| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is epsH
Identifier: 197118188
GI number: 197118188
Start: 2086767
End: 2087612
Strand: Direct
Name: epsH
Synonym: Gbem_1803
Alternate gene names: NA
Gene position: 2086767-2087612 (Clockwise)
Preceding gene: 197118184
Following gene: 197118189
Centisome position: 45.22
GC content: 60.76
Gene sequence:
>846_bases ATGACAGTCGCCGAGTGTTTGAAACATCACAGGGTGCAGTTTCTTTTGGTGCTGTTGATACTGGCCGCCGTTTACTGGAG CGTTGTGCCTGAGATGGTTCAGCAGTGGTACGAGGACGAGAACTATTCCCACGGTTTCGTCGTCCCCCTGATCGCCGGGT ATTTCGCCTACGAGCGCCGCAAGGATCTGGCCTCCGTGCTGGCCGAGCCTTGGTGGCCCGGGCTTTTGCTGGTGGTCGCC GGCCTTATGCAACTGGTGGTGGGTTGGCTTGGCACCGAATTTTTCACCATGCGCAGTTCCCTTGTGGTCACCCTTTGCGG GATGACCCTTTTTTTATTGGGAAAGAGGCTGTTCCGGCTCATGCTGCTGCCGCTTGCCTACCTCCTTTTCATGGTGCCGC TCCCCTACATCATCTACGACATGGTTGCCTTCCCCCTGAAACTATTCGTGACCCGCGTCTCCATAGCGACGCTGAAGCTC ATGGGGGTGGTGGTGATGAGGGAGGGGAACATCATCATGCTCCCCTTCACCACGCTGGAGGTAGCCGACGCCTGCAGCGG CATCAGGTCGCTCATCTCGCTCCTCGCGCTTGCGGTCGCCTACGCCTTCTTCCTGGAGATGGGGCAGTTGCGCCGGGGCC TGCTGATCCTCGCTGCCATACCTATCGCCATATCGGCCAACGCGCTCAGGGTGATCGGTACGGGGGTCCTGGCCCAGTAC TGGGGCGCCAGGGCCGCGGAAGGGTTCTTCCACGAGTTCGCGGGGCTCGCGGTCTTCGTGGTCGCCATCGCGCTCATGAT CGGGCTCGGCTCTTTGCTGTCGCGCGGTAAAGGGGGTGCGGCATGA
Upstream 100 bases:
>100_bases TGAATTAATACTTGTCAATTTGTCCTTCACACTGTAAAGTGTAGCATCCAAAATCGACCCTGTTATTAGCCCACCTGTTG CGGATTCGAGGTTATCTCCA
Downstream 100 bases:
>100_bases AGGCGCATTTCCTGGCGATCTACCTGCTTCTCGTTGCGGCCGGTCTTTACCTGCACCTGCACAGCGACCTGAGCGTCCCC ATCAACCGCCCCTTGCAGCA
Product: exopolysaccharide synthesis multitransmembrane protein H
Products: NA
Alternate protein names: Exopolysaccharide Synthesis Multitransmembrane Protein H; Methanolan Biosynthesis EpsI Protein; EpsI Family Protein
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTVAECLKHHRVQFLLVLLILAAVYWSVVPEMVQQWYEDENYSHGFVVPLIAGYFAYERRKDLASVLAEPWWPGLLLVVA GLMQLVVGWLGTEFFTMRSSLVVTLCGMTLFLLGKRLFRLMLLPLAYLLFMVPLPYIIYDMVAFPLKLFVTRVSIATLKL MGVVVMREGNIIMLPFTTLEVADACSGIRSLISLLALAVAYAFFLEMGQLRRGLLILAAIPIAISANALRVIGTGVLAQY WGARAAEGFFHEFAGLAVFVVAIALMIGLGSLLSRGKGGAA
Sequences:
>Translated_281_residues MTVAECLKHHRVQFLLVLLILAAVYWSVVPEMVQQWYEDENYSHGFVVPLIAGYFAYERRKDLASVLAEPWWPGLLLVVA GLMQLVVGWLGTEFFTMRSSLVVTLCGMTLFLLGKRLFRLMLLPLAYLLFMVPLPYIIYDMVAFPLKLFVTRVSIATLKL MGVVVMREGNIIMLPFTTLEVADACSGIRSLISLLALAVAYAFFLEMGQLRRGLLILAAIPIAISANALRVIGTGVLAQY WGARAAEGFFHEFAGLAVFVVAIALMIGLGSLLSRGKGGAA >Mature_280_residues TVAECLKHHRVQFLLVLLILAAVYWSVVPEMVQQWYEDENYSHGFVVPLIAGYFAYERRKDLASVLAEPWWPGLLLVVAG LMQLVVGWLGTEFFTMRSSLVVTLCGMTLFLLGKRLFRLMLLPLAYLLFMVPLPYIIYDMVAFPLKLFVTRVSIATLKLM GVVVMREGNIIMLPFTTLEVADACSGIRSLISLLALAVAYAFFLEMGQLRRGLLILAAIPIAISANALRVIGTGVLAQYW GARAAEGFFHEFAGLAVFVVAIALMIGLGSLLSRGKGGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30966; Mature: 30835
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAECLKHHRVQFLLVLLILAAVYWSVVPEMVQQWYEDENYSHGFVVPLIAGYFAYERR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH KDLASVLAEPWWPGLLLVVAGLMQLVVGWLGTEFFTMRSSLVVTLCGMTLFLLGKRLFRL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLPLAYLLFMVPLPYIIYDMVAFPLKLFVTRVSIATLKLMGVVVMREGNIIMLPFTTLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEHHHHH VADACSGIRSLISLLALAVAYAFFLEMGQLRRGLLILAAIPIAISANALRVIGTGVLAQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WGARAAEGFFHEFAGLAVFVVAIALMIGLGSLLSRGKGGAA HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TVAECLKHHRVQFLLVLLILAAVYWSVVPEMVQQWYEDENYSHGFVVPLIAGYFAYERR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH KDLASVLAEPWWPGLLLVVAGLMQLVVGWLGTEFFTMRSSLVVTLCGMTLFLLGKRLFRL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLPLAYLLFMVPLPYIIYDMVAFPLKLFVTRVSIATLKLMGVVVMREGNIIMLPFTTLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEHHHHH VADACSGIRSLISLLALAVAYAFFLEMGQLRRGLLILAAIPIAISANALRVIGTGVLAQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WGARAAEGFFHEFAGLAVFVVAIALMIGLGSLLSRGKGGAA HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA