| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is pgpA [H]
Identifier: 197119988
GI number: 197119988
Start: 4147764
End: 4148213
Strand: Direct
Name: pgpA [H]
Synonym: Gbem_3627
Alternate gene names: 197119988
Gene position: 4147764-4148213 (Clockwise)
Preceding gene: 197119987
Following gene: 197119989
Centisome position: 89.87
GC content: 64.22
Gene sequence:
>450_bases ATGAAACGCTTCGTCATCATTTCGGCAACCTGGTTCGGCACCGGCTTTTCCCCGTTCGCCTCGGGGACCGTGGGTACCCT CGGGGCGATACCGTTTTTCCTCCTCCTGTCGCGTATGCCGCTTGCGCTCTACCTGTTGACCTTGGTCGCCTTCACCCTCT TCGCCTGCTGGAGCGCCGGCTTCGGCGAGGAACTCTGGGGCGAGCACGACTCCGGCAAGATAGTGATCGACGAGGTGGCC GGGTATCTCGTCACCATGATCGCCGTCCCCCCCACCTGGCAGGGGGTGCTGATCGGGTTCCTGGCCTTCCGCTTCTTCGA CATCCTGAAGCCGCAGCCGGCGCGCTGGTTCGACCGGTCGCTCAAAAACGGCTACGGGGTGGTGCTCGACGACGTCATGG CGGGGCTCTACGCCTGCGCGACGACGCACCTGGCCCTGAGGTTCCTATGA
Upstream 100 bases:
>100_bases GCGTGACGCCGGAGTACGACTCCTGCCGCAGAATCGCGCTGGAGAAGGGAATCCCGCTCATCGAGGTGTACCGCACCGTG GAAAGGGAGTGCGGTCAGGC
Downstream 100 bases:
>100_bases GGGTGGCGGTTCTTTCCATAGGGGACGAGCTTCTCTCCGGCGAGGTGGTGGACACCAACGCAAGCCACATCGCCGACCGG CTCTTCCAGGCGGGGGGGCG
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKRFVIISATWFGTGFSPFASGTVGTLGAIPFFLLLSRMPLALYLLTLVAFTLFACWSAGFGEELWGEHDSGKIVIDEVA GYLVTMIAVPPTWQGVLIGFLAFRFFDILKPQPARWFDRSLKNGYGVVLDDVMAGLYACATTHLALRFL
Sequences:
>Translated_149_residues MKRFVIISATWFGTGFSPFASGTVGTLGAIPFFLLLSRMPLALYLLTLVAFTLFACWSAGFGEELWGEHDSGKIVIDEVA GYLVTMIAVPPTWQGVLIGFLAFRFFDILKPQPARWFDRSLKNGYGVVLDDVMAGLYACATTHLALRFL >Mature_149_residues MKRFVIISATWFGTGFSPFASGTVGTLGAIPFFLLLSRMPLALYLLTLVAFTLFACWSAGFGEELWGEHDSGKIVIDEVA GYLVTMIAVPPTWQGVLIGFLAFRFFDILKPQPARWFDRSLKNGYGVVLDDVMAGLYACATTHLALRFL
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=130, Percent_Identity=40, Blast_Score=103, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 16437; Mature: 16437
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFVIISATWFGTGFSPFASGTVGTLGAIPFFLLLSRMPLALYLLTLVAFTLFACWSAG CCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC FGEELWGEHDSGKIVIDEVAGYLVTMIAVPPTWQGVLIGFLAFRFFDILKPQPARWFDRS CCHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH LKNGYGVVLDDVMAGLYACATTHLALRFL HCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRFVIISATWFGTGFSPFASGTVGTLGAIPFFLLLSRMPLALYLLTLVAFTLFACWSAG CCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC FGEELWGEHDSGKIVIDEVAGYLVTMIAVPPTWQGVLIGFLAFRFFDILKPQPARWFDRS CCHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH LKNGYGVVLDDVMAGLYACATTHLALRFL HCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]