Definition Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome.
Accession NC_011206
Length 2,885,038

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Identifier: 198282406

GI number:

Start: 248675

End: 251104

Strand: Direct

Name: Not Available

Synonym: Lferr_0262

Alternate gene names: NA

Gene position: NA

Preceding gene: 198282405

Following gene: 198282407

Centisome position: NA

GC content: NA

Gene sequence:

>2430_bases
ATGGTAAACAGTATCCATGCTCCCAACTCCACCGTCTCAGACTATAAGATCCAGCGCCTCGCCCGGGGCGGCAGGCTCAA
GACGACGCTCGCCGGTGTTGCGGCGGGCGTTCTCGGTTACACGCTAGGCATATCCTATGTGGCTCGGGACGTGTTTCCCG
GCTACCAGTGGACCGATGATTTCATCCAGAAGGCGCATGCCTACATCGCATTGCCTTACGGCTGGCGTCTGTATGATCCA
CTGCCGTTCCTGCGCCCCATGATCCTGAACATCCATTATCCGGTGATTCATCAGGCATTCTATGACGCCGGTCTGCCGGC
CGTGGTGCTGGGCATGCTCACGGCGGGGATACTCGGGAAAAAGCACAAGGACGCGCAAAAAGCCGTCCTGGACAATCCTG
TGCATGGCTCAGCTCGTTGGGCGGGTAAGAGCGACGCGATCCGGGCGGCGCTCTTGCCCTCTCCCCCGCCAAAGACGGTA
ATGGACTCCCTGCGCCCCTGGCTTGGCTTGCACCCTGCGAAGGGCTTGCACCCTGCGAAGGGGCTCAAGGGAGATTCCGA
CTGGGTCCGCTGGCAAGAGCGGCGGGAAAAGCGGAAAAAGGAGGCCGCCGAATGGCGGAAGAAGAAGGCGGAGAAGGAGA
AGAAACGCCTGTCAGAGATCCCGGAACCGACGGTTTTTGACCGGTTCGACTCCCCCCATGTCTGCTATGTGGGAGCCTTC
GTCGAGAACGGGGTGGCCACTCCACTCCAGCACACCGGGGCGGAACACATCCTGGTCTTCGCCCCGACCCGATCGGGCAA
GGGCGTTGGCCTGGTTTTGCCCACATTGCTGGACGGCTGGATGGACTCGGTGGTCGTGCATGACATCAAGGGGGAAAACT
TCAACCTGACGGCGGGATACCGCAAGGCCATGGGCCACCACATCCTGAAGTTTTCACCAGGCTCGGTATCCGAAGAAGGT
TGTCACTTCAACCCGCTGGATGCGGTGCGTGTCGGAACCCAATACGAAGTCAAGGACGTGATGAACATTGCCACGATGAT
TGTGGACCCGGATGGCAAGGGCCTGAACGATCACTGGCAGAAAACAGGCTTTGCCCTGCTCACGTCCATCATCCTGCATG
TGCTCTACGCCATGCCGGACAAGACCCTGCGGGGCGTTGCCGCCTATCTCAACGATCCTACGCTGGAAAGCGTGGACGTA
GCCTTTGAGCGCATGATGCAGACGGAGCATGACCCGGATGAGCAATATGGCTGGAGGGACGGCAACGGCCAGTTCACCAA
AGTGCATCCGGTCATCGCGCAATCCGCGCGGGAGATGCTGAACAAGGCCGAGAATGAAAAATCGGGCGTCATTTCGACCA
TGATGAGCTTCCTGTCCCTCTACCGGGATCCCATCGTCGCGAAGTGGACCGAGTATTCGGACTTTCGCATTGCCGACCTT
CAGGACGCCGAACAACCCGTCTCTCTGTACCTGGTCACCAGTCCCGAAGACAAGAACCGGCTCAAGCCCCTCATTCGCCT
CGTGCTCAACCAGATTGCCTCCCAGTTCACCGCGGAAGAACGCCTGGAAGCGAAAGACGGGCGAATCGTCGCCAAGGGAA
AGCATCGGCTGCTCCTGCTGCTCGACGAGTTCCCGAGCCTGGGCAAGCTGGACGTCTTCCTGGACAGCATCGCCTTCCTC
GCAGGCTACAACGTCAAGCTGTACCTCATCACCCAGGACATTGCCCAGCTGGAAGATGAAGGCCACGGCTACGGCAAGGC
CGGGGCCAAGACCATCATCGGCAACTGCCACATCCGGGCGGCCTACGCGCCCAACCAGGTGGAGACGGCCAAGTGGATCT
CTGACATGCTGGGCACCCGTACCGTGACCATGGAAAACGACAACCAGAGTTTTGACGGCTCCCTGTTCGGTCAGAACAAG
GGCTATTCGACGAGCCTCAGCTACCAGTCCCGCCCCCTGCTGACGGCGGATGAGGTCATGACCTTGCGGGGACCGGAAAA
GGAAGGCTCCAATATCAAGACCCCGGGCGATATGCTGGTATTCGCGGCAGGCTTCCACCCCATTTATGGACAGCAGCTGC
TCTATTTCAAGAATCCGGAATGGCTCGATCGGGCATCCGTTCGGTGGCCAGAGAAGAGCGATTCCATCCCCGGAGCCAGG
AAAGACTACAAGGCCATTCTGGGTGAGTCGGGTGGAACGCTACCCATCCCCCATATCGAGAAAAAACCGGAAGGGCAGGA
TCCTGTCGAGGAAGTGAGCGAGGCTGAAAGGGCGGCATTGGCCGCGGCGGCTGGCGATCTGGACGCCGTGGCAGGAGAGA
AGCCCTTCGCTGGGTGCAAGCCCACGGGGGACGGGAAATATGACACGTCCGAGCGGGACGCGGAGAGATGCGTTATCGGG
GGGTTGATGGGGGATGACGGCGACGGATGA

Upstream 100 bases:

>100_bases
GGGCTTGCAGCCGACGGGCAGGCAAAATCGGTTCAGGCGGTAACCACCGGACCATCAGATGACTCCCACTCCTGGCCGGT
TCTCCCATAAGGATGCCAAG

Downstream 100 bases:

>100_bases
TGGTAGCACCGTCACTGCTGTAAGCGCCTGGCCTGCCAGCGTCCAATCCCGATCAAATTTCCAACTCACCGACCCCAAGC
GCTTTTGAAATGATCCTTTG

Product: TRAG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>809_residues
MVNSIHAPNSTVSDYKIQRLARGGRLKTTLAGVAAGVLGYTLGISYVARDVFPGYQWTDDFIQKAHAYIALPYGWRLYDP
LPFLRPMILNIHYPVIHQAFYDAGLPAVVLGMLTAGILGKKHKDAQKAVLDNPVHGSARWAGKSDAIRAALLPSPPPKTV
MDSLRPWLGLHPAKGLHPAKGLKGDSDWVRWQERREKRKKEAAEWRKKKAEKEKKRLSEIPEPTVFDRFDSPHVCYVGAF
VENGVATPLQHTGAEHILVFAPTRSGKGVGLVLPTLLDGWMDSVVVHDIKGENFNLTAGYRKAMGHHILKFSPGSVSEEG
CHFNPLDAVRVGTQYEVKDVMNIATMIVDPDGKGLNDHWQKTGFALLTSIILHVLYAMPDKTLRGVAAYLNDPTLESVDV
AFERMMQTEHDPDEQYGWRDGNGQFTKVHPVIAQSAREMLNKAENEKSGVISTMMSFLSLYRDPIVAKWTEYSDFRIADL
QDAEQPVSLYLVTSPEDKNRLKPLIRLVLNQIASQFTAEERLEAKDGRIVAKGKHRLLLLLDEFPSLGKLDVFLDSIAFL
AGYNVKLYLITQDIAQLEDEGHGYGKAGAKTIIGNCHIRAAYAPNQVETAKWISDMLGTRTVTMENDNQSFDGSLFGQNK
GYSTSLSYQSRPLLTADEVMTLRGPEKEGSNIKTPGDMLVFAAGFHPIYGQQLLYFKNPEWLDRASVRWPEKSDSIPGAR
KDYKAILGESGGTLPIPHIEKKPEGQDPVEEVSEAERAALAAAAGDLDAVAGEKPFAGCKPTGDGKYDTSERDAERCVIG
GLMGDDGDG

Sequences:
NA

Specific function: NA

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA