Definition Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome.
Accession NC_011206
Length 2,885,038

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Identifier: 198282156

GI number:

Start: 11449

End: 13872

Strand: Direct

Name: Not Available

Synonym: Lferr_0008

Alternate gene names: NA

Gene position: NA

Preceding gene: 198282155

Following gene: 198282157

Centisome position: NA

GC content: NA

Gene sequence:

>2424_bases
TTGGCAGTCCATGATCAATCGCGCTCCTTCGCGATACGGTTCGCCGCCGCGATCGTCGTCGCGCTGATCTTGATGGGTGC
GGCACAGAGGGCAATAGCTGGCGGTGGTGAGACGCTGCTGCTCTCCGTAGTGGTCAACGGCTACCATACGGGCAAGATTG
GCGAGTTTCGGTTGAACAAAGGCACGTTGCGCGCTCGGCCACAAGAGTTGCATGATCTTGGCTTCAAGGTTCCCAAGTCC
ATTCCGGTCGGGACGGATGGCCGCGTCGCCTTGTCCGAACTTCCCGACTTTGCTTGGCATATCGATCAGGCCACGCAGAC
GCTTTACGTCACGGTGGGCAGCAAACGGCTCTTGCCTCAACTCCTGCACACCGAAACAAGCCCTGCCAGCGAGCTTCCGG
TGCAAAGCGGCCTTGGGGCGACCCTCGACTACGATGTCACCGGCACTTCGGTCGCAGGCCAGAAACTGGGTGCCGGGCAA
TTCAACTTCCGGGCCTTCTCGCCTTGGGGTGTGGCAAGTTCGGGTCTGTTGGCCTATGTCGGCGGCGGCCCTCAGGGCCT
GGGAACAAACGCCGTAATACGCCTGAACAGCACCTATACCTATTCGGATCCGGAAACACTGCGCCGCTATCGCGTCGGGG
ACTTCATTACCGGTGGTTTGAGCTGGACCCGTCCGGTCCGCCTGGGTGGCATACAAATCAGCTCAGACTTCTCTATGCGA
CCTGATCTAATTACCTTCCCATTGCCCGGCGTCAGCGGAACCGTCGCCGTTCCCTCGACGGTCAACGTGCTGGTCAACGG
CATGCAGGTGCTTTCGAGCCAGGTGCGGCCCGGTCCCTTCGAGATCCCGCAGGTCCCGATGATCACTGGTGCCGGAACGG
TGGTGACGACGGTGACCAATGCGCTCGGGCAACAGGTCACTACGACCCTGCCGTTCTATGCCAGTGCGAATCTGCTTGCG
CCTGGACTGCAGACCTTCTCGGCCGGGCTTGGATTCGTGCGGCTCAACTGGGGTTTCCTCAGCAACGACTATGGCCCATT
GGCCGGATCCATAACCTTTCGCCGTGGCCTCACGGACGCGCTGACGGTGGAAGCCCATGCCGAAGGTACGCGGGGAGTGG
CCATGGCAGGCGGCGGTATCGTGGTGAATATCGACAATCGTGGCGTACTGAATCTTTCCGCCGCAGGCAGTACATCTCAA
GGGCACACCGGTGCGCAGTTCTCCGTCGGGGTCCAGCGCATCGGCCGTGTTTTCAGCGCTGGCGCCTCGGCGATCTTTGC
CGATCCCGACTTTCGCGATATAGCAGCAATGAACGGAGATCCGGTCCCGACGCGCCAGATCAGTGCCAACGTCGGTCTGT
CCCTCGGCCGTTTCGGCTCCTTTGGTATCAGCTATGCCGGTATCGACCGTAATGCCGCATCGATGCCAATCCCGGTATAC
GCTCCACCCGGAACCGTGGTGACGGAAGGCGGGGCGCCCGTAAGCGTATATTATTTCCTGCCTGCCGAACACGCTCATAT
CCTTTCGGCCAGCTATTCGCTGCAGATTGGCCCAGTATCGTTCTACGCCACGGGCTACCATGATTTCGCCAATAGTGGCG
ACAGTGGTGTGCAGATGGGAGTGACCATTCCGCTCGGCAGCCGGAGCTCGATCGGGGGTAGTCTGGCATCCTCTTCGGGA
AACGATTCCGCTCAGGTGCAGCTCATGCAGTCCCCGGTCACGATCGGGGACTGGGGCTATCAGGCCTACGCCACCACTGG
CCGGACCAGCCAGGAATTCGGCCAGTTGCAATACAAGTCGCCCTGGGGACTTGTTTCGGCGGGCGCCAGTCGGATCGACC
GGCAAACCCTGGTGCAGGGCGAGGTACGGGGCGCTCTTTCTTTTATGGATGGCGGATTGTTCGCGTCCAACACCATCAAC
AACAGCTTTGCCATCGTTGATACCGATGGTTTCGGAAATATTCGCGTCCTGGACGAGAATCGGTTGGTTGGGCGAACCGA
CTCGGCTGGACAACTGCTGGTTCCGGACCTGCGCTCTTACCAGGCCAACCATATCGCCATCGATCCCAATGATGTGCCGA
TCAATGCCACTCTACCCTATGCGACTCGCGACGTGCGCCCACCGGACCGGTCCGGTGTTGTCGTGAAGTTCCCCATACGG
GCGAGTTACGGCGCGCTGTTACGTCTAGTGGATCAATCGGGCAAGAATCTTCCGGTCGGTAGCGTCGCCACACTCCAGAA
AACCGGTGTCAGTGTCCCGGTCGGCTACGATGGTGAGGCCTACGTAGTCAACCTGAGCCCCCACAATCGGCTGCTTGTCG
AGCGGCCGGATGGGCAACGCTGCATCGTTACCTTTACGTATCATCCCATAGCCGGCACGATTCCATCGATTGGCCCCCTA
ACCTGCCGGAAGGACGGACCATGA

Upstream 100 bases:

>100_bases
TGGCACATCGTCACACCGTCCTCTCCACTGGCCCCTGGCGCAGTCCTGCAACTAACGGCACGCACCAATACCGGGCATAT
TGACCAGTCGGTCCGGGTTG

Downstream 100 bases:

>100_bases
AACGGAAGCTCGCTTTAGCCGCACTGCTGATTTTTGCGCCGACGGCGGTCGATGCGGCCTGCAGCGTTACCGCCACCGGC
GTTGCGTTCGGAACCTATGT

Product: fimbrial biogenesis outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>807_residues
MAVHDQSRSFAIRFAAAIVVALILMGAAQRAIAGGGETLLLSVVVNGYHTGKIGEFRLNKGTLRARPQELHDLGFKVPKS
IPVGTDGRVALSELPDFAWHIDQATQTLYVTVGSKRLLPQLLHTETSPASELPVQSGLGATLDYDVTGTSVAGQKLGAGQ
FNFRAFSPWGVASSGLLAYVGGGPQGLGTNAVIRLNSTYTYSDPETLRRYRVGDFITGGLSWTRPVRLGGIQISSDFSMR
PDLITFPLPGVSGTVAVPSTVNVLVNGMQVLSSQVRPGPFEIPQVPMITGAGTVVTTVTNALGQQVTTTLPFYASANLLA
PGLQTFSAGLGFVRLNWGFLSNDYGPLAGSITFRRGLTDALTVEAHAEGTRGVAMAGGGIVVNIDNRGVLNLSAAGSTSQ
GHTGAQFSVGVQRIGRVFSAGASAIFADPDFRDIAAMNGDPVPTRQISANVGLSLGRFGSFGISYAGIDRNAASMPIPVY
APPGTVVTEGGAPVSVYYFLPAEHAHILSASYSLQIGPVSFYATGYHDFANSGDSGVQMGVTIPLGSRSSIGGSLASSSG
NDSAQVQLMQSPVTIGDWGYQAYATTGRTSQEFGQLQYKSPWGLVSAGASRIDRQTLVQGEVRGALSFMDGGLFASNTIN
NSFAIVDTDGFGNIRVLDENRLVGRTDSAGQLLVPDLRSYQANHIAIDPNDVPINATLPYATRDVRPPDRSGVVVKFPIR
ASYGALLRLVDQSGKNLPVGSVATLQKTGVSVPVGYDGEAYVVNLSPHNRLLVERPDGQRCIVTFTYHPIAGTIPSIGPL
TCRKDGP

Sequences:
NA

Specific function: NA

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA