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The map label for this gene is yibD [C]

Identifier: 197118179

GI number: 197118179

Start: 2071708

End: 2072655

Strand: Direct

Name: yibD [C]

Synonym: Gbem_1794

Alternate gene names: 197118179

Gene position: 2071708-2072655 (Clockwise)

Preceding gene: 197118178

Following gene: 197118180

Centisome position: 44.89

GC content: 61.92

Gene sequence:

>948_bases
ATGGAAGTTCTTTTCGTATCAGTGATAATACCGGTCTTCAATGCGCACAGAACCCTCGACTCCTGCCTGCAGAGCATCCT
CGCCTGCGACTACCTTCGCGACAGTTTCGAGGTGATCGTCGTCGACAACTGCTCAACCGACGACTCCGCCGAGATAGCCC
GGCGCTACCCGGTGACGCTGACCACGAAAATCGGGGGGACCATCAGTTCGGTCAGAAACCACGGCGTAAGCCTCGCGCGG
GGCTCGGTCCTGGGTTTTGTCGACAGCGACTGCATCGTCGCTTCCGACTGGCTTTCGGAGGTGGTCAAGGTCCTGCAGCT
TCAAGGCGCCGGGGCGGCGGGTTCGGGTTACCTGGTCCCGGAGCGCTACACCTGGGTCGAGAAGGCCTGGCTCTACGAGC
GGGGGGGGGGAACCTACCAGACCGGGCTGGTCCCCGGCGGGAACTGCGCGTTCAAGGCGGAGTTGTTCCAAGCGATCGGC
GGCTTCGACGAGGGGCTCACCACCGGCGAGGACTCCGACATCTGCAGGCGCGTGATCGAGGCGGGATACAAGGTGATCGG
CTCGGGTTCCATACGCTGCGTGCACCTGGGCAACTCGAAGACGCTCAGGCAGTTCGCCAGGAAGGAGTTCTGGTACGGCA
TCGACATGGTGAAGGACCTGCGGGTCACCTCGTTCGACGGCACCTTTTTCATGACTGCCGTTTTTCTGCTCGGCTTCGCG
TCTTTCACCGCGGCGCTGCTGCTGACCCTGGCGACGGGGAGGCAGTCGCCGCTTTTGTACTCCCCACTGGCCATGCTCGC
CGTAAGCGCCGTCTGCTCGGGATACCGGGTCCGGCGGTCGAGGAAATACCGGTATTACTTTCACCTGGTCGTTTTGTACT
TCCTTTACTTTTGCTCCCGTTCCTGCGCCGTGGTGAGCTCGGTGCTGAAGAGCTCGAGAACCACGTGA

Upstream 100 bases:

>100_bases
TAGATCGGATCGAGCGCAGCAAGTCCGGCAAACTGAGATATTTCGAAAGGAAAATCAACTAGCGCTCGCCGAGGCTTGCG
AGCTGCGCAATGGGATAGCC

Downstream 100 bases:

>100_bases
AGCATGCACCTCAAACCGGGCGCCCTCCCGGATCTTTTGCCTGCTACGGATCTTTCCGTAGCCCGAGGTCGTTTTTATGA
ATCTGATAGAAAAAAGCGCA

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Dolichyl-Phosphate Mannose Synthase Related Protein; Glycosyl Transferase Family 2 Protein; Sugar Transferase; Glycosyltransferase AglE; Glucosaminyltransferase; Family 2 Glycosyl Transferase; Membrane Sugar Transferase; Glycosyl Transferase GT2 Family; Glycoside Hydrolase Family 2 Protein; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Beta-1 3-Galactosyltransferase; Methyltransferase And Glycosyltransferase; Glycosyl Transferase Group 2 Family; Family 2 Glycosyltransferase; Family Glycosyltransferase; Dolichyl-Phosphate Mannose Synthase-Like Protein; Exopolysaccharide Biosynthesis Protein Sugar Transferase; Ss-1 4-Galactosyltransferase

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MEVLFVSVIIPVFNAHRTLDSCLQSILACDYLRDSFEVIVVDNCSTDDSAEIARRYPVTLTTKIGGTISSVRNHGVSLAR
GSVLGFVDSDCIVASDWLSEVVKVLQLQGAGAAGSGYLVPERYTWVEKAWLYERGGGTYQTGLVPGGNCAFKAELFQAIG
GFDEGLTTGEDSDICRRVIEAGYKVIGSGSIRCVHLGNSKTLRQFARKEFWYGIDMVKDLRVTSFDGTFFMTAVFLLGFA
SFTAALLLTLATGRQSPLLYSPLAMLAVSAVCSGYRVRRSRKYRYYFHLVVLYFLYFCSRSCAVVSSVLKSSRTT

Sequences:

>Translated_315_residues
MEVLFVSVIIPVFNAHRTLDSCLQSILACDYLRDSFEVIVVDNCSTDDSAEIARRYPVTLTTKIGGTISSVRNHGVSLAR
GSVLGFVDSDCIVASDWLSEVVKVLQLQGAGAAGSGYLVPERYTWVEKAWLYERGGGTYQTGLVPGGNCAFKAELFQAIG
GFDEGLTTGEDSDICRRVIEAGYKVIGSGSIRCVHLGNSKTLRQFARKEFWYGIDMVKDLRVTSFDGTFFMTAVFLLGFA
SFTAALLLTLATGRQSPLLYSPLAMLAVSAVCSGYRVRRSRKYRYYFHLVVLYFLYFCSRSCAVVSSVLKSSRTT
>Mature_315_residues
MEVLFVSVIIPVFNAHRTLDSCLQSILACDYLRDSFEVIVVDNCSTDDSAEIARRYPVTLTTKIGGTISSVRNHGVSLAR
GSVLGFVDSDCIVASDWLSEVVKVLQLQGAGAAGSGYLVPERYTWVEKAWLYERGGGTYQTGLVPGGNCAFKAELFQAIG
GFDEGLTTGEDSDICRRVIEAGYKVIGSGSIRCVHLGNSKTLRQFARKEFWYGIDMVKDLRVTSFDGTFFMTAVFLLGFA
SFTAALLLTLATGRQSPLLYSPLAMLAVSAVCSGYRVRRSRKYRYYFHLVVLYFLYFCSRSCAVVSSVLKSSRTT

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34623; Mature: 34623

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVLFVSVIIPVFNAHRTLDSCLQSILACDYLRDSFEVIVVDNCSTDDSAEIARRYPVTL
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCEEE
TTKIGGTISSVRNHGVSLARGSVLGFVDSDCIVASDWLSEVVKVLQLQGAGAAGSGYLVP
EEECCCHHHHHHHCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCC
ERYTWVEKAWLYERGGGTYQTGLVPGGNCAFKAELFQAIGGFDEGLTTGEDSDICRRVIE
CHHHHHHHHHHEECCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
AGYKVIGSGSIRCVHLGNSKTLRQFARKEFWYGIDMVKDLRVTSFDGTFFMTAVFLLGFA
CCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHH
SFTAALLLTLATGRQSPLLYSPLAMLAVSAVCSGYRVRRSRKYRYYFHLVVLYFLYFCSR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
SCAVVSSVLKSSRTT
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MEVLFVSVIIPVFNAHRTLDSCLQSILACDYLRDSFEVIVVDNCSTDDSAEIARRYPVTL
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCEEE
TTKIGGTISSVRNHGVSLARGSVLGFVDSDCIVASDWLSEVVKVLQLQGAGAAGSGYLVP
EEECCCHHHHHHHCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCC
ERYTWVEKAWLYERGGGTYQTGLVPGGNCAFKAELFQAIGGFDEGLTTGEDSDICRRVIE
CHHHHHHHHHHEECCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
AGYKVIGSGSIRCVHLGNSKTLRQFARKEFWYGIDMVKDLRVTSFDGTFFMTAVFLLGFA
CCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHH
SFTAALLLTLATGRQSPLLYSPLAMLAVSAVCSGYRVRRSRKYRYYFHLVVLYFLYFCSR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
SCAVVSSVLKSSRTT
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA