Definition Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome.
Accession NC_011206
Length 2,885,038

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 198282723

GI number:

Start: 541351

End: 543189

Strand: Reverse

Name: Not Available

Synonym: Lferr_0583

Alternate gene names: NA

Gene position: NA

Preceding gene: 198282732

Following gene: 198282722

Centisome position: NA

GC content: NA

Gene sequence:

>1839_bases
ATGAAGAAGCGAGTTCTCGCTATGGCCACGCTGGTGGCACTCGGCGGCATTCCTATGGCATGGGCGGATAGCCAAACCAT
AGGCCTGCAACAAGGTGACCTCCAGACCGGCGTAGCACAGGCCCTGAACGCCGGCGCGCAGAACGTGGACCTGCAAAGCG
GCGAACCGGTAGCGGGGCCGGTCGGCAACGTCTCCGGCCTGTCGGCCACCCTGCAGCAGTTCGAGGCATCGGGCGCCTTT
GGCAACCAGACGGGAGCCGGCAATGTCTGGACCCATATCGACGACGGCCTGCGCATCAGCGACGTCTCCCGCTTGGAAGT
GGATAAATGGCGTACCTGGTTCCTGCAACATCAGGGCAAGCTGGAACAGATCCTCGACAACTCCCGCCCCTTTCTGTATT
ACGTGGTGAACGCCGTTGCGGAACGCGGCATGCCCATGGAACTGGCGCTGCTGCCGGCCATCGAGAGCGGTTACAACCCC
AAGGCCTACTCCCCGGCGGCCGCGGCGGGCCTCTGGCAATTCATACCCGGCACCGCACGCAATTTCGGCCTGCAAAACAC
CCGCTATGGCGATCCCCGCCTGAGTCTCATCGCCTCCACCAACGCCGCCCTCGATTACCTCTCCTACCTCTACAACTATT
TCGGCGGCAACTGGCTCCTCGCCATCGCCTCCTACAACGCCGGGCAGGGTACCGTTTCCGCCGCTATCCAGCAGAATGTC
GCGGCGGGTAAGCCCACCGATTTCTGGGACCTCTCTCTGCCGCAGCAAACCGAAGACTACGTTGCCGAACTCCTCGCCCT
GGCGCAGGTCATCAAAAATGCCAAGGCCTACCATGTCTCCCTGCCCGCCATTCCCAACGCGGCACACATCGCGGTCGTGA
CCACGCCCAAATCCGTGGCCCTGAACGTGGCGGCGAACCTGATGAACATGCCGGTCAGCGAACTGCAGCACCTCAATGCC
GGGTTGAGCTACGGCGTCGCCCCGGCCGACTACCATCTGGTGGTGCCCAAAGACAAGGCCGCCACCCTGAAGAGCGCGCT
GCTGACCATGCCCCAGGAAGCCGCCGCTCAGCCCGTCGTTGCGCTGCGGCCAGCGCCCAGCCCGGCCTTCCGTCGCGTCA
TGCTTCGCCCCGGTGAGACGCTCTGGCATCTGGCGCAACGGGCCGGCGTCAGCGTCACCAATCTCGAGCGCTGGAATCAC
ATCCGTTCCGCGCGCGACCTGCAGGTCGGGCAACACCTGGTCGTCTACGGCGCCGGTGGATCCGGCCATCTGCAAAACGC
CGTCTATGCCCGGAGCCGGGCGCGGGCGCTCACCGTGCGTCCCGGCAACACGCCCTCCCAGCTCGCGCAGCGGGCCGGCG
TCAGCGTCAAGGACCTCATGCGCTGGAACCATATCCGTTCCGCGCGTGACCTGCAGATCGGTGAAACCCTGCATATCCCG
GGTGGCGGTGGTAGCAGGCCCGCACAGGTCTATACCGCCGCGCGCGGCAACCGGCGCCTCACCGTGCGGCCCGGTGAAAG
TCTTTGGCAAATCGCCCGGCGCGCCGGAGTGGGCGTCTCTCTGCTGGCCCGCGCCAACCATCTCACCGAACGGACCATCC
TCCATCCCGGACAGGTGCTGAACATCCCGGCACAAACCATGGTCGCCGCCATCAGCCGCCGGCAGGAACGCGCCGCCAGC
CGGGCGCGAACGACGACTTACGTGGTGCGTCCGGGCGACACGCTCTGGCAGATCGCCCAGCAGTTCCATGTCCAGCCCAA
GTCGCTGATTCAATGGAATCGCCTGGCCTCCGCCAGCGAAATTCAACCGGGCTCACGCCTCACCATTTATACGCGCTGA

Upstream 100 bases:

>100_bases
CAGCAAGCCTGATGCCAACCTCATGTTTACAATGATATCCTTGTATAAGGGATTATATCTGCGGGGCACCCCTTGTGGTT
CCGGCCCGCCAGGAGGGAGT

Downstream 100 bases:

>100_bases
TTATTCTGTCATAGGAGTTTTGCAATGGGTTTCATGGTAGGGAAAAAGGCGCTGATCGTCGGCGTGGCCAATGACCGCTC
CATCTGCTGGGGCATCGCCC

Product: Lytic transglycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>612_residues
MKKRVLAMATLVALGGIPMAWADSQTIGLQQGDLQTGVAQALNAGAQNVDLQSGEPVAGPVGNVSGLSATLQQFEASGAF
GNQTGAGNVWTHIDDGLRISDVSRLEVDKWRTWFLQHQGKLEQILDNSRPFLYYVVNAVAERGMPMELALLPAIESGYNP
KAYSPAAAAGLWQFIPGTARNFGLQNTRYGDPRLSLIASTNAALDYLSYLYNYFGGNWLLAIASYNAGQGTVSAAIQQNV
AAGKPTDFWDLSLPQQTEDYVAELLALAQVIKNAKAYHVSLPAIPNAAHIAVVTTPKSVALNVAANLMNMPVSELQHLNA
GLSYGVAPADYHLVVPKDKAATLKSALLTMPQEAAAQPVVALRPAPSPAFRRVMLRPGETLWHLAQRAGVSVTNLERWNH
IRSARDLQVGQHLVVYGAGGSGHLQNAVYARSRARALTVRPGNTPSQLAQRAGVSVKDLMRWNHIRSARDLQIGETLHIP
GGGGSRPAQVYTAARGNRRLTVRPGESLWQIARRAGVGVSLLARANHLTERTILHPGQVLNIPAQTMVAAISRRQERAAS
RARTTTYVVRPGDTLWQIAQQFHVQPKSLIQWNRLASASEIQPGSRLTIYTR

Sequences:
NA

Specific function: NA

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA