| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119947
Identifier: 197119947
GI number: 197119947
Start: 4103110
End: 4103598
Strand: Direct
Name: 197119947
Synonym: Gbem_3586
Alternate gene names: NA
Gene position: 4103110-4103598 (Clockwise)
Preceding gene: 197119946
Following gene: 197119948
Centisome position: 88.91
GC content: 53.37
Gene sequence:
>489_bases ATGATCCGCCGCATCCTCAACCATTTCTCAGTGTATATCACTCCTTTTTTACTCGCTTCGCTGGGGATGGCTGCCAATAT AAAGCCGGATAAGGTTGGGCCGAAAGACAGGTGCCCGGTCTGTGGGATGTTCGTAGCCAGATATCTCGACTTTGCCGCCC AAGTCAAATTCGAAGACGGCCAAGTGTTTCATTTCGACGGCGCAAAGGATATGTTTACCTTCTACCTGGACATCCCTCGT TATGCTCCCGGCAGGCAGATGTCCGACGTCACCTACATCTTTGTCACCAACTATTACGAGCTCAACCTAATCGACGGGAA AAAGGCCCTGTACGTCGCAGGCAGCGACGTCTATGGCCCGATGGGACACGAACTGATACCCTTTGCCCACCGGCCGGAAG CCGAAGACTTTCTGAAGGACCATGAGGGAAAGCATCTGTTCCGGTTTCAGGATGTGACGCCGGCGGCACTCTCCAAGCTT GAGCGATGA
Upstream 100 bases:
>100_bases ATGACTCCGTCAGCGCTGCTTATCTCGACATGTACAAAGACACGAAGGCGATCAGGGAACGGCACAAAGCAAAGCATCGG GGCAGCAGCGGGGGGCCCAG
Downstream 100 bases:
>100_bases CTCAACGAAAGTCCGCACTTTTTGCCTGGGTGGTTGCCTTGCTTTCCTTTACCCTGGCAGGACTGCTCATCCACGCGCAG CATAAAGTCGGTTCCGCGTC
Product: NosL family protein
Products: NA
Alternate protein names: NosL Protein; Lipoprotein Involved In Nitrous Oxide Reduction
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MIRRILNHFSVYITPFLLASLGMAANIKPDKVGPKDRCPVCGMFVARYLDFAAQVKFEDGQVFHFDGAKDMFTFYLDIPR YAPGRQMSDVTYIFVTNYYELNLIDGKKALYVAGSDVYGPMGHELIPFAHRPEAEDFLKDHEGKHLFRFQDVTPAALSKL ER
Sequences:
>Translated_162_residues MIRRILNHFSVYITPFLLASLGMAANIKPDKVGPKDRCPVCGMFVARYLDFAAQVKFEDGQVFHFDGAKDMFTFYLDIPR YAPGRQMSDVTYIFVTNYYELNLIDGKKALYVAGSDVYGPMGHELIPFAHRPEAEDFLKDHEGKHLFRFQDVTPAALSKL ER >Mature_162_residues MIRRILNHFSVYITPFLLASLGMAANIKPDKVGPKDRCPVCGMFVARYLDFAAQVKFEDGQVFHFDGAKDMFTFYLDIPR YAPGRQMSDVTYIFVTNYYELNLIDGKKALYVAGSDVYGPMGHELIPFAHRPEAEDFLKDHEGKHLFRFQDVTPAALSKL ER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18535; Mature: 18535
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRILNHFSVYITPFLLASLGMAANIKPDKVGPKDRCPVCGMFVARYLDFAAQVKFEDG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCC QVFHFDGAKDMFTFYLDIPRYAPGRQMSDVTYIFVTNYYELNLIDGKKALYVAGSDVYGP CEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEEEECEEEEEEECCCEEEEEECCCCCCC MGHELIPFAHRPEAEDFLKDHEGKHLFRFQDVTPAALSKLER CCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHCCC >Mature Secondary Structure MIRRILNHFSVYITPFLLASLGMAANIKPDKVGPKDRCPVCGMFVARYLDFAAQVKFEDG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCC QVFHFDGAKDMFTFYLDIPRYAPGRQMSDVTYIFVTNYYELNLIDGKKALYVAGSDVYGP CEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEEEECEEEEEEECCCEEEEEECCCCCCC MGHELIPFAHRPEAEDFLKDHEGKHLFRFQDVTPAALSKLER CCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA