Definition | Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome. |
---|---|
Accession | NC_011206 |
Length | 2,885,038 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 198283101
GI number:
Start: 940548
End: 943469
Strand: Direct
Name: Not Available
Synonym: Lferr_0969
Alternate gene names: NA
Gene position: NA
Preceding gene: 198283100
Following gene: 198283102
Centisome position: NA
GC content: NA
Gene sequence:
>2922_bases ATGCCCACCCCCTCCGAACACAAAACCGTCCAATCCCGCATCCTCCGCTACGCCGAGGCCATCGGTTGGACCTTTGTGTC CCGCGAGGCAGCCGAGCAGCGGCGCGGGTTTGATCCGGACGTGCCGCCCGCCGACCGCGCCAAGAACCGTTCGCTTTTCT TCGACGACCTGCTCGACGCCAAGCTGCGGGAATTCAACCCGCGCTACGCCGAGGCCGAGGGCGCCTTGCTCGGGCAGTTC CGCCATCTGCACGCCGACATCTACGGCAACCGGGAATTCGTCGAGCACCTGCGCAACCGGGGCAAGTTCTTCGACCATGA GGAAAAGCGCGAGCGCGACCTGATCCTGATCGATTACGACGACCCGGCGCGCAATGTTTTTGAGGTCACCGAGGAGTGGG CCTATAACAACGGCCACTACGGCACACGGGAGGATGTGGTCTTTCTCATCAACGGCATCCCGGTGCTGGTGATCGAGTGC AAGAACGCCAACAAGGATGAGGCGATTGCCCTGGGGGTGGATCAGATTCGCCGTTACCACCGCGAGACGCCCGAGCTGTT CGTGTCGCAGCAGCTCTTTACTGCCACCGACGCCATCGGTTTTTCCTACGGGGTGAGCTGGAACACGGTGCGGCGGAACA TTTTCAACTGGAAGGACGGGGAAGTCGGCAAGCTGGAGGCCAAGGTGAAGAGCTTCTGCGCCATCCCGCAGGTGCTCGCC TTCCTGAAGGACTACATCGTCTTTGCCGAGAAGGACGAGGAACTCAACAAATACATCCTGCGCCAGCACCAGACCGGCGC GGTGGAGGCGGCCGTCAGCCGCGCCCTCGATCCCCAACGCACGCGCGGCTTGGTCTGGCACACCCAGGGCAGCGGCAAGA CCTTCACCATGATCAAGGCGGCGGAGCGGCTGTTCCGCGCGCCCGGTGCGGACAAGCCGACCGTGCTGCTGATGATCGAC CGCAACGAGCTGGAAGACCAGATGCTCAAGAACCTCGCCGCGCTCGGCCTGGGCAATCTGGAGCACGCCAGCAGCATCGC CCGGCTCAACCAGCTGCTGCGCGACGACTACCGGGGCATCATCGTGACGATGATCCACAAATTCCGCGACATGCCGGCGG ACTTGAACACGCGCTCGAACATCTACGTGCTGATCGACGAAGCCCACCGCACCACCGGCGGCGACCTCGGCAACTTCCTG ATGGCCGGCCTGCCGAACGCGACCTTTATCGGCTTCACCGGAACACCGGTGGACAAGACAGTGTATGGCAAGGGCACCTT CAAGACCTTCGGCTGCGAGGACGACCAGGGCTACCTGCACAAGTATTCCATCGCCGACAGCATCGAGGACGGCACCACGT TGCCGCTGTACTACCAGCTCGCCCCCAACGAAATGCTGGTGCCGCACGAAACGCTGGACAAGGAGTTCCTGTCGCTGGCC GAAGCCGAAGGCGTGGCCGACATCGAGGAACTGAACAAGATTCTCGAACGGGCGGTGAACCTGAAGAACTTCCTCAAGGG CAAGGAGCGGATTCAGCACGTGGCGCAATTCGTCGCGGCGCATTACCGCGAGAACGTCGAGCCGCTGGGCTATAAGGCCT TCCTCGTCGGCGTCGACCGCGAAGCCTGCGCCCATTACAAGCGCGCCCTCGACCAGTTCCTGCCGCCCGAGTATTCCGAG GTCGTCTACACCGGCAGCAACAACGATTCCAAGCTGCTGAAAGAATTCCACCTCGACCCGAAGCGGGAGCGGCAGATTCG CAAGAGCTTCGGCAAGCTCGACCAGATGCCGAAAATCCTCATCGTCACCGAGAAACTGCTCACCGGCTTCGACGCGCCGG TGCTCTACGCCATGTATCTCGACAAACCGATGCGCGACCACACGCTGCTGCAGGCCATCGCCCGGGTGAATCGCCCCTAC GAGAACGAAGTGCAGGAGATGGTGAAGCCCCATGGCTTCGTGCTGGATTTTGTCGGCATCTTCGACAAGCTCGAAAAGGC GCTGGCCTTCGACAGCGACGAGATCAACGCCATCGTCAAGGACCTGAAGCTGCTGAAGGTGCTGTTCAAGAACAAGATGG AGTCCAAGGCCCCGGACTACCTCGGCCTGATCGAGCGCAACTTCAACGACAAGGACGTCGATACCCTCATCGAGCACTTC CGCGATCCCGAGCGGCGCAAGGAGTTCTTCAAGGAATACAAAGAGATCGAGATGCTCTACGAGATCATCTCGCCCGATGC CTTCCTGCGCCCATTCATTGCAGACTATGGCACCTTATCGGCGATCTACCAGGTCGTCCGCAAGGCCTACACCCGAACCG TGATGGTTGACCGCGAGTTTCAGGCCAAGACCAACCATCTGGTGCGGGAGCAGGTGGGCAGTTATGGCGTAGGTGGTTTG GGTGAGATTGTCGCGATCGACGGCAATACCATCGAGCTGATCAAGAACAAGCGCGGCGGGGATGGCACCAAAGTCATCAA CCTGATCAAAAGCATTGAAAGGCTTGCCGAGGAGGGCAGCGATGACCCTTACCTCATCGCCATGGCGGAGCGCGCGAGGG CTGTGCAGGAGAGCTTCGAGAGCCGCCAAACCAGCACTGCCGAGGCGCTGGCCGAATTGCTGCGTGAAGTGGAAGGCAAC GAAACGCGGAAGAAGGAACAGGCCGAAAAGTCCTTCGATGGCCTGACCTATTTTGTCTACCGCAGCCTGCTCGATGCGAA GATTCAGAACGCCGAGGCGGTTAGCCGGAAGATTCGCCACGCATTCACCGAGTTTCCGAACTGGAAGCGCAGCGAAAACG CCCTGCGCGAACTCCGCAAGAAAGTGACCTTTGCCCTCTTTGCCGAAACGGAGGACCTTGACCGGGTGACGGCGATGGTG GATGAGTTGTTTACCCTGCTGGAAAAGGCGGATCGGATTTGA
Upstream 100 bases:
>100_bases ATATGGGCGTTCGCGAAGCGGTTTGTTTGCTTCTCGAAGGCGGTGAGGACGCATTCAGAGCACGTGAAAATAGATATTCT CTCGTGCAACTTTAGTCATC
Downstream 100 bases:
>100_bases AACCGCAGATTTCATAGATGGACGCAAATTCAAAGAAGACGGAGTTCAAACAGCGCGTCCGCCACTGGGCCGAAAAGCTG GACGTCAAGATCGTCTGGCT
Product: HsdR family type I site-specific deoxyribonuclease
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>973_residues MPTPSEHKTVQSRILRYAEAIGWTFVSREAAEQRRGFDPDVPPADRAKNRSLFFDDLLDAKLREFNPRYAEAEGALLGQF RHLHADIYGNREFVEHLRNRGKFFDHEEKRERDLILIDYDDPARNVFEVTEEWAYNNGHYGTREDVVFLINGIPVLVIEC KNANKDEAIALGVDQIRRYHRETPELFVSQQLFTATDAIGFSYGVSWNTVRRNIFNWKDGEVGKLEAKVKSFCAIPQVLA FLKDYIVFAEKDEELNKYILRQHQTGAVEAAVSRALDPQRTRGLVWHTQGSGKTFTMIKAAERLFRAPGADKPTVLLMID RNELEDQMLKNLAALGLGNLEHASSIARLNQLLRDDYRGIIVTMIHKFRDMPADLNTRSNIYVLIDEAHRTTGGDLGNFL MAGLPNATFIGFTGTPVDKTVYGKGTFKTFGCEDDQGYLHKYSIADSIEDGTTLPLYYQLAPNEMLVPHETLDKEFLSLA EAEGVADIEELNKILERAVNLKNFLKGKERIQHVAQFVAAHYRENVEPLGYKAFLVGVDREACAHYKRALDQFLPPEYSE VVYTGSNNDSKLLKEFHLDPKRERQIRKSFGKLDQMPKILIVTEKLLTGFDAPVLYAMYLDKPMRDHTLLQAIARVNRPY ENEVQEMVKPHGFVLDFVGIFDKLEKALAFDSDEINAIVKDLKLLKVLFKNKMESKAPDYLGLIERNFNDKDVDTLIEHF RDPERRKEFFKEYKEIEMLYEIISPDAFLRPFIADYGTLSAIYQVVRKAYTRTVMVDREFQAKTNHLVREQVGSYGVGGL GEIVAIDGNTIELIKNKRGGDGTKVINLIKSIERLAEEGSDDPYLIAMAERARAVQESFESRQTSTAEALAELLREVEGN ETRKKEQAEKSFDGLTYFVYRSLLDAKIQNAEAVSRKIRHAFTEFPNWKRSENALRELRKKVTFALFAETEDLDRVTAMV DELFTLLEKADRI
Sequences:
NA
Specific function: NA
COG id: COG0610
COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA