| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yeaC [H]
Identifier: 197118193
GI number: 197118193
Start: 2093136
End: 2094125
Strand: Direct
Name: yeaC [H]
Synonym: Gbem_1808
Alternate gene names: 197118193
Gene position: 2093136-2094125 (Clockwise)
Preceding gene: 197118192
Following gene: 197118194
Centisome position: 45.35
GC content: 65.96
Gene sequence:
>990_bases ATGAGCGTCAATGGGAACCTGGCCGAGCGCGTGCAGCAGGAATCCGCTTTTCTGGCAGGCGTCGTCTCCGCGGTGGAAAA CGTGGTCGTGGGGCAGCGCCCGCTCATCGAACGGATCCTGGTCGCGCTTTTGTCCAACGGCCACCTCCTGATCGAGGGGG TTCCGGGGCTCGCCAAGACCACCCTGGTCAAGACCCTCGCCTCCCTGATCGACGCCCGGTTCCAGCGCATCCAGTTCACT CCCGACCTCCTTCCCGCCGACCTTTTGGGGACCCTGGTGTACAACCCGCGCGAGGGCGATTTCACTACCCGCAAGGGGCC GATCTTCACCAACATCCTCCTCGCTGACGAGATCAACCGCGCCCCCGCCAAGGTGCACAGCGCGCTCCTGGAAGCGATGG AGGAGCGCCAGGTGACCATCAGCGACAGCTCCTACCCGCTTTCCGAGCCGTTCCTGGTCATGGCTACCCAGAACCCCATC GAGCAGGAGGGGACCTACCCGCTCCCCGAGGCGCAGATGGACCGCTTCATGCTCAAGGCGAAGGTGGGATACCCCAGCCG CGCCGACGAGCTGGAGATCATGCGCCGCACCGCCCGCACCTCCCGCAGCTTTTCCGCCGCACCTCTCATCCACCCCGACG ACATCCTGCGCGCCCGGGCGCTGGTGGACGACATCTACCTGGACCCGAAGATCGAGAAGTACATCCTCGACCTGGTGCTC GCCACCCGCGACCCGGAAAGCTACGGCTTCGCCGATCTCGCCGGCCTCATCGCCTACGGTGCCTCGCCCAGAGCGAGCAT CTACCTCTGCATCGCCTCCCGCGCCCTGGCCCTTTTGCGCGGCCGAGGCTACGTGGTGCCGCAGGACGTGAAGGAGATAG GGCCGGATCTCTTGCGCCACCGCATCATTGTGAGCTACGAGGCGGACGCCCAGGGGGTGGGGGTGGAGGGGATCGTGGAA GAGCTCTTTTCCCGGACCGAGGTGCCATGA
Upstream 100 bases:
>100_bases CATGAAGGCGGCCGAGGAACTCGGGGTGAGCCGCCCGACGCTGTACGACCTGATGAAGAAGCTCTCCATCCACCCGTAGG CAGACGAAGAAAGGTAACGC
Downstream 100 bases:
>100_bases CCGCCCAGGCTCCCTCCCCAGACCAGCTGCGCCGCCTGCGGGTACTTTCCTCCCGCCTGGTTACCGGGCTCTTCGCCGGG GAGTACCGGAGCGTCTTTAA
Product: ATPase AAA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSVNGNLAERVQQESAFLAGVVSAVENVVVGQRPLIERILVALLSNGHLLIEGVPGLAKTTLVKTLASLIDARFQRIQFT PDLLPADLLGTLVYNPREGDFTTRKGPIFTNILLADEINRAPAKVHSALLEAMEERQVTISDSSYPLSEPFLVMATQNPI EQEGTYPLPEAQMDRFMLKAKVGYPSRADELEIMRRTARTSRSFSAAPLIHPDDILRARALVDDIYLDPKIEKYILDLVL ATRDPESYGFADLAGLIAYGASPRASIYLCIASRALALLRGRGYVVPQDVKEIGPDLLRHRIIVSYEADAQGVGVEGIVE ELFSRTEVP
Sequences:
>Translated_329_residues MSVNGNLAERVQQESAFLAGVVSAVENVVVGQRPLIERILVALLSNGHLLIEGVPGLAKTTLVKTLASLIDARFQRIQFT PDLLPADLLGTLVYNPREGDFTTRKGPIFTNILLADEINRAPAKVHSALLEAMEERQVTISDSSYPLSEPFLVMATQNPI EQEGTYPLPEAQMDRFMLKAKVGYPSRADELEIMRRTARTSRSFSAAPLIHPDDILRARALVDDIYLDPKIEKYILDLVL ATRDPESYGFADLAGLIAYGASPRASIYLCIASRALALLRGRGYVVPQDVKEIGPDLLRHRIIVSYEADAQGVGVEGIVE ELFSRTEVP >Mature_328_residues SVNGNLAERVQQESAFLAGVVSAVENVVVGQRPLIERILVALLSNGHLLIEGVPGLAKTTLVKTLASLIDARFQRIQFTP DLLPADLLGTLVYNPREGDFTTRKGPIFTNILLADEINRAPAKVHSALLEAMEERQVTISDSSYPLSEPFLVMATQNPIE QEGTYPLPEAQMDRFMLKAKVGYPSRADELEIMRRTARTSRSFSAAPLIHPDDILRARALVDDIYLDPKIEKYILDLVLA TRDPESYGFADLAGLIAYGASPRASIYLCIASRALALLRGRGYVVPQDVKEIGPDLLRHRIIVSYEADAQGVGVEGIVEE LFSRTEVP
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36178; Mature: 36047
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNGNLAERVQQESAFLAGVVSAVENVVVGQRPLIERILVALLSNGHLLIEGVPGLAKT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCHHHH TLVKTLASLIDARFQRIQFTPDLLPADLLGTLVYNPREGDFTTRKGPIFTNILLADEINR HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCC APAKVHSALLEAMEERQVTISDSSYPLSEPFLVMATQNPIEQEGTYPLPEAQMDRFMLKA CHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH KVGYPSRADELEIMRRTARTSRSFSAAPLIHPDDILRARALVDDIYLDPKIEKYILDLVL HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ATRDPESYGFADLAGLIAYGASPRASIYLCIASRALALLRGRGYVVPQDVKEIGPDLLRH HCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHC RIIVSYEADAQGVGVEGIVEELFSRTEVP EEEEEEECCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SVNGNLAERVQQESAFLAGVVSAVENVVVGQRPLIERILVALLSNGHLLIEGVPGLAKT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCHHHH TLVKTLASLIDARFQRIQFTPDLLPADLLGTLVYNPREGDFTTRKGPIFTNILLADEINR HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCC APAKVHSALLEAMEERQVTISDSSYPLSEPFLVMATQNPIEQEGTYPLPEAQMDRFMLKA CHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH KVGYPSRADELEIMRRTARTSRSFSAAPLIHPDDILRARALVDDIYLDPKIEKYILDLVL HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ATRDPESYGFADLAGLIAYGASPRASIYLCIASRALALLRGRGYVVPQDVKEIGPDLLRH HCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHC RIIVSYEADAQGVGVEGIVEELFSRTEVP EEEEEEECCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]