Definition | Acidithiobacillus ferrooxidans ATCC 53993 chromosome, complete genome. |
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Accession | NC_011206 |
Length | 2,885,038 |
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Identifier: 198282156
GI number:
Start: 11449
End: 13872
Strand: Direct
Name: Not Available
Synonym: Lferr_0008
Alternate gene names: NA
Gene position: NA
Preceding gene: 198282155
Following gene: 198282157
Centisome position: NA
GC content: NA
Gene sequence:
>2424_bases TTGGCAGTCCATGATCAATCGCGCTCCTTCGCGATACGGTTCGCCGCCGCGATCGTCGTCGCGCTGATCTTGATGGGTGC GGCACAGAGGGCAATAGCTGGCGGTGGTGAGACGCTGCTGCTCTCCGTAGTGGTCAACGGCTACCATACGGGCAAGATTG GCGAGTTTCGGTTGAACAAAGGCACGTTGCGCGCTCGGCCACAAGAGTTGCATGATCTTGGCTTCAAGGTTCCCAAGTCC ATTCCGGTCGGGACGGATGGCCGCGTCGCCTTGTCCGAACTTCCCGACTTTGCTTGGCATATCGATCAGGCCACGCAGAC GCTTTACGTCACGGTGGGCAGCAAACGGCTCTTGCCTCAACTCCTGCACACCGAAACAAGCCCTGCCAGCGAGCTTCCGG TGCAAAGCGGCCTTGGGGCGACCCTCGACTACGATGTCACCGGCACTTCGGTCGCAGGCCAGAAACTGGGTGCCGGGCAA TTCAACTTCCGGGCCTTCTCGCCTTGGGGTGTGGCAAGTTCGGGTCTGTTGGCCTATGTCGGCGGCGGCCCTCAGGGCCT GGGAACAAACGCCGTAATACGCCTGAACAGCACCTATACCTATTCGGATCCGGAAACACTGCGCCGCTATCGCGTCGGGG ACTTCATTACCGGTGGTTTGAGCTGGACCCGTCCGGTCCGCCTGGGTGGCATACAAATCAGCTCAGACTTCTCTATGCGA CCTGATCTAATTACCTTCCCATTGCCCGGCGTCAGCGGAACCGTCGCCGTTCCCTCGACGGTCAACGTGCTGGTCAACGG CATGCAGGTGCTTTCGAGCCAGGTGCGGCCCGGTCCCTTCGAGATCCCGCAGGTCCCGATGATCACTGGTGCCGGAACGG TGGTGACGACGGTGACCAATGCGCTCGGGCAACAGGTCACTACGACCCTGCCGTTCTATGCCAGTGCGAATCTGCTTGCG CCTGGACTGCAGACCTTCTCGGCCGGGCTTGGATTCGTGCGGCTCAACTGGGGTTTCCTCAGCAACGACTATGGCCCATT GGCCGGATCCATAACCTTTCGCCGTGGCCTCACGGACGCGCTGACGGTGGAAGCCCATGCCGAAGGTACGCGGGGAGTGG CCATGGCAGGCGGCGGTATCGTGGTGAATATCGACAATCGTGGCGTACTGAATCTTTCCGCCGCAGGCAGTACATCTCAA GGGCACACCGGTGCGCAGTTCTCCGTCGGGGTCCAGCGCATCGGCCGTGTTTTCAGCGCTGGCGCCTCGGCGATCTTTGC CGATCCCGACTTTCGCGATATAGCAGCAATGAACGGAGATCCGGTCCCGACGCGCCAGATCAGTGCCAACGTCGGTCTGT CCCTCGGCCGTTTCGGCTCCTTTGGTATCAGCTATGCCGGTATCGACCGTAATGCCGCATCGATGCCAATCCCGGTATAC GCTCCACCCGGAACCGTGGTGACGGAAGGCGGGGCGCCCGTAAGCGTATATTATTTCCTGCCTGCCGAACACGCTCATAT CCTTTCGGCCAGCTATTCGCTGCAGATTGGCCCAGTATCGTTCTACGCCACGGGCTACCATGATTTCGCCAATAGTGGCG ACAGTGGTGTGCAGATGGGAGTGACCATTCCGCTCGGCAGCCGGAGCTCGATCGGGGGTAGTCTGGCATCCTCTTCGGGA AACGATTCCGCTCAGGTGCAGCTCATGCAGTCCCCGGTCACGATCGGGGACTGGGGCTATCAGGCCTACGCCACCACTGG CCGGACCAGCCAGGAATTCGGCCAGTTGCAATACAAGTCGCCCTGGGGACTTGTTTCGGCGGGCGCCAGTCGGATCGACC GGCAAACCCTGGTGCAGGGCGAGGTACGGGGCGCTCTTTCTTTTATGGATGGCGGATTGTTCGCGTCCAACACCATCAAC AACAGCTTTGCCATCGTTGATACCGATGGTTTCGGAAATATTCGCGTCCTGGACGAGAATCGGTTGGTTGGGCGAACCGA CTCGGCTGGACAACTGCTGGTTCCGGACCTGCGCTCTTACCAGGCCAACCATATCGCCATCGATCCCAATGATGTGCCGA TCAATGCCACTCTACCCTATGCGACTCGCGACGTGCGCCCACCGGACCGGTCCGGTGTTGTCGTGAAGTTCCCCATACGG GCGAGTTACGGCGCGCTGTTACGTCTAGTGGATCAATCGGGCAAGAATCTTCCGGTCGGTAGCGTCGCCACACTCCAGAA AACCGGTGTCAGTGTCCCGGTCGGCTACGATGGTGAGGCCTACGTAGTCAACCTGAGCCCCCACAATCGGCTGCTTGTCG AGCGGCCGGATGGGCAACGCTGCATCGTTACCTTTACGTATCATCCCATAGCCGGCACGATTCCATCGATTGGCCCCCTA ACCTGCCGGAAGGACGGACCATGA
Upstream 100 bases:
>100_bases TGGCACATCGTCACACCGTCCTCTCCACTGGCCCCTGGCGCAGTCCTGCAACTAACGGCACGCACCAATACCGGGCATAT TGACCAGTCGGTCCGGGTTG
Downstream 100 bases:
>100_bases AACGGAAGCTCGCTTTAGCCGCACTGCTGATTTTTGCGCCGACGGCGGTCGATGCGGCCTGCAGCGTTACCGCCACCGGC GTTGCGTTCGGAACCTATGT
Product: fimbrial biogenesis outer membrane usher protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>807_residues MAVHDQSRSFAIRFAAAIVVALILMGAAQRAIAGGGETLLLSVVVNGYHTGKIGEFRLNKGTLRARPQELHDLGFKVPKS IPVGTDGRVALSELPDFAWHIDQATQTLYVTVGSKRLLPQLLHTETSPASELPVQSGLGATLDYDVTGTSVAGQKLGAGQ FNFRAFSPWGVASSGLLAYVGGGPQGLGTNAVIRLNSTYTYSDPETLRRYRVGDFITGGLSWTRPVRLGGIQISSDFSMR PDLITFPLPGVSGTVAVPSTVNVLVNGMQVLSSQVRPGPFEIPQVPMITGAGTVVTTVTNALGQQVTTTLPFYASANLLA PGLQTFSAGLGFVRLNWGFLSNDYGPLAGSITFRRGLTDALTVEAHAEGTRGVAMAGGGIVVNIDNRGVLNLSAAGSTSQ GHTGAQFSVGVQRIGRVFSAGASAIFADPDFRDIAAMNGDPVPTRQISANVGLSLGRFGSFGISYAGIDRNAASMPIPVY APPGTVVTEGGAPVSVYYFLPAEHAHILSASYSLQIGPVSFYATGYHDFANSGDSGVQMGVTIPLGSRSSIGGSLASSSG NDSAQVQLMQSPVTIGDWGYQAYATTGRTSQEFGQLQYKSPWGLVSAGASRIDRQTLVQGEVRGALSFMDGGLFASNTIN NSFAIVDTDGFGNIRVLDENRLVGRTDSAGQLLVPDLRSYQANHIAIDPNDVPINATLPYATRDVRPPDRSGVVVKFPIR ASYGALLRLVDQSGKNLPVGSVATLQKTGVSVPVGYDGEAYVVNLSPHNRLLVERPDGQRCIVTFTYHPIAGTIPSIGPL TCRKDGP
Sequences:
NA
Specific function: NA
COG id: COG3188
COG function: function code NU; P pilus assembly protein, porin PapC
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA