| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yaaT [H]
Identifier: 197119574
GI number: 197119574
Start: 3696276
End: 3697214
Strand: Direct
Name: yaaT [H]
Synonym: Gbem_3206
Alternate gene names: 197119574
Gene position: 3696276-3697214 (Clockwise)
Preceding gene: 197119573
Following gene: 197119575
Centisome position: 80.09
GC content: 61.34
Gene sequence:
>939_bases TTGGCTAAGATCGCAAGGATACAATTCAACACAGCAGGCAAGCTCTACGACTTCACCCTCGGCAAGACCACGGTCAAGCC GGGCGACCGGGTCATCGTCGAGACCGAGCGCGGCAAGAGCATAGGGCAGGTCGTTGCCGGCCCCATCGAAGTGGACGACG CGCTGGTGCCGGAAGGAATCAAACCGGTTCAACGCCTGGCGGAGGCCAGCGACCTGGCGACGCTGGCGACCAACACGGCA AAAGAGAAAGAGGCGCACAAGTTCTGCCTGACCCGGATCAAGGAACGGGGCATGGACATGAAGCTGGTGCGGGTCGAGTA CCTATTCGACGGCAGCAAGGCGATCTTCTACTTCACGGCCGACGGCCGGGTCGATTTTCGCGAACTGGTCAAGGACTTGG CGCATGCCTTCCACACCAGGATCGAGATGCGCCAGATAGGCGTCAGGGACGAGTCGAAGATGGTCGGCGGCATCGGGATC TGCGGGCGCGAACTCTGCTGCTCCTCCTACCTGCGCGAGTTCGAGCCGGTCTCGGTGAAGATGGCCAAGGAGCAGAACCT GGCGCTCAACCCGAGCAAGATCTCCGGGCAGTGCGGCAGGCTTCTTTGCTGCCTCTCCTACGAGTTCGACACCTACTGCA GCCTGAGAAAGGGGCTCCCCAAGTGCGGCAAAAGGGTCCAGTGCGGCTGCGTCGACGGCGAAGTGGTGAAGGTGAACGTG CTGCAGCAGACCGTCACCGTGAGAAACGTAGACGACACTATGGTCACGCTGAACGGCGACGAGATCAGCCCCGAGAACGT CAGCGACCGCGTCAAGAAACCGCAGGGCAAGGGAGAGCAGCAGCAGGGCGACAAGGGCAAAGGCCCGCAGGGCTCCGGCA AGCAGCGCCGCAACAGGCCCCAGGACGTTAAGGAAAGAAAAAAGGAGAAACCACAATGA
Upstream 100 bases:
>100_bases GAAGCGCCTGATGCCGGCTTGGCCGGCGGGCAATGCAGCACCCAGACACAGCAAACGACAGGACCTCAGACCACGGCCTG TTTCTCTTTTGGAGGATTTT
Downstream 100 bases:
>100_bases AGCCCGCCTACTACGTCACCACCCCCATCTACTACGTAAACGACGTCCCGCACATAGGCCACGCATACACCACGCTTGCC GCGGACGTACTGGCGCGCTA
Product: PSP1 superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MAKIARIQFNTAGKLYDFTLGKTTVKPGDRVIVETERGKSIGQVVAGPIEVDDALVPEGIKPVQRLAEASDLATLATNTA KEKEAHKFCLTRIKERGMDMKLVRVEYLFDGSKAIFYFTADGRVDFRELVKDLAHAFHTRIEMRQIGVRDESKMVGGIGI CGRELCCSSYLREFEPVSVKMAKEQNLALNPSKISGQCGRLLCCLSYEFDTYCSLRKGLPKCGKRVQCGCVDGEVVKVNV LQQTVTVRNVDDTMVTLNGDEISPENVSDRVKKPQGKGEQQQGDKGKGPQGSGKQRRNRPQDVKERKKEKPQ
Sequences:
>Translated_312_residues MAKIARIQFNTAGKLYDFTLGKTTVKPGDRVIVETERGKSIGQVVAGPIEVDDALVPEGIKPVQRLAEASDLATLATNTA KEKEAHKFCLTRIKERGMDMKLVRVEYLFDGSKAIFYFTADGRVDFRELVKDLAHAFHTRIEMRQIGVRDESKMVGGIGI CGRELCCSSYLREFEPVSVKMAKEQNLALNPSKISGQCGRLLCCLSYEFDTYCSLRKGLPKCGKRVQCGCVDGEVVKVNV LQQTVTVRNVDDTMVTLNGDEISPENVSDRVKKPQGKGEQQQGDKGKGPQGSGKQRRNRPQDVKERKKEKPQ >Mature_311_residues AKIARIQFNTAGKLYDFTLGKTTVKPGDRVIVETERGKSIGQVVAGPIEVDDALVPEGIKPVQRLAEASDLATLATNTAK EKEAHKFCLTRIKERGMDMKLVRVEYLFDGSKAIFYFTADGRVDFRELVKDLAHAFHTRIEMRQIGVRDESKMVGGIGIC GRELCCSSYLREFEPVSVKMAKEQNLALNPSKISGQCGRLLCCLSYEFDTYCSLRKGLPKCGKRVQCGCVDGEVVKVNVL QQTVTVRNVDDTMVTLNGDEISPENVSDRVKKPQGKGEQQQGDKGKGPQGSGKQRRNRPQDVKERKKEKPQ
Specific function: Essential for the phosphorelay during initiation of sporulation. May control the level of phosphorylated spo0A through spo0E activity during sporulation [H]
COG id: COG1774
COG function: function code S; Uncharacterized homolog of PSP1
Gene ontology:
Cell location: Cytoplasm. Note=In the vegetative phase, localized throughout the periphery of the cell and the division septum. In the sporulation stages, fluorescence of the yaaT-GFP fusion protein was observed as two dots at the sides of an asymmetric septum and at th
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PSP1 C-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007557 [H]
Pfam domain/function: PF04468 PSP1 [H]
EC number: NA
Molecular weight: Translated: 34674; Mature: 34543
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIARIQFNTAGKLYDFTLGKTTVKPGDRVIVETERGKSIGQVVAGPIEVDDALVPEGI CCCEEEEEECCCCCEEEEECCCEEECCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCC KPVQRLAEASDLATLATNTAKEKEAHKFCLTRIKERGMDMKLVRVEYLFDGSKAIFYFTA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEE DGRVDFRELVKDLAHAFHTRIEMRQIGVRDESKMVGGIGICGRELCCSSYLREFEPVSVK CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEE MAKEQNLALNPSKISGQCGRLLCCLSYEFDTYCSLRKGLPKCGKRVQCGCVDGEVVKVNV EECCCCCCCCCHHHCCCCCEEEEEEECCHHHHHHHHHCHHHHCCEEEEEECCCCEEEEEE LQQTVTVRNVDDTMVTLNGDEISPENVSDRVKKPQGKGEQQQGDKGKGPQGSGKQRRNRP EEHHHEEEECCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCC QDVKERKKEKPQ HHHHHHHHCCCC >Mature Secondary Structure AKIARIQFNTAGKLYDFTLGKTTVKPGDRVIVETERGKSIGQVVAGPIEVDDALVPEGI CCEEEEEECCCCCEEEEECCCEEECCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCC KPVQRLAEASDLATLATNTAKEKEAHKFCLTRIKERGMDMKLVRVEYLFDGSKAIFYFTA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEE DGRVDFRELVKDLAHAFHTRIEMRQIGVRDESKMVGGIGICGRELCCSSYLREFEPVSVK CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEE MAKEQNLALNPSKISGQCGRLLCCLSYEFDTYCSLRKGLPKCGKRVQCGCVDGEVVKVNV EECCCCCCCCCHHHCCCCCEEEEEEECCHHHHHHHHHCHHHHCCEEEEEECCCCEEEEEE LQQTVTVRNVDDTMVTLNGDEISPENVSDRVKKPQGKGEQQQGDKGKGPQGSGKQRRNRP EEHHHEEEECCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCC QDVKERKKEKPQ HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]