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The map label for this gene is 197117219

Identifier: 197117219

GI number: 197117219

Start: 978278

End: 979147

Strand: Direct

Name: 197117219

Synonym: Gbem_0827

Alternate gene names: NA

Gene position: 978278-979147 (Clockwise)

Preceding gene: 197117218

Following gene: 197117223

Centisome position: 21.2

GC content: 62.76

Gene sequence:

>870_bases
ATGGCCAGAAGATCTGATCTGAAAAAGAGTGAACTTCCTGGATGGCTCAGCACCATGTTGATCTTCGGCACCATGGCGGC
GGTGGTCGTCATGGAGTTGAAGCGGCCGCTCCGGAAGGAACGGGAGGACAAGGTCTCCCGCAATATGCGAAACGCCACCT
TAGCCCTGCTCGCGGCGGCAACGGTCGGCCTTGCCGAAAAGCCGGTGGTGGCGCCTCTGGCCCTGGCGGTGCATAAAAAA
CGTCTCGGGTTCCTGAAGCTGTACCGGCTCCCGGTCTGGGCCGACCTGATGCTTTCCGTGTTGCTGCTCGACTACACCCT
CTATATCTGGCACTACCTGACCCACAAGGTGCCTTTTCTGTGGCGCTTCCACCGCCCCCACCACGTGGACCGCGACCTGG
ACGCCAGCACCGCCCTGCGCTTTCACTTCGGCGAATTATTGCTGTCGGTTCCCTGGCGCGCCGCGCAGGTGAGCCTGCTC
GGCGTCTCGCCGCTTGGGCTCGCGCTCTGGCAGACGCTTACCCTGGTGGAGATCATGTTCCACCACTCGAACCTGCGGCT
CCCCTTCGCTTGGGAGCGTCGCCTCTGCCGGCTCATCGTCACCCCCCGCATGCACGGGATCCATCATTCGGTGGTTCGCG
GCGAAACCGATTCCAACTGGGGCACCATTTTTTCCTGGCCCGATTACCTGCACGGGACCGTGCGGCTGAACGTCCTGCAG
GACAGCATAGACATAGGTGTGGTCGGCTATCAGGACCCGGCGCAGCTGACCCTGGGAAATGTTTTGGCCATGCCGTTCCA
ACCCGAGATCAAGGCCATTGCTCCGGAAGGGCGGCTGCTGCCCGTCCCGAGGACCGCGCTGGCGCCGTGA

Upstream 100 bases:

>100_bases
TGAAAGAGATGGGAAACCACATCGCCTGGAGTGCCGCGGCGGAGTGGGTGCATCGCCTGGCGGCCCGGATGCGCTAGCAC
AAAACGGGGAGGGGGGAGCG

Downstream 100 bases:

>100_bases
CGGTTGCCCCAAGAGGAAACAAAAAGAGACCCGGGTCGAGCTTCGACCCGGGTCTCTTCGTTTATCCGTTGCCGATGGTG
CAGTCACGCCAGCGGCCCCC

Product: fatty acid hydroxylase superfamily protein

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase-Related Protein; Sterol Desaturase-Like Protein; Transmembrane Protein; C-5 Sterol Desaturase; Sterol Desaturase -Like Protein; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase-Like; Sterol Desaturase Family Protein; Sterol Desaturate; Fatty Acid Hydroxylase Superfamily Protein; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MARRSDLKKSELPGWLSTMLIFGTMAAVVVMELKRPLRKEREDKVSRNMRNATLALLAAATVGLAEKPVVAPLALAVHKK
RLGFLKLYRLPVWADLMLSVLLLDYTLYIWHYLTHKVPFLWRFHRPHHVDRDLDASTALRFHFGELLLSVPWRAAQVSLL
GVSPLGLALWQTLTLVEIMFHHSNLRLPFAWERRLCRLIVTPRMHGIHHSVVRGETDSNWGTIFSWPDYLHGTVRLNVLQ
DSIDIGVVGYQDPAQLTLGNVLAMPFQPEIKAIAPEGRLLPVPRTALAP

Sequences:

>Translated_289_residues
MARRSDLKKSELPGWLSTMLIFGTMAAVVVMELKRPLRKEREDKVSRNMRNATLALLAAATVGLAEKPVVAPLALAVHKK
RLGFLKLYRLPVWADLMLSVLLLDYTLYIWHYLTHKVPFLWRFHRPHHVDRDLDASTALRFHFGELLLSVPWRAAQVSLL
GVSPLGLALWQTLTLVEIMFHHSNLRLPFAWERRLCRLIVTPRMHGIHHSVVRGETDSNWGTIFSWPDYLHGTVRLNVLQ
DSIDIGVVGYQDPAQLTLGNVLAMPFQPEIKAIAPEGRLLPVPRTALAP
>Mature_288_residues
ARRSDLKKSELPGWLSTMLIFGTMAAVVVMELKRPLRKEREDKVSRNMRNATLALLAAATVGLAEKPVVAPLALAVHKKR
LGFLKLYRLPVWADLMLSVLLLDYTLYIWHYLTHKVPFLWRFHRPHHVDRDLDASTALRFHFGELLLSVPWRAAQVSLLG
VSPLGLALWQTLTLVEIMFHHSNLRLPFAWERRLCRLIVTPRMHGIHHSVVRGETDSNWGTIFSWPDYLHGTVRLNVLQD
SIDIGVVGYQDPAQLTLGNVLAMPFQPEIKAIAPEGRLLPVPRTALAP

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32837; Mature: 32706

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRSDLKKSELPGWLSTMLIFGTMAAVVVMELKRPLRKEREDKVSRNMRNATLALLAAA
CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVGLAEKPVVAPLALAVHKKRLGFLKLYRLPVWADLMLSVLLLDYTLYIWHYLTHKVPFL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
WRFHRPHHVDRDLDASTALRFHFGELLLSVPWRAAQVSLLGVSPLGLALWQTLTLVEIMF
EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHHHHHHH
HHSNLRLPFAWERRLCRLIVTPRMHGIHHSVVRGETDSNWGTIFSWPDYLHGTVRLNVLQ
HCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEECHHHHCCEEEEEEEE
DSIDIGVVGYQDPAQLTLGNVLAMPFQPEIKAIAPEGRLLPVPRTALAP
CCCCEEEECCCCCCCEECCCEEECCCCCCCEEECCCCCEECCCHHHCCC
>Mature Secondary Structure 
ARRSDLKKSELPGWLSTMLIFGTMAAVVVMELKRPLRKEREDKVSRNMRNATLALLAAA
CCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVGLAEKPVVAPLALAVHKKRLGFLKLYRLPVWADLMLSVLLLDYTLYIWHYLTHKVPFL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
WRFHRPHHVDRDLDASTALRFHFGELLLSVPWRAAQVSLLGVSPLGLALWQTLTLVEIMF
EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHHHHHHH
HHSNLRLPFAWERRLCRLIVTPRMHGIHHSVVRGETDSNWGTIFSWPDYLHGTVRLNVLQ
HCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEECHHHHCCEEEEEEEE
DSIDIGVVGYQDPAQLTLGNVLAMPFQPEIKAIAPEGRLLPVPRTALAP
CCCCEEEECCCCCCCEECCCEEECCCCCCCEEECCCCCEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA