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The map label for this gene is yciA [C]

Identifier: 197119960

GI number: 197119960

Start: 4117491

End: 4118546

Strand: Direct

Name: yciA [C]

Synonym: Gbem_3599

Alternate gene names: 197119960

Gene position: 4117491-4118546 (Clockwise)

Preceding gene: 197119959

Following gene: 197119962

Centisome position: 89.22

GC content: 59.66

Gene sequence:

>1056_bases
GTGAGCGATGAAACGAATAAAAATGAGGTCCTCCAACTGACACCTCACGAAACACGCTACCTGTTCGTGCTCCCCTTCTC
GACGGACCGGGTGCTGGCACGGCGCTTTCTGGCCAAGGACGGCGACATGCCGGGGAATATAAGATTCGGGAAGCTTCTCG
AAGTACTGGACAAGGTCGCCGAAAACACGGCGCTCGGGTACGTGAACCAGTTCTATCCCGACGCACGGGTGGTGACCGCC
GCCATAGACAACATCGTGGTGAGAAACCCAGCCGACACCACGCATGATCTTGTTTTTTCGGCGCAGATAAACCATGTGGG
GAAATCTTCGATGGAGGTGGGGATCCGGGTTGAGTGCCTGGGGACCTGTTCAAGCCACCTGGCGAGCTGCTACTTCACCA
TGGTAGCCCGCTCGGCGGACAGCAAAGAAGCAAAGAGCCTGACGCTCCCCCCGCTCGACTACAGGCAGCCGGTAGAGCAG
AAAAGGCACCAAAAGGCAGAGCAGCGGCGCCAGGCGTACCGGGAAAGTCTGGTGAAGGCCGAGGAAATGCCCTCCCTGGA
GGAGTACCTCCTGCTGAAAAAGCTGCACAAGGAACAGGAGTCTGTCGACTTCGACGGCGTTCGCGCCGGGTCGCTCGTGC
TGGAAAGCGCCCTTCGGGCCTATCCCGAGCAGGAGAACGTGCCGAAGACGATCTTCGGCGGGTACCTGACCCGCAAGGCC
TACGAGCTCGCCGCCCTCGCCGCCGAAATGGTGACTCCGAACCGGGTGGTCCCCTGCCAGGTGAACCGCATCAACTTCAA
CCAGCCGGTGCTTCTGGGGGACCAGTTGAAGTTCACCGCCCGGGTGGTTTTCACCGGGAAGACCACCATCACCGTGCAGT
CCGACATAGAACGCTTCAGCCGCGACGCCCACAACAAGGCCCTTTCCAATTCATGCCTCTTCACCTTCCGCAACGTCGGC
AACGAGATGGAACCAATGACCGTACCTTTCATCTACCCGGTCACCTACGCGGAGGATGCCAGGTTCCTGAACGCCTACCG
GCAGAGAGTGGATTGA

Upstream 100 bases:

>100_bases
AATGGATAATTGTCTATGACAGTGCGCCTGAAATGCTAACAGCTTAAACTTGTGGTACCTTCTATGGATCTTGCTACCTG
CGAAAAGGATGGTGACTAGA

Downstream 100 bases:

>100_bases
ACGCCAGCCGCTCCCCCGGTTACAGCTTGAACTGATGCACCAACCTCTGCAGCTCTTCGGCTTGCCTGGCTACCCCGGTG
GCGGCTTTAGCGGCCTCGTC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Acyl-CoA Thioester Hydrolase; Acyl-CoA Hydrolase; Thioesterase Superfamily; Acyl-CoA Thioester Hydrolase-Related Protein; Acy-CoA Thioester Hydrolase-Related Protein; Long-Chain Acyl-CoA Thioester Hydrolase Family Protein; Acyl-Coa Hydrolase; Acyl-Coa Thioester Hydrolase Protein; Thioesterase Family Protein; Acyl CoA Thioester Hydrolase

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSDETNKNEVLQLTPHETRYLFVLPFSTDRVLARRFLAKDGDMPGNIRFGKLLEVLDKVAENTALGYVNQFYPDARVVTA
AIDNIVVRNPADTTHDLVFSAQINHVGKSSMEVGIRVECLGTCSSHLASCYFTMVARSADSKEAKSLTLPPLDYRQPVEQ
KRHQKAEQRRQAYRESLVKAEEMPSLEEYLLLKKLHKEQESVDFDGVRAGSLVLESALRAYPEQENVPKTIFGGYLTRKA
YELAALAAEMVTPNRVVPCQVNRINFNQPVLLGDQLKFTARVVFTGKTTITVQSDIERFSRDAHNKALSNSCLFTFRNVG
NEMEPMTVPFIYPVTYAEDARFLNAYRQRVD

Sequences:

>Translated_351_residues
MSDETNKNEVLQLTPHETRYLFVLPFSTDRVLARRFLAKDGDMPGNIRFGKLLEVLDKVAENTALGYVNQFYPDARVVTA
AIDNIVVRNPADTTHDLVFSAQINHVGKSSMEVGIRVECLGTCSSHLASCYFTMVARSADSKEAKSLTLPPLDYRQPVEQ
KRHQKAEQRRQAYRESLVKAEEMPSLEEYLLLKKLHKEQESVDFDGVRAGSLVLESALRAYPEQENVPKTIFGGYLTRKA
YELAALAAEMVTPNRVVPCQVNRINFNQPVLLGDQLKFTARVVFTGKTTITVQSDIERFSRDAHNKALSNSCLFTFRNVG
NEMEPMTVPFIYPVTYAEDARFLNAYRQRVD
>Mature_350_residues
SDETNKNEVLQLTPHETRYLFVLPFSTDRVLARRFLAKDGDMPGNIRFGKLLEVLDKVAENTALGYVNQFYPDARVVTAA
IDNIVVRNPADTTHDLVFSAQINHVGKSSMEVGIRVECLGTCSSHLASCYFTMVARSADSKEAKSLTLPPLDYRQPVEQK
RHQKAEQRRQAYRESLVKAEEMPSLEEYLLLKKLHKEQESVDFDGVRAGSLVLESALRAYPEQENVPKTIFGGYLTRKAY
ELAALAAEMVTPNRVVPCQVNRINFNQPVLLGDQLKFTARVVFTGKTTITVQSDIERFSRDAHNKALSNSCLFTFRNVGN
EMEPMTVPFIYPVTYAEDARFLNAYRQRVD

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI81295407, Length=345, Percent_Identity=28.4057971014493, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI81295404, Length=345, Percent_Identity=28.4057971014493, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI22165400, Length=295, Percent_Identity=25.7627118644068, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI22165355, Length=295, Percent_Identity=25.7627118644068, Blast_Score=66, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI32564577, Length=366, Percent_Identity=26.5027322404372, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17561564, Length=388, Percent_Identity=26.5463917525773, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI32564579, Length=293, Percent_Identity=26.6211604095563, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28571955, Length=361, Percent_Identity=24.6537396121884, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI161079406, Length=354, Percent_Identity=26.271186440678, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21357159, Length=316, Percent_Identity=23.7341772151899, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24582281, Length=352, Percent_Identity=22.1590909090909, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.2.- [C]

Molecular weight: Translated: 39738; Mature: 39607

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDETNKNEVLQLTPHETRYLFVLPFSTDRVLARRFLAKDGDMPGNIRFGKLLEVLDKVA
CCCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
ENTALGYVNQFYPDARVVTAAIDNIVVRNPADTTHDLVFSAQINHVGKSSMEVGIRVECL
HHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCHHHEEEEEHHHHCCCCCCEECEEEEEE
GTCSSHLASCYFTMVARSADSKEAKSLTLPPLDYRQPVEQKRHQKAEQRRQAYRESLVKA
HHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EEMPSLEEYLLLKKLHKEQESVDFDGVRAGSLVLESALRAYPEQENVPKTIFGGYLTRKA
HCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
YELAALAAEMVTPNRVVPCQVNRINFNQPVLLGDQLKFTARVVFTGKTTITVQSDIERFS
HHHHHHHHHHCCCCCEEEEEECEECCCCCEEECCCCEEEEEEEEECCEEEEEHHHHHHHH
RDAHNKALSNSCLFTFRNVGNEMEPMTVPFIYPVTYAEDARFLNAYRQRVD
HHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDETNKNEVLQLTPHETRYLFVLPFSTDRVLARRFLAKDGDMPGNIRFGKLLEVLDKVA
CCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
ENTALGYVNQFYPDARVVTAAIDNIVVRNPADTTHDLVFSAQINHVGKSSMEVGIRVECL
HHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCHHHEEEEEHHHHCCCCCCEECEEEEEE
GTCSSHLASCYFTMVARSADSKEAKSLTLPPLDYRQPVEQKRHQKAEQRRQAYRESLVKA
HHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EEMPSLEEYLLLKKLHKEQESVDFDGVRAGSLVLESALRAYPEQENVPKTIFGGYLTRKA
HCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
YELAALAAEMVTPNRVVPCQVNRINFNQPVLLGDQLKFTARVVFTGKTTITVQSDIERFS
HHHHHHHHHHCCCCCEEEEEECEECCCCCEEECCCCEEEEEEEEECCEEEEEHHHHHHHH
RDAHNKALSNSCLFTFRNVGNEMEPMTVPFIYPVTYAEDARFLNAYRQRVD
HHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA