGCCGACG TCGCCACCATGTCCGGCGGC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>735_residues MTKMHSTALRNAVAFAVFTLGSGAAFAADESLGTVTGTAGAANNFFGSAPAGNVGQTPSEDLKKIQRFKKGATNAETLIT KGQFDLITPTDSYTQALRNMPNTLVVSGGDSMDGDDIYINGFGKNLINFTLDGIPLNDNDSYTFYSNEFIPSRLISGTRY YPGAESAAIPGLSSFGGSVETYSLQPSPYPFVRPLAGVGSFGKYNAGGLINTGLFLRNIAPTSAWVYFNKNQRDGYFQNN PAVQNQFLFKSVSQIGPGQLTLFFSQNNQRFNYYNGATAAQIAQYGRDYNSNTDQPFLANGKPNTAYTGYNYNQYLNWLS YAKYKAQFSSVKFSNQFYYYYGNGFSAGASTFSQTVLAPNGSIIHAAPPSNGVLQRHSVNQTDRWGNILRMRFPLGPVAT ELGFWFNHNDTTHDSQYYNGNTYVGSSYLEPVVTDTYEPYVALTYQPMDSLKFSAGVKYLYATRDFRDDTALAQGKPGQF NATFRSLLPSLGVNYRILDNWHIYANFTQNSNPPGYNQFYTGTYNASLNPQKANTYDIGTVWDTGVWSGALDLFRVDFQN YILSTTVVLPGSAINQTVLANAGTAINQGISWQNNFVINDIFSAYANFGFLDARLKSAGKPFPYAPHHTEAAGLIVRYRG FRGSIGVNEIGNAYYALGGGFLPLGSRFYTDASLRYTFRNAPLGRSLGFKSVSAGLYLNNLFDRSYIQSYTGSSGNPNRK LNLPTNVYASLEATF
Sequences:
NA
Specific function: NA
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA