Definition Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome.
Accession NC_011206
Length 2,885,038

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Identifier: 198283517

GI number:

Start: 1353834

End: 1356320

Strand: Direct

Name: Not Available

Synonym: Lferr_1398

Alternate gene names: NA

Gene position: NA

Preceding gene: 198283516

Following gene: 198283518

Centisome position: NA

GC content: NA

Gene sequence:

>2487_bases
ATGACAGAAAAGATCCACGCCCCTGACAGATCCGTCTCCGACTACAAGGTCCAGCGCCTCGCCCGGGGCGGCAGGCTCAA
GACGACGCTCGCCGGCGTTGCGGCGGGCGTTCTCGGTTACACGTTGGGCATATCCTATGTGGCCAGGGACGTGTTTCCCG
GCTACCAGTGGACCGATGATTTCATCCAGAAGGCGCATGCCTACATCGCATTGCCCTACGGCTGGCGGCTATATGATCCC
CTGCCGTTCCTGCGGCCGATGATCCTGAACATCCACTATCCAGTGATTCATCAGGCGTTCTATGACGCCGGTCTGCCGGC
CGTGGTGCTGGGCATACTCACGGCGGGGATACTTGGGAAAAAGCACAAGGACGCGCAAAAAGCCGTCCTGGACAATCCTG
TGCATGGCTCAGCGCATTGGGCGGGTAAAAGTGATGCGATCCGGGCGGCGCTCCTGCCTTCTCCACCGCCAAAGACGGTA
ATGGACTCCCTGCGCCCCTGGCTTGGCATGCACCCTGCGAAGGGCATGCACCCTGCAAAGGGCTTACACCCTGCAAAGGG
GCTCAAGGGAGGTTCCGACTGGGCCCGCTGGAACGACCGGCAGGAAAAGCGGAAAAAGGAGGCCGCCGAGTGGCGGAAGA
GGAGGGCGGAGAGGGAGAAGAAACGCCTGTCGGAGATCCCGGAGCCGACGGTTTTCGACCGGTTCGACTCCCCCCATGTC
TGCTATGTGGGGGCCTTCGTCGAGAACGGCGCGGCCACTCCACTCCAGCACACTGGAGCGGAACACATCCTGGTCTTTGC
CCCGACCCGGTCGGGCAAGGGCGTGGGCCTGGTGCTGCCCACGTTGCTGGACGGCTGGATGGACTCGGTGGTCGTGCATG
ACATCAAGGGGGAAAACTTCAACCTGACGGCGGGCTATCGCAAGGCCATGGGCCACCACATCCTGAAGTTTTCACCGGGA
TCGGTATCCGAAGAAGGTTGCCACTTCAACCCGCTGGACGCGGTGCGTGTCGGAACCCAATACGAAGTCAAGGACGTGAT
GAACATTGCCACGATGATCGTGGACCCGGATGGCAAGGGCCTGAACGATCACTGGCAGAAAACCGGTTTTGCCCTGCTCA
CGTCCATCATCCTGCATGTGCTCTACGCCATGCCGGACAAGACCCTGCGGGGCGTCGCCGCCTACCTCAACGATCCCACG
CTGGAAAGCGTGGACGTAGCCTTTGAGCGCATGATGCAGACGGAGCATGACCCGGATGAGCAATATGGCTGGAGGGACGG
CAACGGCCAGTGCTCCAGGGTCCATCCGGTCATCGCGCAATCCGCGCGGGAGATGCTGAACAAGGCCGAGAATGAAAAAT
CGGGCGTCATTTCGACCATGATGAGCTTCCTGTCCCTCTACCGCGATCCCATCGTCGCGAAGTGGACCGAGTATTCGGAC
TTTCGCATCGCCGACCTTCAGGACGCCGAACAACCCGTCTCCCTGTACCTGGTCACCAGTCCGGAAGACAAGAACCGGCT
CAAGCCCCTCATTCGTCTGGTGCTCAACCAGATTGCCTCCCAGTTCACCGCGGAAGAACGCCTGGAAGCGAAAGACGGGC
GAATCGTCGCCAAGGGAAAGCATCGGCTGCTCTTGCTGCTCGACGAATTCCCGAGCCTGGGCAAACTCGATGTGTTCCTG
GACAGCATCGCCTTCCTCGCAGGCTACAACGTCAAGCTGTACCTCATCACCCAGGATATCGCCCAGCTGGAAGATGAAGG
CCACGGCTACGGCAAGGCCGGGGCCAAGACCATCATCGGCAACTGCCACATCCGGGCGGCCTACGCGCCCAACCAGGTCG
AGACGGCCAAGTGGATCTCCGACATGCTGGGCACCCGTACGGTGACCATGGAAAACGACAACCAGAGTTTTGACGGCTCC
CTGTTCGGTCAGAACAAGGGCTATTCGACGAGCCTCAGCTACCAGTCCCGCCCCCTGCTGACGGCGGATGAGGTCATGAC
CTTGCGGGGACCGGAAAAGGAAGGTGCCAATATCCAGACCCCGGGCGATATGCTGGTATTCGCGGCGGGCTTTCATCCCA
TCTATGGACAGCAGCTGCTCTATTTCAAGAACCCGGAATGGCTCGAGCGTGCATCCATTCGGTGGCCAGAGAAGAGCGAT
TCCATCCCCGGAGCCAGGAAAGACTACAAGGCCATACTGGGTGAGTCGGGTGGAACGCTACCCATCCCCCATATCGAGAA
AAAACCGGAAGGGCAGGATCCTGTCGAGGAAGTAAGCGAGGCTGAAAGGGCGGCATTGGCCGCGGCGGCTGGCGATCTGG
ACGCCGTGGCAGGAGAGTGCAAGCCCCTCGCGGGGTGCAAGCCCTTTGCTGAGTGCAAGCCACTCGCGGGGCGCAAGCCC
ACGGGGGACGGGAAATATGACACGTCCGAGCGGGACGCGGAGAGAGGCGTTATCGGGGGGTTGATGGGGGATGACGGCGA
CGGATGA

Upstream 100 bases:

>100_bases
TTTCCCCAATTTCGGTGGCAGGCAAAATCGCCTCAGGCGGTAACCAGCGGACCATCAGATGACTCCCACTCCTGGCCGGT
TCTCCCATAAGGATGCCGAG

Downstream 100 bases:

>100_bases
TGGTGGATGGTTCCTGCAAGAGGGAAAACCGCCTAATATAGATATCAGGGACCGCATGAGGGCTTTCTTTAACCCCTCGC
TGATGATCGATACCAGAGGA

Product: TRAG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>828_residues
MTEKIHAPDRSVSDYKVQRLARGGRLKTTLAGVAAGVLGYTLGISYVARDVFPGYQWTDDFIQKAHAYIALPYGWRLYDP
LPFLRPMILNIHYPVIHQAFYDAGLPAVVLGILTAGILGKKHKDAQKAVLDNPVHGSAHWAGKSDAIRAALLPSPPPKTV
MDSLRPWLGMHPAKGMHPAKGLHPAKGLKGGSDWARWNDRQEKRKKEAAEWRKRRAEREKKRLSEIPEPTVFDRFDSPHV
CYVGAFVENGAATPLQHTGAEHILVFAPTRSGKGVGLVLPTLLDGWMDSVVVHDIKGENFNLTAGYRKAMGHHILKFSPG
SVSEEGCHFNPLDAVRVGTQYEVKDVMNIATMIVDPDGKGLNDHWQKTGFALLTSIILHVLYAMPDKTLRGVAAYLNDPT
LESVDVAFERMMQTEHDPDEQYGWRDGNGQCSRVHPVIAQSAREMLNKAENEKSGVISTMMSFLSLYRDPIVAKWTEYSD
FRIADLQDAEQPVSLYLVTSPEDKNRLKPLIRLVLNQIASQFTAEERLEAKDGRIVAKGKHRLLLLLDEFPSLGKLDVFL
DSIAFLAGYNVKLYLITQDIAQLEDEGHGYGKAGAKTIIGNCHIRAAYAPNQVETAKWISDMLGTRTVTMENDNQSFDGS
LFGQNKGYSTSLSYQSRPLLTADEVMTLRGPEKEGANIQTPGDMLVFAAGFHPIYGQQLLYFKNPEWLERASIRWPEKSD
SIPGARKDYKAILGESGGTLPIPHIEKKPEGQDPVEEVSEAERAALAAAAGDLDAVAGECKPLAGCKPFAECKPLAGRKP
TGDGKYDTSERDAERGVIGGLMGDDGDG

Sequences:
NA

Specific function: NA

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA