Definition Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome.
Accession NC_011206
Length 2,885,038

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 198283891

GI number:

Start: 1764960

End: 1766165

Strand: Reverse

Name: Not Available

Synonym: Lferr_1784

Alternate gene names: NA

Gene position: NA

Preceding gene: 198283892

Following gene: 198283890

Centisome position: NA

GC content: NA

Gene sequence:

>1206_bases
GTGACGGCGACGGGTCGCGGTGCGCAGATCCGGGTGGGCGGCATAGGGCTGCAAGACTTGCAGAATGGGCCGGGGATCGT
TACATTGCCGCCAGATGACAGGGTGTTTGTGCACACCCGGACAAACACAACAAGGAGTTTGGATGTCACCAGACAGGACC
GCATGTTGATGGCGGCGTTGGAGCGGGCTTTGGCGTACCAGGCACAAAGCCTTCAGGTTGTTTCCAGAACTTTTGCCCTG
ACCATCCCCCAGTTGCCGGAAGCGCTCCGGGACGCAGTCGGTAACGGTTATCTGTTGTGCCGCATTGCCGACACCATTGA
AGACGATCCGGATATGCCCTGGGAAAAAAAAGCCTGTTGGCAGGCCAAATTTCTTCAGGTCGTGGAGGGTGCGGACGATC
CCGCCGCCTTTGCTGCCGCATTGGGCGCAGACCTGTCGCCGGAGATGCCCGAAGCCGAGCACGATCTGATTCGCCACACT
CCGGAAGTCGTCGCCATCACCCACAGCCTCAACCCCACCCAGCAGGCGGCATTGTCCCGCTGCGTGCGGATCATGGGAAT
GGGGATGGCGGAGTTTCAGCAGCATGCTTCGTTGCAGGGGTTGGCGGACATGGCGGCCCTGGATCGCTACTGCTATGTGG
TTGCGGGTGTCGTCGGTGAAATGCTCACCAGCCTATTTGTCGAGTTCGAGCCGCTGCTGGCGGAGCATGATGCGGAGATG
CAGCGTTTGGCGGTGTCCTTCGGGCAGGGCCTGCAGATGACCAATATTCTCAAGGACATCTGGGATGACTGGCAGCGCGG
TGTGAGCTGGATGCCACGCGCGCTGTTTCAGCGTCATGGCTGCGATATCGCGGGGGTGCGGCCCGGCAGTCGGGACCCCG
CGTTCCAGGCGGGCCTCACCGAGCTGCTGGGTATTGCCGCGAACCATCTGCAAAATGCGCTGCGCTATACGCTGCTGATA
CCGGCCGGGCAGACGGGGATGCGGGATTTTTGCCTCTGGGCCATCGCTATGGCGGTGCTGACCCTGCGGCGGATTGCCGA
AAATCCGGCCTTTGCCTCCGGAAGCGAGGTGAAAATCAGCCGCCGCAGCGTACATCGGGTGGTATTTCTGTCGCGTCTCC
TGCATCGCTCCGATGCGCTCCTGCAGTGGAGTTTCCGGGTGGGCGTCAAACCACTGCCTTTGCCTTCCGCTGTCGCGCAA
CCATGA

Upstream 100 bases:

>100_bases
CCGCGCCGCGCGCCGCGAGCGATGAACTGATGCGCCGCGCCCTGCGTTCCGAGTTGCATGTTTCAGACGATGGCACCCCT
GGGGGCGCCGCCAGGACCGA

Downstream 100 bases:

>100_bases
ATCGTATGCTGCAACCGTTGCACTCTGGCGCGGGCATTTTTCGTTCGTCACTGGATCGGGTGATCGCGCAGGCGCGTCAG
GCGTTGGGCGGTCGGCAGGC

Product: Squalene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>401_residues
MTATGRGAQIRVGGIGLQDLQNGPGIVTLPPDDRVFVHTRTNTTRSLDVTRQDRMLMAALERALAYQAQSLQVVSRTFAL
TIPQLPEALRDAVGNGYLLCRIADTIEDDPDMPWEKKACWQAKFLQVVEGADDPAAFAAALGADLSPEMPEAEHDLIRHT
PEVVAITHSLNPTQQAALSRCVRIMGMGMAEFQQHASLQGLADMAALDRYCYVVAGVVGEMLTSLFVEFEPLLAEHDAEM
QRLAVSFGQGLQMTNILKDIWDDWQRGVSWMPRALFQRHGCDIAGVRPGSRDPAFQAGLTELLGIAANHLQNALRYTLLI
PAGQTGMRDFCLWAIAMAVLTLRRIAENPAFASGSEVKISRRSVHRVVFLSRLLHRSDALLQWSFRVGVKPLPLPSAVAQ
P

Sequences:
NA

Specific function: NA

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA