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The map label for this gene is yhjL [C]

Identifier: 197120080

GI number: 197120080

Start: 4244134

End: 4245351

Strand: Direct

Name: yhjL [C]

Synonym: Gbem_3719

Alternate gene names: 197120080

Gene position: 4244134-4245351 (Clockwise)

Preceding gene: 197120079

Following gene: 197120081

Centisome position: 91.96

GC content: 63.14

Gene sequence:

>1218_bases
ATGGCAACGCAGAGAACGGCATGGGACTACATGGACGACATGTTCAGCACCCTCGCCTCGCAGGACTCACAGCGGGCGCA
GCTGGCCAACGGAGCCTTGAGCTCGGGCCTTGGGTACTACCAGAAGAAGGATTACGCCCGCGCCACGGGCGAGCTGAAGC
GCGCCATCTCCATGGACCCCACCAACACCCAGGCCTACAAGTTCCTGGCCAGCGCGTATCAGGCACAGGGGAAGACCGAC
GAGGCGATCAAGACCTACAAGAACTCGCTGGCGCTCGACCCGACCCAGGACTCCATACACACGAACCTCGGCAACATCTA
CCTGCAGCAGAAGAAGTACAACCTGGCCGAGAGGGAGTTCAAGGACGCCGCCAAGCTGAACCCCACCGACACCCTCGCCC
CCTATACGCTCGGGCAGCTCTACGTGCAGACCGAACGCTACGGCGAGGCGGAGACCCAGTTCAAGAAGGTCTCCAGGATG
GCCCCCACCGACCCTAACCCTTACTATTCCCTAGGCGCGGTCTACAACAAGGAAGGGAAATACGCCGACGCGGTGAAGCA
GCTTACGCAGGCCGTGAAACTGCGCCCCAAGATGGAGGCGGCGCATTTCGAACTGGGCGTCGCCTATGCCGCCTTGGGCG
ACACCACCAACGCACAGAAAGAGGTCAACACCCTCACCACGCTGAACTCGACTCAAGGGGCCCTGCTCAAGCTGACCATC
GCCCAGCCGCAGATGATCGCGGCCGGCGGCGAGGACGACACCTTCCTGCCGGCCAAGCAGACCCCGAGCACCAACCCCCA
GCCGGGCGACAACCCATACCTGCTGAGCCTGCTGGACGTAGTCGACCTATCGGCGGCGAACTCCTCGAAGGTGCTCAGCA
TGACCTTCTACTTCGACTCCGCCATGGACGCCGCTTCCGTGCAGGACACCAGCAACTGGACCATCACCAAGGCGACGGGC
GGGGCGGCCGGGTACTACAACAACCTGCTGCCGATACTCCCCACAGAGGCGTACATCCCGCAAAACCCGCTCAGCGTGAC
CTACGACCCCGAGAAGCGGACCGCGACGGTCAACTTCATGCTGAGCCAGAACGACACCGGCGACGCGACCATCGACTCCG
CGCACATGGTTTTCAAGTTCTCCGGCACCGACGCCAGGGGGAAGGTCATGGACCCTGCAGCCGACGAGTTCGACGCCGCG
GCGGAAGGGCCTTTCTGA

Upstream 100 bases:

>100_bases
GCATCGTCACGGCCGGCTCCCCGGGGTGCTTTTTCACTAAAGTTTTCCCCCTGGGATGCCGATAAGTGACTCGGCTCAAG
AGCCTTTCGCGGAGGTAGTT

Downstream 100 bases:

>100_bases
CCGTTCGCCCGCTGGCTCAATCAAACTGGCTGGCAGCATATCCCTACCGCTTCGAGCGCAGGTCCCGCACCGGCACCTTG
GGCTTGGGGCTGCCGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Peptidase; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; TPR Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; O-GlcNAc Transferase; Sulfotransferase; O-Linked GlcNAc Transferase; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; TPR Repeats Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; O-Linked N-Acetylglucosamine Transferase; Glycosyl Transferase Family Protein; TPR Repeat; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Type II Secretion System; TPR Repeat- And Protein Kinase Domain-Containing Protein; TPR Domain Containing Protein; TPR Repeat-Containing Methyltransferase; Tfp Pilus Assembly Protein PilF-Like; Porphyrin Biosynthesis Protein; Tetratricopeptide Domain Protein; Polypeptide N-Acetylglucosaminyltransferase; TPR Repeat-Containing O-Linked GlcNAc Transferase; Protein Kinase; Social Gliding Motility Protein Tgl; TPR-Repeat-Containing Protein; Methyltransferase Type; O-Linked GlcNAc Transferase Protein; Peptidase S1 And S6 Chymotrypsin/Hap; PDZ/DHR/GLGF Domain Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Glycosyl Transferase

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MATQRTAWDYMDDMFSTLASQDSQRAQLANGALSSGLGYYQKKDYARATGELKRAISMDPTNTQAYKFLASAYQAQGKTD
EAIKTYKNSLALDPTQDSIHTNLGNIYLQQKKYNLAEREFKDAAKLNPTDTLAPYTLGQLYVQTERYGEAETQFKKVSRM
APTDPNPYYSLGAVYNKEGKYADAVKQLTQAVKLRPKMEAAHFELGVAYAALGDTTNAQKEVNTLTTLNSTQGALLKLTI
AQPQMIAAGGEDDTFLPAKQTPSTNPQPGDNPYLLSLLDVVDLSAANSSKVLSMTFYFDSAMDAASVQDTSNWTITKATG
GAAGYYNNLLPILPTEAYIPQNPLSVTYDPEKRTATVNFMLSQNDTGDATIDSAHMVFKFSGTDARGKVMDPAADEFDAA
AEGPF

Sequences:

>Translated_405_residues
MATQRTAWDYMDDMFSTLASQDSQRAQLANGALSSGLGYYQKKDYARATGELKRAISMDPTNTQAYKFLASAYQAQGKTD
EAIKTYKNSLALDPTQDSIHTNLGNIYLQQKKYNLAEREFKDAAKLNPTDTLAPYTLGQLYVQTERYGEAETQFKKVSRM
APTDPNPYYSLGAVYNKEGKYADAVKQLTQAVKLRPKMEAAHFELGVAYAALGDTTNAQKEVNTLTTLNSTQGALLKLTI
AQPQMIAAGGEDDTFLPAKQTPSTNPQPGDNPYLLSLLDVVDLSAANSSKVLSMTFYFDSAMDAASVQDTSNWTITKATG
GAAGYYNNLLPILPTEAYIPQNPLSVTYDPEKRTATVNFMLSQNDTGDATIDSAHMVFKFSGTDARGKVMDPAADEFDAA
AEGPF
>Mature_404_residues
ATQRTAWDYMDDMFSTLASQDSQRAQLANGALSSGLGYYQKKDYARATGELKRAISMDPTNTQAYKFLASAYQAQGKTDE
AIKTYKNSLALDPTQDSIHTNLGNIYLQQKKYNLAEREFKDAAKLNPTDTLAPYTLGQLYVQTERYGEAETQFKKVSRMA
PTDPNPYYSLGAVYNKEGKYADAVKQLTQAVKLRPKMEAAHFELGVAYAALGDTTNAQKEVNTLTTLNSTQGALLKLTIA
QPQMIAAGGEDDTFLPAKQTPSTNPQPGDNPYLLSLLDVVDLSAANSSKVLSMTFYFDSAMDAASVQDTSNWTITKATGG
AAGYYNNLLPILPTEAYIPQNPLSVTYDPEKRTATVNFMLSQNDTGDATIDSAHMVFKFSGTDARGKVMDPAADEFDAAA
EGPF

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI167466177, Length=212, Percent_Identity=23.5849056603774, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI167466175, Length=212, Percent_Identity=23.5849056603774, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI32307148, Length=206, Percent_Identity=25.2427184466019, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI32307150, Length=206, Percent_Identity=25.2427184466019, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=190, Percent_Identity=27.3684210526316, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=191, Percent_Identity=24.0837696335079, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6319387, Length=145, Percent_Identity=28.2758620689655, Blast_Score=73, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24659892, Length=180, Percent_Identity=23.8888888888889, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44171; Mature: 44039

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQRTAWDYMDDMFSTLASQDSQRAQLANGALSSGLGYYQKKDYARATGELKRAISMDP
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
TNTQAYKFLASAYQAQGKTDEAIKTYKNSLALDPTQDSIHTNLGNIYLQQKKYNLAEREF
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEHHHCCHHHHHH
KDAAKLNPTDTLAPYTLGQLYVQTERYGEAETQFKKVSRMAPTDPNPYYSLGAVYNKEGK
HHHHCCCCCCCCCCHHHHHEEEEHHHCCCHHHHHHHHHHCCCCCCCCCEEECEEECCCCC
YADAVKQLTQAVKLRPKMEAAHFELGVAYAALGDTTNAQKEVNTLTTLNSTQGALLKLTI
HHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCHHHHHHHHEECCCCCEEEEEEE
AQPQMIAAGGEDDTFLPAKQTPSTNPQPGDNPYLLSLLDVVDLSAANSSKVLSMTFYFDS
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECC
AMDAASVQDTSNWTITKATGGAAGYYNNLLPILPTEAYIPQNPLSVTYDPEKRTATVNFM
CCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEE
LSQNDTGDATIDSAHMVFKFSGTDARGKVMDPAADEFDAAAEGPF
EECCCCCCCEECCEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure 
ATQRTAWDYMDDMFSTLASQDSQRAQLANGALSSGLGYYQKKDYARATGELKRAISMDP
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
TNTQAYKFLASAYQAQGKTDEAIKTYKNSLALDPTQDSIHTNLGNIYLQQKKYNLAEREF
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEHHHCCHHHHHH
KDAAKLNPTDTLAPYTLGQLYVQTERYGEAETQFKKVSRMAPTDPNPYYSLGAVYNKEGK
HHHHCCCCCCCCCCHHHHHEEEEHHHCCCHHHHHHHHHHCCCCCCCCCEEECEEECCCCC
YADAVKQLTQAVKLRPKMEAAHFELGVAYAALGDTTNAQKEVNTLTTLNSTQGALLKLTI
HHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCHHHHHHHHEECCCCCEEEEEEE
AQPQMIAAGGEDDTFLPAKQTPSTNPQPGDNPYLLSLLDVVDLSAANSSKVLSMTFYFDS
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECC
AMDAASVQDTSNWTITKATGGAAGYYNNLLPILPTEAYIPQNPLSVTYDPEKRTATVNFM
CCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEE
LSQNDTGDATIDSAHMVFKFSGTDARGKVMDPAADEFDAAAEGPF
EECCCCCCCEECCEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA